Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 FAM90A1 Gene 0 1.44 3.36 7.08 10.00 4.00 0.14 3.23 10.12 13.02 9.18 0.00 0.28 2.47 4.56 1.72 0.00 3.63 2.16 4.17 3.34 5.14 1.20 0.92 2 307435 Transcript 0 1.49 2.17 7.85 7.39 3.55 0.14 1.77 4.75 6.39 3.67 0.00 0.27 6.07 4.81 2.75 0.00 2.52 1.27 1.56 2.15 2.79 1.25 1.11 3 ER1a ExonRegion 0 0.86 0.84 4.68 4.13 0.02 0.00 0.97 0.04 1.51 2.21 0.00 0.00 3.20 1.97 0.78 0.00 1.37 0.02 0.00 1.80 0.91 0.19 0.00 4 E1a_E2a KnownJunction 0 3.63 0.00 7.84 12.25 0.00 0.00 0.00 0.00 3.59 0.00 0.00 0.00 0.00 4.59 10.38 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 5 E2_Aa NovelBoundary 0 3.70 0.00 1.74 3.60 12.14 0.00 2.25 9.90 17.82 10.88 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.35 4.80 0.00 3.15 0.00 4.35 6 ER2a ExonRegion 0 2.71 4.95 10.60 11.84 5.16 0.94 2.86 10.12 16.67 9.00 0.00 0.00 6.80 7.21 3.39 0.00 2.53 4.98 1.62 5.79 4.78 3.10 1.92 7 E2_Da NovelBoundary 0 0.00 0.00 0.00 20.11 4.33 0.00 11.00 16.39 24.25 8.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.31 9.60 3.07 0.00 0.00 0.00 8 E2a_E3a KnownJunction 0 0.00 2.96 12.48 6.69 11.54 0.00 1.90 6.24 4.11 1.34 0.00 0.00 26.13 9.83 0.00 0.00 0.00 0.00 0.00 2.88 5.44 0.00 4.35 9 E3_Aa NovelBoundary 0 0.00 8.68 4.17 21.84 20.20 0.00 6.18 12.90 16.67 12.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.18 0.00 0.00 2.47 2.69 0.00 10 ER3a ExonRegion 0 1.98 3.06 12.94 6.35 3.93 0.00 3.21 5.60 4.78 2.96 0.00 1.67 4.69 5.72 3.22 0.00 10.24 1.93 4.47 1.29 2.73 1.89 0.59 11 E3_Da NovelBoundary 0 3.48 3.29 5.47 14.75 0.00 0.00 3.71 7.43 20.72 14.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.80 12.14 11.61 0.00 0.00 12 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 I3 Intron 0 0.98 1.41 0.42 11.39 2.88 0.28 2.44 9.89 19.65 8.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.89 4.40 4.90 4.57 0.80 0.90 14 I3_SR1 SilentIntronRegion 0 0.98 1.41 0.42 11.42 2.89 0.28 2.45 9.92 19.71 8.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.90 4.42 4.92 4.58 0.81 0.90 15 ER4a ExonRegion 0 1.28 3.37 6.39 10.50 4.17 0.06 3.46 11.26 14.06 10.22 0.00 0.24 1.68 4.34 1.47 0.00 3.49 1.98 4.82 3.29 5.70 0.98 0.89 16 IG25 Intergenic 0 2.71 34.70 9.39 38.84 11.30 1.02 5.34 22.76 37.50 22.90 0.00 0.00 0.00 0.11 0.00 0.08 0.00 7.00 7.26 11.12 8.08 0.87 1.71 17 IG25_SR2 SilentIntergenicRegion 0 2.00 13.92 6.47 21.81 6.95 0.43 1.56 16.42 16.51 8.88 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.42 2.26 8.04 3.11 0.00 0.69 18 IG25_AR2 ActiveIntergenicRegion 0 2.86 31.83 10.14 41.48 12.30 0.97 5.29 22.74 39.88 22.78 0.00 0.00 0.00 0.09 0.00 0.12 0.00 7.21 7.53 9.64 8.05 0.93 2.00 19 IG25_SR1 SilentIntergenicRegion 0 6.35 97.61 16.30 76.33 17.54 3.47 18.23 46.25 74.14 59.16 0.00 0.00 0.00 0.20 0.00 0.00 0.00 11.96 16.41 31.76 17.14 2.01 3.02 20 IG25_AR1 ActiveIntergenicRegion 0 1.26 51.79 6.83 31.80 6.99 0.41 4.15 23.94 36.66 25.90 0.00 0.00 0.00 0.36 0.00 0.00 0.00 6.78 8.22 15.93 11.28 1.06 0.78