Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CD27 Gene 0 398.17 15.09 9.24 34.37 99.55 64.75 35.30 55.23 38.40 17.70 36.74 178.96 44.05 486.30 496.05 176.78 37.26 17.50 19.32 20.80 20.68 4.35 11.91 2 266557 Transcript 0 435.85 10.24 5.82 33.25 98.57 51.26 39.16 72.06 45.35 14.54 29.89 218.13 55.74 599.62 583.28 224.73 32.53 11.32 13.99 14.84 13.79 2.78 7.54 3 IG11 Intergenic 0 8.51 27.00 13.74 36.33 17.26 31.73 10.65 16.79 18.89 19.38 9.65 4.67 5.01 7.32 6.63 6.70 5.15 23.44 10.60 27.74 7.03 1.66 2.85 4 IG11_SR1 SilentIntergenicRegion 0 3.26 26.25 10.37 23.17 13.91 32.62 7.83 17.99 13.96 18.61 9.02 6.26 3.57 5.72 7.14 8.21 5.16 25.88 6.70 27.11 6.38 0.57 2.42 5 IG11_AR1 ActiveIntergenicRegion 0 42.48 118.00 65.42 175.79 83.66 152.78 38.54 70.64 88.47 75.47 36.26 12.09 15.37 27.57 26.33 17.82 17.99 76.87 38.16 95.64 32.24 9.24 6.50 6 ER1a ExonRegion 0 304.53 3.59 4.30 21.23 59.07 19.06 23.65 29.81 26.12 11.19 14.07 46.00 10.62 271.16 278.83 133.89 14.84 11.53 7.48 13.42 1.94 0.61 1.73 7 E1_Da NovelBoundary 0 9.63 0.00 6.24 8.82 3.90 7.55 10.07 10.84 6.16 7.25 0.00 6.30 6.33 6.95 4.82 11.96 0.00 28.19 4.61 14.25 2.78 0.00 3.67 8 E1a_E2a KnownJunction 1 92.61 0.00 0.00 22.77 51.95 12.89 10.02 61.28 58.74 7.60 17.43 176.76 51.30 409.50 633.42 403.14 8.60 0.00 0.00 0.00 0.00 0.00 0.00 9 I1 Intron 0 8.43 3.78 3.88 16.72 6.40 2.44 4.57 7.53 2.93 7.72 4.11 0.00 2.93 7.82 9.34 6.32 2.63 24.16 13.54 20.35 3.51 0.00 3.12 10 I1_SR1 SilentIntronRegion 0 6.17 6.00 3.50 20.05 8.45 2.96 5.67 7.65 2.89 9.48 3.91 0.00 4.73 5.83 6.58 8.22 1.41 28.69 17.43 24.75 3.52 0.00 2.84 11 I1_AR1 ActiveIntronRegion 0 12.46 0.17 4.63 11.61 3.13 1.63 2.85 7.52 3.10 4.96 4.55 0.00 0.00 11.37 14.22 3.31 4.74 17.23 7.40 13.55 3.60 0.00 3.68 12 E2_Aa NovelBoundary 0 29.93 2.63 7.30 15.42 12.99 9.54 4.50 8.30 2.81 15.55 5.26 6.30 19.48 11.95 8.90 20.25 0.00 33.66 4.42 17.19 8.53 0.00 4.18 13 ER2a ExonRegion 1 134.51 3.62 4.96 31.82 130.06 51.50 46.10 79.50 54.32 10.95 23.22 232.25 62.89 593.09 571.96 203.73 23.01 7.68 9.85 19.81 2.57 0.81 1.13 14 E2_Da NovelBoundary 0 22.30 6.45 8.28 25.37 27.67 24.82 4.37 3.86 4.60 9.05 4.53 17.26 0.00 23.90 15.70 19.14 8.79 26.49 0.00 18.73 8.09 0.00 0.00 15 E2a_E3a KnownJunction 1 242.93 3.35 0.00 16.68 79.88 55.59 112.61 74.51 42.53 8.19 15.79 219.07 47.56 615.28 590.52 172.26 27.49 0.00 0.00 0.00 0.00 0.00 0.00 16 I2 Intron 0 63.93 45.95 30.41 54.89 68.43 74.77 30.66 22.47 22.49 26.57 30.09 27.43 17.40 40.09 31.77 25.85 22.69 30.49 22.37 37.69 22.15 6.37 16.42 17 I2_SR1 SilentIntronRegion 0 52.18 14.30 8.18 19.77 22.74 8.22 14.12 9.35 7.11 9.24 6.57 34.93 11.00 23.20 18.46 16.08 4.34 10.80 4.92 15.13 4.08 1.45 2.95 18 I2_AR3 ActiveIntronRegion 1 42.96 43.68 6.17 39.78 58.47 39.94 24.13 17.09 15.14 12.57 11.02 11.38 0.00 15.52 8.81 16.40 3.55 14.30 19.70 34.28 0.33 2.78 13.05 19 I2_AR4 ActiveIntronRegion 1 84.33 84.98 57.89 97.66 125.11 149.88 54.75 39.65 41.80 47.30 51.73 29.08 22.86 58.11 46.80 33.15 39.96 57.14 44.43 68.38 42.12 10.77 30.85 20 I2_SR2 SilentIntronRegion 0 55.44 7.13 3.81 4.53 21.74 23.86 3.82 3.29 1.50 3.00 2.87 9.50 5.60 22.19 15.86 8.34 1.63 5.94 1.58 5.31 2.16 1.05 2.91 21 I2_AR6 ActiveIntronRegion 1 45.06 18.51 12.54 30.69 25.73 26.45 9.09 10.17 9.48 15.84 32.85 19.07 23.40 37.03 29.04 37.26 23.81 8.04 4.92 12.06 13.99 7.16 10.09 22 E3_Aa NovelBoundary 0 54.23 22.17 15.08 30.23 22.67 44.46 13.34 17.37 9.17 20.93 52.96 25.36 12.66 50.09 41.91 26.66 48.15 13.56 8.94 21.35 23.97 8.57 3.93 23 ER3a ExonRegion 1 782.30 10.21 10.31 43.39 64.93 27.28 26.74 92.65 51.52 19.19 39.08 244.83 90.02 740.55 696.64 252.23 40.51 12.20 5.38 11.44 16.85 7.67 17.44 24 E3_Da NovelBoundary 0 48.38 46.44 82.14 99.95 69.19 75.01 46.81 64.32 58.82 59.07 48.38 12.60 26.30 40.73 67.50 53.06 36.75 108.44 64.57 85.78 38.49 10.35 23.05 25 E3a_E4a KnownJunction 1 763.10 3.03 0.00 5.86 43.97 21.52 12.67 76.48 24.62 8.54 4.42 178.26 59.74 660.90 554.42 146.37 18.42 0.00 0.00 0.00 0.00 0.00 0.00 26 I3 Intron 1 63.16 63.44 48.55 99.72 72.59 133.32 30.17 47.51 51.93 51.93 77.60 11.05 31.43 59.48 67.04 50.78 35.82 84.47 50.12 73.30 53.80 14.13 29.48 27 I3_AR1 ActiveIntronRegion 1 63.80 64.10 49.07 100.78 73.34 134.75 30.47 48.02 52.47 52.47 78.43 11.17 31.77 60.11 67.74 51.33 36.19 85.36 50.62 74.09 54.38 14.28 29.79 28 E4_Aa NovelBoundary 0 108.24 96.89 117.00 180.56 300.00 346.16 81.57 124.25 94.18 121.36 89.86 17.71 25.16 77.76 90.24 64.34 78.82 145.79 123.77 105.21 137.64 14.88 47.38 29 ER4a ExonRegion 0 701.18 28.56 6.54 52.83 123.20 88.55 28.85 93.01 52.49 23.05 57.32 255.29 66.03 652.95 614.20 220.63 54.65 24.21 43.32 39.88 37.46 5.90 13.35 30 E4_Da NovelBoundary 0 69.27 90.12 66.23 125.43 45.50 85.41 25.00 71.76 72.19 69.22 53.28 17.56 13.31 57.57 69.47 43.66 48.25 92.52 45.65 77.21 77.59 19.47 34.91 31 E4a_E5a KnownJunction 0 339.10 2.57 1.30 33.83 130.05 45.31 41.69 89.75 40.05 3.33 14.53 194.46 51.94 620.52 607.08 216.52 45.82 0.00 0.00 0.00 0.00 0.00 0.00 32 I4 Intron 1 36.39 82.50 53.97 102.40 129.74 191.65 53.45 33.34 52.26 61.08 50.03 10.97 24.30 41.47 49.19 60.30 43.36 99.36 129.85 67.41 60.42 12.88 53.91 33 I4_AR1 ActiveIntronRegion 1 36.66 83.11 54.38 103.16 130.73 193.10 53.85 33.60 52.65 61.55 50.41 11.06 24.49 41.77 49.56 60.76 43.69 100.12 130.84 67.91 60.85 12.98 54.31 34 E5_Aa NovelBoundary 1 30.38 50.71 72.35 142.64 37.95 106.93 26.41 47.81 103.12 98.91 80.23 6.15 80.68 55.33 60.20 56.57 52.55 71.71 92.80 74.02 62.33 5.45 16.13 35 ER5a ExonRegion 0 380.23 37.06 26.86 83.78 169.55 130.41 64.97 96.32 67.58 48.18 74.40 335.93 97.40 810.75 759.86 320.32 63.51 48.89 69.10 55.37 62.92 10.63 34.97 36 E5_Da NovelBoundary 0 91.13 65.12 45.03 78.84 86.84 64.11 25.26 31.22 35.71 34.14 29.43 49.37 32.95 41.44 111.26 47.34 38.43 58.57 43.11 71.14 28.48 2.57 7.34 37 E5a_E6a KnownJunction 1 715.46 0.00 0.00 28.70 119.35 15.16 25.48 65.10 53.44 4.78 25.48 334.16 48.37 821.59 642.07 278.13 14.12 2.57 0.00 5.88 2.66 0.00 0.00 38 I5 Intron 0 40.48 31.33 11.64 20.50 19.19 44.81 15.47 8.21 13.69 12.71 14.38 12.04 17.51 35.35 30.51 25.26 12.28 20.50 25.38 19.78 16.39 4.43 15.60 39 I5_AR1 ActiveIntronRegion 0 40.90 31.66 11.76 20.72 19.39 45.27 15.64 8.30 13.83 12.85 14.53 12.12 17.67 35.71 30.83 25.51 12.40 20.71 25.65 19.99 16.55 4.44 15.75 40 E6_Aa NovelBoundary 0 54.90 0.00 17.27 32.60 33.19 39.07 14.49 17.99 14.90 30.76 9.53 24.76 0.00 33.08 53.16 27.94 3.65 100.44 59.58 59.32 14.64 6.25 26.89 41 ER6a ExonRegion 0 338.38 20.70 9.72 24.80 112.25 96.52 37.91 34.29 27.38 14.90 43.09 182.37 27.32 399.50 467.12 124.82 46.92 17.40 18.73 17.48 27.33 4.95 14.28 42 IG12 Intergenic 0 3.33 1.42 2.23 4.26 3.27 1.60 1.39 1.35 2.89 4.18 8.78 6.27 3.37 14.75 7.15 9.86 6.34 2.89 1.67 2.60 5.39 1.82 0.51 43 IG12_AR1 ActiveIntergenicRegion 0 3.35 1.43 2.25 4.29 3.29 1.60 1.40 1.36 2.91 4.21 8.84 6.32 3.40 14.84 7.20 9.93 6.39 2.91 1.68 2.62 5.43 1.83 0.52