Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC092111.1 Gene 0 5.72 31.96 22.60 51.05 24.26 7.76 14.22 39.30 99.82 41.27 0.27 0.66 0.72 2.45 0.57 0.74 1.06 49.19 30.13 47.29 23.66 7.71 8.15 2 456135 Transcript 0 2.42 13.25 8.48 15.04 9.28 2.60 4.30 12.69 29.52 15.53 0.06 0.53 0.14 1.58 0.12 0.15 0.79 17.46 10.31 17.51 9.31 3.94 3.76 3 ER1a ExonRegion 0 1.95 5.75 9.30 8.61 4.32 1.88 2.95 14.51 20.85 21.72 0.72 0.00 0.00 4.16 1.50 1.94 1.78 27.19 10.95 18.29 15.66 3.37 2.23 4 E1a_E2a KnownJunction 0 7.41 28.42 20.67 26.00 7.98 0.00 3.67 17.29 22.22 44.11 0.00 0.00 0.00 2.47 0.00 0.00 0.00 33.04 9.22 43.66 11.98 12.31 3.24 5 I1_AR2 ActiveIntronRegion 0 1.60 3.10 3.46 6.31 5.61 0.22 3.97 11.19 15.43 7.73 0.51 0.00 0.94 0.65 0.76 0.67 0.87 3.13 13.02 7.16 0.58 1.74 3.09 6 ER2a ExonRegion 0 1.92 9.56 14.17 13.95 5.27 0.86 2.50 18.07 21.96 23.74 0.00 0.00 0.00 1.50 0.00 0.00 0.57 34.67 3.24 20.35 3.82 2.83 4.54 7 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 4.24 4.66 0.00 0.00 2.89 1.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 I2_SR1 SilentIntronRegion 0 1.52 4.77 4.89 9.42 4.08 0.02 4.55 14.03 10.69 6.82 0.70 0.00 0.00 1.50 0.52 0.00 1.25 13.93 5.04 16.21 7.31 0.53 0.53 9 I2_AR1 ActiveIntronRegion 0 2.14 5.19 2.72 7.30 5.58 1.13 6.53 6.10 5.75 5.64 1.00 1.43 0.00 2.67 0.00 1.59 2.17 10.83 12.68 14.35 14.09 2.67 2.75 10 I2_SR2 SilentIntronRegion 0 2.12 0.74 1.00 2.48 0.00 1.83 6.38 6.91 12.58 4.27 1.05 0.00 0.00 1.62 0.00 0.00 0.00 14.11 19.11 20.89 8.01 1.89 0.00 11 I2_AR2 ActiveIntronRegion 0 1.19 2.85 0.00 3.65 0.00 0.51 5.83 5.32 13.93 6.01 0.00 0.00 0.00 0.19 0.00 0.00 0.00 16.70 4.33 15.40 4.41 2.08 0.00 12 I2_AR3 ActiveIntronRegion 0 2.12 6.54 0.79 4.09 0.00 0.00 5.77 3.46 14.73 6.88 0.00 0.00 0.00 0.81 0.00 0.00 0.00 17.16 6.37 21.12 4.41 2.08 0.00 13 I2_AR5 ActiveIntronRegion 0 10.58 7.80 2.45 5.45 7.14 0.00 5.08 10.37 9.88 3.44 1.93 0.00 0.00 3.25 0.00 0.00 1.65 9.24 9.56 7.80 4.41 2.08 0.00 14 I2_AR7 ActiveIntronRegion 0 3.58 18.82 10.53 7.05 10.36 0.80 6.65 20.96 10.98 8.09 0.63 0.00 0.00 3.07 0.00 1.29 2.15 16.08 17.23 17.44 7.16 2.71 1.27 15 E3_Aa NovelBoundary 0 10.30 38.41 19.07 18.95 45.50 0.00 37.19 39.64 56.16 36.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26.49 31.91 53.31 14.89 6.25 0.00 16 ER3a ExonRegion 0 5.09 40.97 13.12 16.46 26.37 6.27 7.03 22.64 49.58 21.51 0.00 5.87 0.00 6.23 0.00 0.00 2.72 21.49 25.95 25.91 23.78 2.35 6.77 17 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 I3_SR1 SilentIntronRegion 0 3.22 7.07 4.49 3.44 3.74 0.00 7.40 7.20 16.10 8.03 0.45 0.00 0.00 1.62 0.00 0.69 3.48 15.63 13.35 18.60 8.19 3.17 2.01 19 ER4a ExonRegion 0 1.71 12.11 7.53 6.85 8.34 0.35 6.06 8.13 18.94 7.94 0.00 0.00 0.00 1.00 0.00 0.00 0.00 13.02 11.99 3.50 6.84 2.54 2.46 20 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 I4 Intron 0 2.68 7.02 3.99 5.38 4.93 0.00 3.35 7.41 8.68 1.97 0.22 0.82 0.89 1.53 0.00 0.00 1.14 16.92 5.13 12.24 12.42 3.36 1.01 22 I4_AR1 ActiveIntronRegion 0 0.00 3.81 1.15 6.81 0.00 0.00 0.00 6.81 6.56 0.00 0.00 0.00 0.00 1.62 0.00 0.00 3.30 15.24 3.58 4.39 13.91 0.00 2.39 23 I4_AR2 ActiveIntronRegion 0 3.36 8.21 4.95 5.75 6.19 0.00 4.21 8.69 10.10 2.47 0.28 1.03 1.12 1.63 0.00 0.00 1.23 19.24 6.11 14.10 14.07 4.21 0.85 24 E5_Aa NovelBoundary 0 7.11 13.09 10.64 9.52 21.39 0.00 12.59 2.26 13.80 4.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.68 0.00 41.42 17.42 13.78 0.00 25 ER5a ExonRegion 0 0.00 0.57 0.72 3.09 1.34 0.00 0.23 0.41 6.87 0.61 0.00 0.00 0.00 0.12 0.00 0.00 0.00 6.74 0.47 5.60 4.47 2.42 2.42 26 E5a_E6a KnownJunction 0 0.00 0.00 0.00 1.90 8.66 0.00 0.00 1.77 8.54 1.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.26 6.05 2.69 8.62 27 E5a_E7a NovelJunction 0 0.00 9.08 14.61 8.69 7.72 2.56 0.00 6.00 41.84 4.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.70 4.71 20.13 21.19 0.00 4.35 28 E6_Aa NovelBoundary 0 20.37 31.97 4.55 26.74 6.45 0.00 21.33 15.77 19.99 7.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22.38 13.93 33.11 5.93 0.00 0.00 29 ER6a ExonRegion 0 1.79 6.70 0.11 1.38 1.11 2.96 2.08 1.62 7.28 1.04 0.00 0.00 0.00 1.57 0.00 0.00 5.18 0.40 12.01 8.28 5.42 4.84 2.08 30 E6_Da NovelBoundary 0 3.48 8.35 6.86 8.52 0.00 0.00 13.16 11.58 17.07 12.89 0.00 6.15 0.00 2.47 0.00 0.00 0.00 15.05 18.54 23.59 11.37 2.76 0.00 31 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.79 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 2.94 2.78 3.12 0.00 32 I6 Intron 0 5.21 23.03 11.99 15.80 19.90 1.82 13.68 22.38 22.60 16.10 0.08 0.31 0.34 0.94 0.19 0.39 0.86 16.40 15.01 28.14 10.57 2.34 4.19 33 I6_AR1 ActiveIntronRegion 0 7.12 26.27 17.38 18.07 24.17 2.83 17.00 26.81 27.32 22.04 0.15 0.54 0.59 1.34 0.34 0.57 1.00 23.64 22.36 38.50 15.31 2.88 6.80 34 I6_SR2 SilentIntronRegion 0 2.23 10.90 10.40 7.39 14.21 0.73 10.98 13.31 11.75 10.75 0.00 0.00 0.00 1.66 0.00 0.53 1.32 10.78 13.51 19.35 5.96 2.30 1.15 35 I6_SR3 SilentIntronRegion 0 3.34 30.28 4.12 22.46 22.35 0.41 12.25 27.31 25.33 8.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.33 2.16 14.40 2.49 1.88 0.66 36 Ix Intron 0 4.11 19.82 12.07 17.95 12.69 0.79 10.00 14.71 14.28 9.54 0.07 1.54 0.19 0.72 0.07 0.14 0.36 6.69 6.64 17.76 3.72 1.30 1.76 37 Ix_AR1 ActiveIntronRegion 0 7.60 28.11 24.13 21.80 27.97 1.86 18.91 36.97 22.88 16.61 0.27 1.80 0.39 1.70 0.00 0.27 0.46 11.97 13.49 24.79 5.68 4.31 2.84 38 Ix_SR1 SilentIntronRegion 0 3.01 17.59 8.04 17.20 7.62 0.43 7.19 7.15 11.62 7.32 0.00 1.52 0.13 0.39 0.10 0.10 0.34 5.01 4.40 15.96 3.13 0.25 1.44 39 I6 Intron 0 5.09 29.01 14.23 55.25 16.27 1.05 14.37 28.70 43.09 25.82 0.12 0.28 0.41 0.07 0.04 0.11 0.07 10.70 9.88 23.11 5.45 2.40 3.41 40 I6_AR1 ActiveIntronRegion 0 2.25 4.32 6.93 10.79 4.87 0.00 1.61 15.24 25.14 7.26 0.00 0.00 0.00 0.41 0.00 0.00 0.00 4.05 2.42 20.34 1.67 2.53 2.23 41 I6_AR2 ActiveIntronRegion 0 5.18 24.72 12.58 52.60 9.79 0.50 16.71 31.55 44.40 28.77 0.00 0.67 0.47 0.24 0.00 0.00 0.00 9.68 10.94 22.65 9.85 3.20 5.12 42 I6_SR2 SilentIntronRegion 0 3.23 42.37 13.84 79.91 24.15 0.22 21.87 38.68 50.56 31.66 0.46 0.00 1.85 0.00 0.00 0.00 0.00 10.24 13.26 26.93 6.21 1.42 1.52 43 I6_AR3 ActiveIntronRegion 0 3.91 20.28 8.59 49.70 16.03 1.13 19.13 18.59 31.32 17.43 0.00 0.00 0.22 0.00 0.00 0.17 0.18 9.27 8.74 27.29 4.94 2.33 3.45 44 I6_SR3 SilentIntronRegion 0 7.23 39.97 15.09 67.11 16.55 1.42 16.92 29.25 50.05 28.09 0.16 0.29 1.10 0.00 0.00 0.48 0.13 9.13 9.85 31.78 5.28 3.31 5.26 45 I6_AR4 ActiveIntronRegion 0 3.14 29.32 23.62 78.17 15.04 0.00 9.54 27.31 57.57 27.37 0.00 0.00 0.00 0.00 0.00 0.00 0.35 12.86 7.43 25.72 7.24 3.53 3.74 46 I6_SR4 SilentIntronRegion 0 7.64 36.13 23.06 69.58 22.42 1.91 14.15 41.17 55.31 37.22 0.22 0.21 0.00 0.08 0.06 0.00 0.00 17.81 15.55 21.39 6.28 2.11 3.56 47 I6_AR5 ActiveIntronRegion 0 1.18 0.68 0.95 5.30 0.00 0.00 0.00 15.17 11.66 4.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.82 0.00 0.00 4.16 0.00 0.00 48 E7_Aa NovelBoundary 0 7.41 30.98 14.52 57.64 48.05 0.00 34.27 40.79 80.93 47.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.49 20.05 25.25 2.59 5.27 0.00 49 ER7a ExonRegion 0 11.53 68.16 44.64 117.34 53.00 16.83 31.41 80.54 222.90 78.10 0.00 1.04 1.83 1.05 0.00 0.00 0.00 90.49 60.23 95.84 40.19 14.68 16.55 50 IG25 Intergenic 0 2.71 34.70 9.39 38.84 11.30 1.02 5.34 22.76 37.50 22.90 0.00 0.00 0.00 0.11 0.00 0.08 0.00 7.00 7.26 11.12 8.08 0.87 1.71 51 IG25_AR1 ActiveIntergenicRegion 0 1.26 51.79 6.83 31.80 6.99 0.41 4.15 23.94 36.66 25.90 0.00 0.00 0.00 0.36 0.00 0.00 0.00 6.78 8.22 15.93 11.28 1.06 0.78 52 IG25_SR1 SilentIntergenicRegion 0 6.35 97.61 16.30 76.33 17.54 3.47 18.23 46.25 74.14 59.16 0.00 0.00 0.00 0.20 0.00 0.00 0.00 11.96 16.41 31.76 17.14 2.01 3.02 53 IG25_AR2 ActiveIntergenicRegion 0 2.86 31.83 10.14 41.48 12.30 0.97 5.29 22.74 39.88 22.78 0.00 0.00 0.00 0.09 0.00 0.12 0.00 7.21 7.53 9.64 8.05 0.93 2.00 54 IG25_SR2 SilentIntergenicRegion 0 2.00 13.92 6.47 21.81 6.95 0.43 1.56 16.42 16.51 8.88 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.42 2.26 8.04 3.11 0.00 0.69