Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PTPRO Gene 0 17.40 118.78 19.08 45.69 29.85 36.75 51.23 2.88 20.53 55.69 4.00 3.49 7.90 1.22 4.04 2.21 0.99 30.07 0.63 127.07 0.35 2.00 6.14 2 442921 Transcript 0 0.00 1.10 0.46 1.07 0.00 0.10 4.19 0.00 0.73 1.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.89 0.00 6.44 0.00 0.00 0.00 3 281171 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 348962 Transcript 0 10.82 3.35 0.00 1.40 3.31 2.33 6.76 0.00 1.27 2.95 2.21 0.00 0.00 2.88 0.00 0.00 4.77 0.00 0.00 0.00 0.00 0.00 0.00 5 445537 Transcript 0 16.45 44.08 7.90 15.12 14.18 12.55 17.41 2.52 5.85 10.91 5.51 3.45 7.03 1.37 1.92 3.80 0.41 8.37 0.02 36.23 0.62 0.42 1.13 6 ER1a ExonRegion 0 0.00 1.10 0.46 1.07 0.00 0.10 4.19 0.00 0.73 1.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.89 0.00 6.44 0.00 0.00 0.00 7 E1_Ab KnownBoundary 0 0.00 6.45 1.30 2.73 0.00 2.56 14.31 0.00 1.50 5.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.20 0.00 12.14 0.00 0.00 0.00 8 ER1b ExonRegion 0 0.00 15.51 4.44 6.45 0.55 9.95 10.95 0.00 3.88 9.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.44 0.00 49.19 0.00 1.65 2.96 9 E1a_E2a KnownJunction 0 0.00 3.35 1.71 9.69 0.00 8.18 7.91 0.00 5.41 30.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44.23 0.00 112.88 0.00 2.39 0.00 10 I1_AR1 ActiveIntronRegion 0 0.19 29.54 4.06 13.29 1.58 0.93 15.33 1.13 3.74 7.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.34 0.00 12.72 0.00 0.00 0.54 11 I1_SR2 SilentIntronRegion 0 0.34 31.87 5.21 11.40 6.56 0.00 10.45 1.13 2.25 8.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.20 0.00 9.47 0.00 0.00 0.00 12 I1_AR2 ActiveIntronRegion 0 1.85 32.22 4.21 8.00 9.06 0.00 7.33 0.35 2.31 9.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.71 0.00 12.93 0.00 0.00 0.00 13 ER2a ExonRegion 0 0.00 43.39 9.24 18.56 5.21 22.30 32.17 0.96 14.91 41.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29.04 1.19 139.63 0.00 3.28 4.04 14 E2a_E3a KnownJunction 0 0.00 69.33 11.03 27.20 4.33 47.93 21.82 0.00 24.97 33.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18.99 0.00 144.77 0.00 3.06 12.21 15 ER3a ExonRegion 0 0.00 83.90 13.16 24.41 8.55 29.51 50.63 0.83 32.36 49.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21.37 1.02 169.37 0.00 3.85 8.55 16 E3a_E4a KnownJunction 0 0.00 87.94 16.59 30.43 24.62 39.47 49.15 0.00 34.00 64.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.17 0.00 231.57 0.00 6.18 18.87 17 ER4a ExonRegion 0 0.00 102.77 15.93 32.82 15.77 40.04 55.77 0.86 30.44 67.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27.79 0.00 196.91 0.00 6.13 10.10 18 E4a_E5a KnownJunction 0 0.00 178.72 11.68 34.66 3.90 42.53 49.29 0.00 30.82 75.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26.49 0.00 199.61 0.00 5.08 15.96 19 ER5a ExonRegion 0 0.28 100.89 13.00 38.95 15.41 42.65 61.09 0.59 20.64 68.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32.60 0.73 174.27 0.00 3.25 11.53 20 E5a_E6a KnownJunction 0 2.82 93.60 10.50 26.17 7.64 32.37 81.04 0.00 20.17 68.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22.55 0.00 122.53 0.00 3.12 3.41 21 E6_Aa NovelBoundary 0 0.00 14.47 4.23 21.11 0.00 2.84 0.00 0.00 1.71 4.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27.87 0.00 0.00 4.18 22 ER6a ExonRegion 0 1.24 80.62 21.39 42.34 13.08 32.94 61.26 0.67 24.73 70.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 49.67 4.01 173.94 0.00 1.67 8.03 23 E6a_E7a KnownJunction 0 0.00 106.69 31.49 45.22 28.95 34.24 81.04 1.81 23.52 84.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 55.92 0.00 235.92 0.00 0.00 16.65 24 E7_Aa NovelBoundary 0 0.00 19.54 1.39 0.00 3.74 15.90 9.01 0.00 3.10 3.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.49 0.00 5.88 0.00 0.00 0.00 25 ER7a ExonRegion 0 0.00 95.75 23.54 39.30 8.08 33.19 50.87 0.78 17.65 69.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51.73 1.65 158.30 0.00 1.79 5.14 26 E7_Da NovelBoundary 0 0.00 31.18 13.90 22.57 0.00 0.00 12.32 0.00 0.00 8.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.42 0.00 8.95 0.00 0.00 0.00 27 E7a_E8a KnownJunction 0 0.00 86.23 14.13 27.70 12.99 18.00 66.82 0.00 15.86 78.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 56.79 0.00 175.77 0.00 11.51 3.93 28 I7 Intron 0 0.27 26.73 7.91 18.17 5.10 2.11 8.26 0.25 2.87 6.38 0.00 0.05 0.11 0.00 0.00 0.00 0.00 3.12 0.18 15.88 0.00 0.00 0.41 29 I7_SR1 SilentIntronRegion 0 0.27 26.75 7.92 18.19 5.11 2.11 8.27 0.25 2.87 6.38 0.00 0.05 0.11 0.00 0.00 0.00 0.00 3.12 0.18 15.89 0.00 0.00 0.41 30 ER8a ExonRegion 0 0.00 61.06 13.08 40.14 17.14 36.75 52.87 0.00 13.75 72.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 45.86 0.00 179.29 0.00 1.48 7.98 31 E8a_E9a KnownJunction 0 0.00 88.93 12.03 50.54 15.70 49.46 66.99 0.00 13.63 91.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37.64 0.00 211.69 0.00 0.00 7.68 32 ER9a ExonRegion 0 0.00 106.88 17.14 44.48 24.40 41.68 51.90 1.10 18.76 73.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39.63 0.84 177.97 0.00 3.29 6.18 33 E9_Da NovelBoundary 0 0.00 37.10 8.40 26.27 0.00 0.00 2.16 0.00 5.30 5.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.77 0.00 30.17 0.00 6.25 0.00 34 E9a_E10a KnownJunction 0 0.00 81.10 5.80 38.12 24.45 34.01 44.12 2.42 25.84 53.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51.86 0.00 157.94 0.00 0.00 4.18 35 I9_AR1 ActiveIntronRegion 0 0.00 25.91 3.33 5.51 3.66 0.00 10.15 0.00 0.78 3.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.94 0.00 10.66 0.00 0.00 0.00 36 ER10a ExonRegion 0 0.00 61.53 10.67 29.67 23.65 37.94 42.84 0.43 20.94 57.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 45.55 0.91 162.52 0.33 0.00 6.00 37 E10a_E11a KnownJunction 0 0.00 40.19 12.68 33.00 25.13 66.33 32.99 0.00 22.54 57.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43.48 4.71 145.03 2.97 0.00 8.11 38 ER11a ExonRegion 0 0.00 96.72 20.65 45.68 20.05 50.41 49.11 0.03 22.95 69.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 52.71 0.40 180.12 1.13 1.58 9.62 39 E11a_E12a KnownJunction 0 0.00 164.97 32.23 33.96 18.68 69.22 68.81 1.93 24.28 59.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43.53 0.00 161.45 2.35 2.69 15.19 40 ER12a ExonRegion 0 0.02 96.32 21.24 43.86 15.97 52.07 48.19 1.76 20.62 76.88 0.00 0.00 0.00 0.00 0.00 0.05 0.00 55.59 0.00 177.49 0.13 2.89 12.57 41 E12a_E13b KnownJunction 0 0.00 77.82 37.14 56.44 16.64 39.98 78.87 4.60 26.85 67.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 61.93 0.00 151.87 0.00 5.20 8.11 42 ER13a ExonRegion 0 12.88 2.69 0.83 1.39 8.85 5.00 3.71 2.43 2.62 0.29 8.57 5.20 6.93 2.44 1.74 5.99 0.00 0.32 0.00 2.67 1.03 0.02 0.03 43 E13_Ab KnownBoundary 0 0.00 0.00 2.72 2.06 0.00 0.00 0.00 0.00 5.93 0.00 5.11 11.85 33.76 4.24 0.00 14.61 0.00 0.00 0.00 2.56 0.00 0.00 0.00 44 ER13b ExonRegion 0 0.93 73.75 24.75 43.89 24.83 47.84 47.54 4.04 28.91 68.82 15.46 6.73 12.08 1.60 2.53 6.22 3.63 55.63 0.00 167.84 0.00 3.55 12.66 45 E13a_E14a KnownJunction 0 3.19 114.78 16.38 46.05 40.75 32.03 81.88 3.78 29.57 51.06 19.27 6.45 12.50 2.47 0.00 4.19 0.00 44.98 0.00 169.96 0.00 2.63 8.62 46 ER14a ExonRegion 0 19.14 118.73 14.00 38.72 20.02 47.03 53.79 2.92 24.25 54.74 12.15 5.86 20.06 3.11 3.12 2.35 2.53 31.83 0.00 148.57 0.00 1.66 3.16 47 E14a_E15a KnownJunction 0 18.08 116.56 14.84 43.15 11.46 40.89 54.76 3.61 25.58 55.17 2.05 11.40 25.32 0.00 19.66 4.36 0.00 21.93 0.00 195.14 0.00 2.88 8.11 48 ER15a ExonRegion 0 9.18 118.49 10.62 45.50 21.78 38.62 50.42 2.26 23.46 58.17 4.74 7.51 9.34 4.04 5.73 1.99 1.39 41.06 0.00 181.71 0.00 1.36 6.94 49 E15a_E16a KnownJunction 0 19.93 141.55 6.09 35.63 32.26 38.95 93.85 1.89 25.26 61.65 0.00 0.00 44.15 0.00 0.00 0.00 0.00 29.85 0.00 201.47 0.00 2.33 11.78 50 ER16a ExonRegion 0 15.92 133.45 9.73 50.84 27.49 29.39 63.67 0.00 18.37 59.32 8.01 3.95 18.76 1.62 11.56 0.00 1.20 26.27 0.00 152.48 0.00 0.21 7.58 51 E16a_E17a KnownJunction 0 7.56 148.92 10.32 67.86 41.17 33.16 74.99 0.00 12.21 60.71 5.05 23.26 6.82 0.00 10.63 0.00 0.00 16.87 0.00 154.23 0.00 0.00 0.00 52 E16a_E18a KnownJunction 0 10.82 3.35 0.00 1.40 3.31 2.33 6.76 0.00 1.27 2.95 2.21 0.00 0.00 2.88 0.00 0.00 4.77 0.00 0.00 0.00 0.00 0.00 0.00 53 ER17a ExonRegion 0 4.99 142.08 9.02 40.21 39.28 28.55 56.05 0.00 16.38 53.93 6.26 9.64 11.50 0.81 4.32 1.17 0.00 15.18 0.00 132.72 0.00 1.26 0.00 54 E17a_E18a KnownJunction 0 9.48 196.35 7.63 33.56 41.26 45.14 95.26 0.00 14.06 46.85 7.16 5.55 12.82 0.00 4.45 4.19 0.00 7.46 0.00 102.78 0.00 0.00 0.00 55 ER18a ExonRegion 0 15.58 195.17 11.16 39.79 27.65 35.71 84.11 3.36 21.82 53.30 4.03 5.05 21.63 2.35 7.09 2.81 2.38 13.55 0.00 100.18 0.00 0.00 3.51 56 E18a_E19a KnownJunction 0 21.26 207.66 14.84 39.19 34.38 29.13 70.75 6.70 24.88 43.60 2.63 6.30 28.24 2.47 11.13 4.02 0.00 13.27 0.00 111.66 0.00 0.00 4.10 57 ER19a ExonRegion 0 10.20 165.22 14.90 51.86 36.87 27.40 64.58 4.81 27.94 56.00 10.49 8.13 30.37 2.32 7.04 4.64 0.00 17.85 0.00 109.50 0.00 1.88 4.55 58 E19a_E20a KnownJunction 0 7.19 212.33 19.43 66.82 53.57 47.59 92.61 8.95 30.96 59.98 17.79 12.60 32.79 2.41 6.30 3.42 0.00 21.51 0.00 141.90 0.00 3.12 8.54 59 ER20a ExonRegion 0 17.40 171.76 22.49 56.24 26.90 26.14 49.63 6.67 21.28 53.46 12.04 8.94 29.22 1.04 8.35 3.82 1.85 19.98 0.00 110.94 1.24 0.64 8.62 60 E20a_E21a KnownJunction 0 38.60 230.62 28.71 64.19 38.03 31.69 71.68 10.60 24.13 58.91 17.69 13.65 20.45 4.89 5.81 0.00 0.00 14.96 0.00 122.78 0.00 0.00 7.51 61 ER21a ExonRegion 0 15.94 179.64 22.76 60.52 45.11 39.70 67.93 7.72 21.08 60.88 11.77 8.88 27.04 6.41 7.76 5.60 0.60 40.58 0.00 118.54 0.94 0.41 2.52 62 E21a_E22a KnownJunction 0 20.23 237.26 25.07 51.87 87.61 40.60 116.19 14.21 14.18 68.98 16.48 0.00 6.17 0.00 8.90 8.54 4.21 56.21 0.00 133.14 3.03 2.82 8.19 63 ER22a ExonRegion 0 17.50 169.07 28.11 56.55 52.96 40.85 65.02 6.72 23.40 63.20 10.11 5.29 20.01 4.62 7.07 6.67 2.15 43.89 0.00 135.51 0.88 2.28 8.66 64 E22a_E23a KnownJunction 0 22.89 201.28 22.41 81.71 29.80 54.46 61.08 6.57 33.48 73.33 9.84 6.00 26.30 9.54 8.90 14.44 0.00 62.26 0.00 172.83 2.84 2.57 7.85 65 ER23a ExonRegion 0 19.07 140.93 23.31 57.75 34.09 37.90 46.94 4.96 26.48 66.31 7.61 8.98 11.67 3.43 12.17 7.39 2.50 53.31 0.00 146.81 2.10 4.01 6.14 66 E23a_E24a KnownJunction 0 12.37 151.68 25.19 61.53 58.57 57.30 66.64 3.61 22.51 74.60 11.48 0.00 14.61 4.83 21.76 0.00 3.74 45.76 0.00 167.97 0.00 14.88 4.35 67 ER24a ExonRegion 0 20.89 142.72 20.37 52.61 34.72 45.40 54.39 3.79 23.00 74.66 13.03 8.21 6.35 3.43 6.25 5.33 4.17 51.52 0.00 151.23 0.73 2.10 9.30 68 E24a_E25a KnownJunction 0 28.67 119.12 20.61 66.06 31.32 34.30 87.40 4.64 26.39 77.50 4.79 0.00 14.77 7.95 8.90 7.95 4.11 57.95 0.00 165.35 0.00 2.33 8.54 69 ER25a ExonRegion 0 17.06 108.27 22.57 51.57 37.26 50.63 56.54 4.33 32.00 83.48 9.91 4.01 11.38 3.85 8.30 7.58 2.65 52.77 1.41 160.36 0.83 1.64 12.55 70 E25a_E26a KnownJunction 0 13.78 127.08 31.99 53.07 30.81 42.42 56.00 4.11 30.58 78.09 2.16 0.00 13.64 11.30 8.90 3.33 3.83 47.09 0.00 139.08 0.00 0.00 4.35 71 E26_Aa NovelBoundary 0 6.52 2.83 2.78 5.36 0.00 20.05 8.04 2.01 1.71 3.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.30 0.00 11.31 0.00 0.00 0.00 72 ER26a ExonRegion 0 22.23 127.24 30.60 73.20 40.03 60.95 61.01 4.80 33.03 89.31 8.29 11.95 19.65 2.59 8.44 10.68 0.27 51.77 4.29 175.59 0.93 2.24 10.68 73 E26_Da KnownBoundary 0 16.67 66.76 12.03 38.09 10.70 23.34 38.82 0.00 14.06 24.26 7.42 13.50 0.00 0.00 0.00 0.00 0.00 27.86 4.05 86.80 0.00 0.00 4.18 74 E26a_E26b KnownJunction 0 56.45 164.38 21.02 65.36 27.25 31.35 38.29 0.00 24.45 69.84 5.00 0.00 27.27 2.30 10.63 12.99 0.00 46.80 4.80 122.40 0.00 5.51 13.06 75 ER26b ExonRegion 0 20.01 85.46 14.97 28.85 19.52 20.10 31.12 2.62 9.08 21.53 2.46 1.71 7.13 0.30 2.10 1.62 0.81 16.41 0.04 69.78 0.22 0.83 2.24 76 E26_Ab KnownBoundary 0 27.93 153.85 14.99 54.04 40.83 19.08 27.56 5.91 9.58 11.93 0.00 0.00 19.80 0.00 4.45 0.00 0.00 22.38 0.00 87.37 0.00 0.00 3.67 77 ER26c ExonRegion 0 50.17 220.40 33.03 83.61 68.05 54.43 77.73 5.75 30.03 76.51 4.75 6.46 13.11 1.84 10.00 2.69 1.93 22.38 0.91 119.17 0.51 2.14 5.98 78 IG47_SR1 SilentIntergenicRegion 0 0.00 17.02 0.00 2.43 0.00 5.11 1.58 0.00 0.00 1.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.22 0.00 0.00 0.00