Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC009533.1 Gene 0 10.95 2.05 13.64 8.46 0.38 0.53 3.62 10.73 4.76 13.26 0.56 2.16 1.11 8.76 7.13 8.97 9.96 24.12 2.74 10.09 1.58 1.50 3.38 2 500906 Transcript 0 5.61 1.05 7.00 4.34 0.20 0.27 1.85 5.50 2.44 6.79 0.28 1.11 0.57 4.49 3.65 4.59 5.10 12.37 1.41 5.17 0.81 0.77 1.73 3 IG2_SR26 SilentIntergenicRegion 0 5.50 12.92 30.68 23.74 18.13 8.46 20.86 45.22 11.42 46.12 9.71 4.09 2.75 13.17 4.60 3.22 8.70 75.27 11.24 30.43 0.35 1.25 4.11 4 IG2_AR28 ActiveIntergenicRegion 0 22.01 22.00 93.71 72.95 38.48 15.28 49.60 146.70 34.84 123.91 15.67 9.54 3.81 14.68 4.60 11.33 20.33 167.15 27.08 51.16 0.00 2.81 2.17 5 IG2_SR25 SilentIntergenicRegion 0 12.37 22.24 63.74 42.32 28.88 17.18 41.84 74.60 18.39 63.11 18.28 10.53 5.77 20.58 7.37 8.03 9.96 136.54 17.28 39.37 0.47 2.48 4.97 6 IG2_AR27 ActiveIntergenicRegion 0 14.35 30.89 62.77 55.62 28.63 8.62 34.49 122.21 13.87 80.91 24.50 19.45 8.48 37.01 10.67 8.92 5.27 116.73 23.33 40.89 0.16 3.68 4.79 7 IG2_SR23 SilentIntergenicRegion 0 10.40 10.06 45.75 24.33 15.90 7.14 17.94 34.73 7.34 41.66 9.61 2.79 2.92 14.89 4.14 4.87 7.77 94.00 14.01 27.68 0.83 1.63 2.10 8 IG2_AR25 ActiveIntergenicRegion 0 19.05 55.14 76.12 46.61 62.09 24.64 66.51 49.10 16.72 59.86 32.80 6.02 3.94 26.79 15.14 10.12 11.24 144.18 22.02 58.56 1.02 1.54 5.66 9 IG2_SR22 SilentIntergenicRegion 0 14.37 18.01 15.44 20.92 19.19 14.04 21.68 36.27 7.46 40.93 10.83 5.23 3.50 15.95 5.07 5.88 5.93 60.91 8.22 32.76 0.00 1.06 2.70 10 IG2_AR24 ActiveIntergenicRegion 0 24.32 39.82 47.08 58.28 50.17 17.57 36.35 88.24 15.83 80.27 20.16 16.33 9.72 30.32 8.24 7.04 18.00 122.09 26.03 57.72 0.41 0.57 2.70 11 IG2_SR21 SilentIntergenicRegion 0 3.47 4.77 10.01 8.26 10.89 3.98 12.24 11.51 4.19 27.06 2.06 8.83 7.61 3.79 1.55 1.85 4.30 10.86 3.28 15.62 0.00 0.51 0.73 12 IG2_AR23 ActiveIntergenicRegion 0 25.04 49.58 47.97 54.12 37.38 11.53 39.17 58.77 15.14 36.52 8.29 3.87 8.83 25.45 6.02 6.45 4.49 87.96 22.47 45.56 0.89 4.34 0.00 13 IG2_AR17 ActiveIntergenicRegion 0 9.13 52.33 1.43 27.52 39.62 0.00 22.62 30.13 0.00 0.00 5.29 2.80 3.03 10.34 6.70 0.00 0.00 19.12 2.50 0.83 0.00 15.37 11.43 14 IG2_AR13 ActiveIntergenicRegion 0 15.22 7.76 19.69 12.68 19.72 5.62 17.06 18.11 4.14 37.36 2.79 1.70 2.51 3.90 1.14 0.85 1.49 5.99 1.42 8.00 0.58 7.54 6.35 15 IG2_SR2 SilentIntergenicRegion 0 2.69 21.52 20.34 2.35 12.26 8.34 15.12 17.79 7.70 19.46 6.33 3.31 0.00 8.74 1.53 3.35 0.96 24.09 3.36 22.98 0.00 1.93 1.55 16 IG2_AR3 ActiveIntergenicRegion 0 2.64 9.96 16.99 11.43 9.86 4.48 11.78 28.38 7.89 49.12 5.94 1.07 1.68 10.31 3.38 3.72 5.29 41.25 7.32 29.42 0.00 1.25 2.24 17 IG2_AR2 ActiveIntergenicRegion 0 0.71 9.39 34.64 17.53 12.63 7.40 12.27 24.06 7.45 73.67 4.76 8.03 1.90 11.51 9.94 5.74 12.28 46.24 14.21 33.42 0.00 0.68 0.56 18 IG2_SR1 SilentIntergenicRegion 0 5.37 10.69 29.58 20.15 15.16 5.70 19.51 34.08 10.78 51.33 5.31 4.06 2.49 9.47 4.55 3.62 8.26 51.21 13.78 26.34 0.11 1.06 2.44 19 IG2_AR1 ActiveIntergenicRegion 0 9.38 6.09 20.07 14.74 9.39 6.73 10.73 19.13 9.99 32.10 5.82 1.93 2.12 10.29 7.95 8.14 10.37 31.54 11.27 15.17 1.47 0.97 4.80 20 ER1a ExonRegion 0 16.82 3.14 20.93 13.00 0.59 0.81 5.56 16.49 7.31 20.37 0.85 3.32 1.71 13.44 10.96 13.78 15.30 37.02 4.16 15.50 2.43 2.30 5.19 21 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 Ix Intron 0 6.03 3.48 10.41 2.89 3.81 2.09 3.39 4.40 0.52 5.83 1.10 0.00 0.00 3.59 2.67 7.62 7.52 14.67 1.82 10.91 1.26 0.59 0.00 23 Ix_SR1 SilentIntronRegion 0 6.10 3.52 10.52 2.93 3.85 2.11 3.43 4.45 0.53 5.90 1.11 0.00 0.00 3.63 2.70 7.71 7.61 14.83 1.84 11.03 1.27 0.60 0.00 24 Ix Intron 0 8.84 1.42 9.54 5.66 1.86 0.96 3.69 6.28 8.33 9.22 2.02 1.86 0.82 12.60 9.18 6.21 4.02 11.99 4.44 4.81 0.38 0.00 6.13 25 Ix_SR1 SilentIntronRegion 0 8.90 1.43 9.60 5.70 1.88 0.96 3.71 6.32 8.39 9.29 2.03 1.87 0.82 12.69 9.24 6.25 4.05 12.07 4.47 4.85 0.39 0.00 6.17 26 Ix Intron 0 9.55 3.57 14.87 15.02 3.02 1.61 4.15 7.75 5.77 12.21 1.94 0.00 0.00 11.95 9.92 2.61 9.10 21.18 2.00 6.67 1.93 0.52 6.62 27 Ix_SR1 SilentIntronRegion 0 10.15 2.59 18.51 16.37 4.03 0.64 3.97 7.82 6.55 12.57 3.86 0.00 0.00 11.81 10.44 1.63 7.83 23.79 0.89 6.91 0.84 0.52 7.64 28 Ix_AR1 ActiveIntronRegion 0 9.03 4.59 11.33 13.78 2.02 2.61 4.37 7.75 5.03 11.96 0.01 0.00 0.00 12.21 9.50 3.62 10.48 18.73 3.14 6.48 3.05 0.53 5.64 29 Ix Intron 0 13.75 4.00 18.70 12.00 5.80 3.61 4.95 9.13 10.51 12.79 2.28 1.40 0.76 8.41 11.16 11.70 7.15 25.50 8.15 14.24 1.74 0.82 9.25 30 Ix_SR1 SilentIntronRegion 0 13.86 4.04 18.85 12.09 5.84 3.64 4.99 9.20 10.59 12.88 2.30 1.42 0.77 8.47 11.24 11.80 7.18 25.70 8.22 14.36 1.75 0.83 9.32 31 Ix Intron 0 11.43 4.60 22.65 15.41 7.42 2.54 6.96 20.11 10.07 20.33 4.93 1.67 1.41 18.41 18.15 11.49 11.32 22.71 10.23 17.08 5.47 0.91 9.21 32 Ix_SR1 SilentIntronRegion 0 11.46 4.61 22.72 15.45 7.44 2.55 6.98 20.17 10.10 20.38 4.95 1.68 1.41 18.46 18.21 11.53 11.35 22.77 10.26 17.12 5.48 0.91 9.24 33 Ix Intron 0 11.20 9.46 31.34 16.61 6.01 4.41 7.86 22.72 12.69 31.52 9.30 1.06 2.61 13.31 12.59 20.02 13.76 48.61 16.86 25.25 4.24 1.34 7.06 34 Ix_SR1 SilentIntronRegion 0 11.27 9.52 31.53 16.71 6.05 4.44 7.91 22.86 12.77 31.72 9.36 1.07 2.63 13.39 12.67 20.15 13.85 48.91 16.97 25.40 4.27 1.35 7.11 35 Ix_AR2 ActiveIntronRegion 0 10.05 5.53 8.51 5.09 1.82 3.74 2.70 5.95 8.65 5.84 3.94 4.85 0.00 13.77 17.25 2.02 6.73 6.09 6.50 8.68 0.00 4.25 7.95 36 Ix_AR1 ActiveIntronRegion 0 7.32 12.40 17.51 11.94 14.25 6.70 14.58 18.69 8.73 13.39 0.96 5.43 2.32 12.59 8.73 13.10 8.80 14.73 8.85 11.80 3.38 0.35 8.01 37 Ix Intron 0 5.30 1.50 6.73 9.58 5.92 1.62 3.71 14.82 8.14 12.09 2.85 1.05 2.28 16.22 9.33 11.39 3.89 39.92 18.77 6.59 1.30 1.23 15.58 38 Ix_AR2 ActiveIntronRegion 0 7.89 3.51 6.62 7.95 6.92 3.57 4.79 14.69 7.57 9.10 1.30 1.42 4.62 24.59 14.28 14.70 5.85 41.91 21.35 7.48 1.72 1.66 20.81 39 Ix_SR1 SilentIntronRegion 0 3.21 0.78 12.41 14.16 5.56 0.12 4.75 18.29 11.53 21.40 5.43 0.34 0.26 10.69 4.79 8.68 4.52 48.15 13.82 8.01 1.31 0.42 7.33 40 Ix_AR1 ActiveIntronRegion 0 4.25 0.00 2.97 8.17 5.23 0.74 1.95 12.73 6.47 8.77 2.65 1.19 1.37 11.92 7.68 10.13 1.53 32.76 19.94 4.79 0.88 1.38 16.35 41 Ix_AR1 ActiveIntronRegion 0 3.57 3.97 9.30 7.07 4.66 1.60 2.45 8.33 2.36 12.91 4.22 7.37 0.84 12.50 7.40 6.14 11.20 31.02 10.74 15.65 2.16 0.45 6.72 42 E2_Aa NovelBoundary 0 12.30 0.00 2.54 3.13 14.09 4.88 3.75 29.61 5.50 26.51 2.11 0.00 0.00 2.06 0.00 7.26 7.67 31.30 7.34 10.04 3.15 0.00 0.00 43 ER2a ExonRegion 0 0.00 0.00 0.06 0.01 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.04 0.00 0.00 0.00 0.10 0.08 0.02 0.00 0.00 0.00