Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 FBXL14 Gene 0 10.33 10.51 13.10 10.25 5.75 9.84 10.14 5.41 9.87 13.59 18.58 19.38 9.63 19.62 17.18 13.00 31.82 10.41 5.93 9.10 19.90 9.82 17.24 2 339235 Transcript 0 8.45 7.99 8.04 7.66 4.42 6.96 8.16 3.63 7.86 8.37 11.38 15.88 6.90 11.18 10.04 7.46 23.64 8.59 3.47 5.37 13.27 6.61 12.54 3 IG14 Intergenic 0 2.81 3.78 2.55 1.09 1.26 0.07 4.52 0.43 1.04 0.21 5.34 17.08 3.93 1.22 2.35 1.63 26.08 0.68 0.42 0.91 12.12 3.05 17.28 4 IG14_AR4 ActiveIntergenicRegion 0 1.91 1.84 0.74 0.52 1.97 0.24 3.69 0.67 0.00 0.00 5.51 5.84 0.00 0.17 2.33 2.98 29.00 1.51 0.00 1.10 23.57 2.42 14.47 5 IG14_SR4 SilentIntergenicRegion 0 2.41 3.69 2.00 1.37 1.93 0.00 5.53 0.09 0.59 0.00 4.19 22.07 4.46 1.04 1.75 1.93 27.84 0.24 0.00 1.06 15.85 3.41 19.11 6 IG14_SR3 SilentIntergenicRegion 0 1.73 2.78 1.56 0.82 1.44 0.00 4.77 0.46 0.41 0.15 4.60 18.99 5.06 0.45 1.91 0.80 22.11 0.70 0.14 0.95 11.46 3.93 16.23 7 IG14_AR2 ActiveIntergenicRegion 0 1.43 4.68 1.77 0.49 0.00 0.00 3.12 0.00 0.44 0.00 1.87 11.55 5.13 0.32 0.99 0.72 27.66 0.00 0.00 0.51 20.76 2.01 13.32 8 IG14_SR2 SilentIntergenicRegion 0 2.74 3.96 2.39 0.00 0.00 0.00 0.87 0.00 2.39 0.00 3.79 4.33 0.00 3.48 1.90 0.00 6.47 1.80 0.00 0.00 7.18 1.36 11.52 9 IG14_SR1 SilentIntergenicRegion 0 3.06 3.97 2.85 1.13 1.15 0.09 4.43 0.49 1.23 0.27 5.69 16.79 3.88 1.38 2.53 1.66 26.29 0.71 0.55 0.89 11.00 2.96 17.39 10 ER1a ExonRegion 0 2.26 5.47 16.71 6.02 2.74 7.74 6.76 5.28 6.00 17.12 23.80 4.09 7.16 29.47 24.48 19.23 19.28 14.36 8.42 12.67 19.89 9.46 11.82 11 E1_Da NovelBoundary 1 91.94 43.22 172.79 50.21 55.18 72.80 77.28 102.81 75.14 178.28 232.01 49.37 85.06 222.38 113.85 175.85 171.95 157.40 104.29 114.80 97.73 100.48 74.95 12 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 2.25 0.00 1.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.25 0.00 0.00 0.00 0.00 0.00 13 I1 Intron 0 10.60 13.74 7.14 5.72 5.62 1.79 11.80 3.19 4.25 2.30 10.76 26.74 6.61 3.40 5.73 3.49 42.64 2.05 1.26 3.05 18.39 5.56 24.49 14 I1_AR1 ActiveIntronRegion 0 26.36 27.85 16.13 19.02 32.28 10.32 47.62 14.50 14.04 14.62 26.38 54.29 34.27 16.90 18.30 7.68 45.51 3.30 6.84 15.55 14.72 19.24 31.67 15 I1_SR1 SilentIntronRegion 0 18.20 25.04 15.38 12.30 11.58 4.57 20.75 8.39 10.45 7.17 13.02 36.64 8.75 5.10 8.29 5.71 49.73 3.75 3.70 7.38 15.46 9.40 25.60 16 I1_AR2 ActiveIntronRegion 0 7.71 17.06 14.17 7.13 6.63 3.16 15.64 2.68 3.79 1.03 17.06 31.38 5.08 5.47 6.20 0.90 33.34 2.06 0.96 1.49 13.22 6.16 28.17 17 I1_SR2 SilentIntronRegion 0 9.71 12.86 5.52 4.62 3.96 0.99 9.45 2.06 3.05 1.11 10.57 26.92 6.38 2.79 5.35 3.14 41.70 1.80 0.60 1.93 19.77 4.89 24.73 18 I1_AR3 ActiveIntronRegion 0 3.81 2.89 3.52 1.84 2.44 0.51 6.17 0.71 3.80 1.41 8.23 5.71 1.06 2.86 3.72 1.64 41.38 0.76 0.00 2.71 22.05 0.96 23.00 19 I1_SR3 SilentIntronRegion 0 4.85 4.22 3.32 1.58 2.58 0.88 7.18 0.86 1.21 0.35 7.09 13.78 2.51 2.19 3.13 2.26 39.14 1.16 0.65 1.38 16.87 2.78 21.55 20 E2_Aa NovelBoundary 0 40.67 18.62 9.93 7.52 4.16 0.00 11.17 3.66 1.39 1.50 17.32 12.00 6.82 4.71 4.45 0.00 82.00 2.49 0.00 3.20 37.44 9.25 19.89 21 ER2a ExonRegion 1 23.08 18.49 7.40 16.95 10.51 13.15 15.47 5.62 15.99 8.00 10.34 43.56 13.54 4.06 5.65 3.15 51.64 4.16 1.99 3.45 19.91 10.38 25.82 22 IG13_SR9 SilentIntergenicRegion 0 10.06 7.77 1.69 9.64 6.55 8.54 7.71 1.32 8.56 3.58 5.79 23.52 5.80 1.16 3.85 2.29 47.66 1.88 1.68 4.03 13.80 6.39 18.18 23 IG13_AR9 ActiveIntergenicRegion 0 16.84 18.88 4.86 14.19 12.56 11.79 15.12 5.25 15.32 5.18 13.03 43.75 10.65 3.41 5.63 3.03 74.58 4.09 5.00 4.26 31.48 9.55 26.68 24 IG13_SR8 SilentIntergenicRegion 0 5.17 6.32 3.57 3.23 3.26 2.26 6.94 1.08 2.90 1.23 7.07 21.78 7.21 2.25 4.73 2.76 49.69 1.69 1.16 1.59 20.69 2.74 22.15 25 IG13_SR7 SilentIntergenicRegion 0 0.06 0.00 0.00 0.00 0.04 0.00 0.00 0.00 0.00 0.13 13.41 2.12 0.00 1.85 0.94 0.23 12.94 0.55 0.00 0.00 13.78 0.00 9.40 26 IG13_SR6 SilentIntergenicRegion 0 0.30 0.57 0.62 0.19 1.00 0.43 0.49 0.24 0.51 0.56 4.95 4.87 0.00 2.71 0.79 0.41 19.36 0.28 0.15 0.00 2.35 0.16 1.51 27 IG13_AR6 ActiveIntergenicRegion 0 0.00 0.70 1.25 0.00 0.91 0.84 1.82 0.29 0.63 0.98 6.98 6.47 2.21 2.51 1.78 1.02 20.32 0.00 0.36 0.73 2.52 1.19 0.67