Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 APOLD1 Gene 0 37.28 26.06 58.78 60.45 139.21 23.69 49.96 52.32 239.04 55.50 6.68 15.84 15.10 16.07 9.58 18.05 19.35 53.77 10.10 18.07 18.00 16.04 8.50 2 326765 Transcript 0 6.83 3.75 4.48 4.06 12.32 6.20 10.78 5.53 1.71 11.29 4.52 1.64 0.59 8.35 7.55 15.52 8.62 18.87 4.40 14.61 10.27 0.96 1.80 3 356591 Transcript 0 16.97 2.71 14.92 13.32 32.14 4.22 8.58 14.78 54.91 9.37 0.33 3.59 3.06 1.92 1.67 1.22 8.16 6.11 1.23 3.99 0.81 3.39 0.57 4 IG10_SR1 SilentIntergenicRegion 0 21.32 11.79 11.17 6.24 6.16 7.86 8.28 15.45 10.61 5.05 8.13 15.48 6.12 8.20 12.97 0.00 6.97 4.20 3.90 10.71 0.76 1.02 0.70 5 IG10_AR2 ActiveIntergenicRegion 0 5.14 11.91 15.58 7.40 6.88 4.98 18.16 13.83 15.53 6.88 8.56 18.55 14.07 3.02 16.16 0.00 6.60 3.70 0.00 10.64 2.20 2.08 2.94 6 IG10_SR2 SilentIntergenicRegion 0 4.76 6.78 22.38 17.12 10.29 0.76 8.41 15.32 9.12 7.68 6.72 22.36 6.51 5.98 10.35 3.92 6.03 5.42 1.70 9.89 0.02 1.15 0.68 7 IG10_AR3 ActiveIntergenicRegion 0 11.29 4.07 16.13 11.81 9.81 1.83 9.27 12.10 7.41 4.59 8.05 12.99 0.00 1.62 8.70 0.00 3.30 3.70 3.19 14.54 0.00 2.08 2.94 8 IG10_AR4 ActiveIntergenicRegion 0 12.83 1.60 2.15 1.59 4.16 6.46 1.56 1.69 1.44 0.67 0.76 1.33 1.52 0.97 1.92 2.33 1.29 2.52 0.34 4.17 2.59 0.00 0.00 9 ER1a ExonRegion 0 13.66 7.50 8.97 8.11 24.65 12.39 21.56 8.60 3.42 19.55 4.52 3.29 1.19 16.70 15.10 31.05 17.24 18.80 8.81 26.29 12.13 1.92 3.61 10 E1_Da NovelBoundary 0 14.37 9.34 12.57 16.75 33.62 8.06 8.57 10.93 7.55 30.70 13.53 6.30 25.00 10.07 8.90 8.72 22.07 49.12 20.52 31.64 0.00 3.12 0.00 11 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.46 0.00 3.04 4.53 0.00 0.00 0.00 0.00 0.00 0.00 18.94 0.00 2.94 8.40 0.00 0.00 12 I1 Intron 0 15.98 22.12 3.55 18.49 38.21 9.94 34.61 9.83 4.94 13.43 4.25 19.38 19.82 6.98 10.26 25.36 16.18 39.68 8.72 27.53 9.49 2.01 3.36 13 I1_AR1 ActiveIntronRegion 0 0.00 3.58 0.00 0.00 4.71 1.61 2.33 0.00 0.00 0.00 1.70 0.00 3.40 9.41 14.36 20.91 14.46 4.87 2.80 22.41 0.00 0.00 5.16 14 I1_AR2 ActiveIntronRegion 0 55.03 66.02 13.89 37.29 68.47 13.68 46.30 24.64 10.03 29.25 13.28 68.11 67.96 19.28 23.05 30.74 22.15 27.94 13.42 38.70 4.53 5.71 5.63 15 I1_AR3 ActiveIntronRegion 1 205.07 210.81 32.54 118.12 236.95 18.54 162.99 67.79 26.49 73.02 43.17 157.78 124.55 50.17 61.57 90.81 34.84 114.36 57.34 95.27 6.61 15.05 9.79 16 I1_AR4 ActiveIntronRegion 1 203.19 194.93 29.93 117.01 233.17 20.17 159.82 64.45 26.82 72.91 36.45 154.01 111.22 43.39 60.10 89.59 29.24 115.88 52.79 92.40 7.87 15.78 8.81 17 I1_SR1 SilentIntronRegion 0 20.28 27.48 5.53 25.42 48.44 12.85 40.15 14.18 6.94 21.81 5.14 25.04 25.73 8.09 11.09 28.34 17.09 46.32 10.65 32.35 10.22 2.41 4.57 18 I1_AR5 ActiveIntronRegion 0 5.51 15.50 1.14 13.11 33.54 6.50 31.62 9.16 5.02 6.68 4.92 8.96 11.94 5.22 9.44 22.24 20.50 31.10 12.49 25.45 9.91 0.74 2.98 19 I1_SR2 SilentIntronRegion 0 10.01 14.81 2.06 14.20 28.23 7.62 29.26 5.49 2.70 7.28 3.13 11.94 11.94 5.93 8.91 23.64 15.86 38.62 8.49 25.41 10.61 1.25 3.06 20 I1_AR6 ActiveIntronRegion 0 8.11 19.73 1.21 14.11 36.26 8.81 48.56 6.41 5.69 8.88 2.33 22.51 12.34 6.55 6.61 24.03 15.54 42.31 6.95 27.90 11.13 0.00 2.05 21 I1_AR7 ActiveIntronRegion 0 12.70 17.03 1.23 15.84 54.52 16.50 39.39 4.32 4.94 7.88 0.00 10.28 28.14 11.77 8.70 29.72 16.50 60.05 6.37 18.09 9.37 2.08 2.94 22 I1_AR8 ActiveIntronRegion 0 12.70 16.27 0.98 17.31 52.98 16.14 29.13 5.01 5.68 9.18 1.35 23.38 31.89 9.58 8.70 27.34 15.18 62.82 6.37 26.60 9.48 3.75 2.94 23 I1_SR3 SilentIntronRegion 0 13.61 18.01 1.23 17.33 45.49 17.03 28.18 5.19 4.94 9.67 1.93 23.50 37.52 7.89 8.70 30.15 22.63 62.03 9.56 33.74 8.19 4.17 2.94 24 I1_AR9 ActiveIntronRegion 0 15.01 18.86 1.23 16.11 39.89 15.00 26.72 4.71 6.62 10.32 1.93 25.98 31.98 7.09 5.01 27.56 22.21 59.13 8.69 37.52 6.61 4.17 0.53 25 I1_AR10 ActiveIntronRegion 0 15.19 21.39 1.82 12.46 50.12 16.41 37.99 5.90 6.95 9.15 6.52 23.12 6.78 2.81 10.05 27.17 21.93 37.22 7.22 43.12 5.82 1.49 0.00 26 I1_AR11 ActiveIntronRegion 0 14.46 6.44 1.23 1.93 22.97 19.56 33.21 5.19 3.40 3.25 9.99 17.32 3.52 2.84 12.81 16.84 6.60 8.31 1.59 29.26 4.41 2.08 0.00 27 I1_AR14 ActiveIntronRegion 0 10.58 6.69 1.03 2.30 6.34 0.00 11.88 4.46 0.62 0.33 2.29 4.22 2.35 4.57 6.03 8.45 2.52 5.40 3.44 6.61 3.54 0.00 2.63 28 I1_SR4 SilentIntronRegion 0 15.33 26.16 2.44 14.54 35.37 9.29 34.28 7.29 3.86 7.96 3.81 13.22 12.66 5.16 10.32 24.03 15.50 38.78 5.74 27.54 8.24 1.97 3.01 29 I1_AR15 ActiveIntronRegion 0 20.93 23.13 1.70 19.83 49.94 12.06 42.58 9.44 6.24 5.78 1.93 19.33 18.88 7.82 13.29 16.89 12.15 31.64 5.09 22.81 4.76 3.12 0.59 30 I1_SR5 SilentIntronRegion 0 10.79 12.57 1.54 11.25 27.23 7.36 27.83 6.75 3.61 8.78 2.98 16.23 18.34 5.61 8.09 23.49 14.23 33.28 6.31 19.51 9.01 1.83 1.78 31 I1 Intron 0 7.67 12.20 1.60 8.06 20.99 6.06 18.17 7.17 3.22 9.37 2.52 12.39 10.96 4.70 4.60 14.59 11.19 31.80 5.40 14.52 6.88 0.80 0.92 32 I1_SR1 SilentIntronRegion 0 12.31 14.22 2.86 10.74 34.94 10.88 24.65 8.69 3.37 10.18 2.86 13.62 14.87 4.58 6.44 14.25 10.86 23.34 6.52 15.24 4.98 0.58 0.85 33 I1_AR1 ActiveIntronRegion 0 9.49 13.96 5.76 14.12 25.65 9.52 15.89 13.96 8.45 9.74 2.87 28.56 21.66 8.34 9.45 11.75 21.62 35.71 13.03 19.39 4.23 1.57 0.00 34 I1_AR2 ActiveIntronRegion 0 13.27 14.14 1.93 10.48 28.68 8.78 22.97 7.27 4.35 15.11 4.88 17.47 14.95 6.58 4.26 22.64 14.80 46.04 12.12 20.77 10.62 0.72 0.59 35 I1_SR2 SilentIntronRegion 0 4.83 10.99 0.83 6.37 13.07 3.27 14.53 6.22 2.95 8.58 2.18 11.07 8.42 4.56 3.55 14.33 10.90 35.27 4.21 13.64 7.70 0.91 1.00 36 E2_Aa NovelBoundary 0 3.63 3.35 0.00 10.06 16.47 0.00 10.60 2.01 4.60 7.44 0.00 6.00 13.64 5.24 0.00 23.93 25.90 65.37 4.05 12.78 16.49 0.00 7.34 37 ER2a ExonRegion 0 2.98 4.90 0.25 2.35 4.44 0.58 6.41 2.36 9.22 0.70 0.00 2.07 2.13 0.66 0.00 1.72 17.22 12.18 3.69 3.70 2.43 0.59 1.70 38 E2_Da NovelBoundary 0 75.20 12.23 5.56 11.25 25.13 7.04 37.98 4.07 46.09 6.21 2.47 0.00 0.00 7.06 0.00 27.94 17.77 46.55 0.00 15.21 8.59 2.51 3.33 39 E2a_E3a KnownJunction 0 22.89 0.00 1.45 1.50 24.87 5.11 1.85 7.35 94.41 6.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.33 0.00 40 I2 Intron 0 8.86 6.04 4.11 6.77 16.02 4.21 20.44 9.39 26.10 9.77 2.35 15.48 10.20 4.43 2.58 12.84 14.26 24.64 6.02 13.03 6.05 0.47 3.30 41 I2_SR1 SilentIntronRegion 0 10.07 6.49 4.33 7.63 19.44 4.41 24.89 10.47 31.18 11.92 2.23 18.96 12.27 4.56 2.52 13.93 15.91 26.27 5.93 15.43 4.19 0.57 2.90 42 I2_AR1 ActiveIntronRegion 0 6.57 5.20 3.71 5.13 9.53 3.84 11.99 7.36 16.46 5.69 2.59 8.85 6.25 4.22 2.71 10.82 11.18 21.64 6.23 8.48 9.65 0.27 4.11 43 E3_Aa NovelBoundary 0 3.04 0.00 0.00 0.00 7.81 0.00 0.00 1.89 4.43 2.66 0.00 0.00 0.00 12.24 0.00 7.69 4.49 32.79 0.00 0.00 3.03 0.00 0.00 44 ER3a ExonRegion 0 39.07 27.60 62.08 63.99 147.46 24.88 52.48 55.26 255.65 58.56 7.00 16.71 16.02 16.55 9.65 18.19 19.70 56.78 10.46 18.23 18.86 17.09 8.97 45 E3_Da KnownBoundary 0 55.42 8.22 56.74 39.09 27.59 8.35 23.85 49.74 87.38 29.71 2.05 0.00 0.00 12.01 4.45 0.00 14.21 11.73 0.00 5.82 0.00 3.12 0.00 46 ER3b ExonRegion 0 25.05 3.24 43.06 36.10 67.12 6.96 17.48 34.63 61.11 21.03 0.99 8.71 7.04 5.09 5.01 1.95 7.27 6.14 0.00 8.28 0.00 4.24 0.00 47 IG11_AR1 ActiveIntergenicRegion 0 1.04 1.00 0.90 1.00 7.87 7.19 3.25 3.79 5.42 4.19 0.95 0.00 3.52 1.22 2.01 10.20 4.86 27.96 4.69 0.00 5.40 1.02 4.32 48 IG11_SR3 SilentIntergenicRegion 0 2.45 0.59 0.53 1.84 19.89 12.59 10.39 7.19 9.57 10.68 1.32 3.89 0.00 3.53 0.59 6.52 4.13 22.92 4.62 0.39 9.95 0.99 0.85 49 IG11_AR3 ActiveIntergenicRegion 0 1.56 0.00 1.35 0.66 17.14 4.28 3.88 2.25 4.13 9.10 1.89 5.49 1.43 4.51 2.27 5.97 3.28 23.36 3.53 0.29 7.65 0.27 1.09