Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CLSTN3 Gene 0 91.54 79.21 238.16 190.58 132.46 256.11 75.79 322.97 496.80 470.55 86.91 17.35 21.96 129.44 125.84 60.22 66.56 175.04 135.75 126.32 120.68 97.24 103.08 2 266546 Transcript 0 152.55 126.65 340.20 278.19 218.40 406.56 124.65 466.50 719.59 678.79 118.46 25.39 35.95 180.56 183.82 85.58 92.37 269.89 216.42 186.69 166.91 143.58 156.68 3 331148 Transcript 0 8.18 0.94 7.03 6.59 2.39 7.98 1.14 7.44 7.03 8.88 1.44 0.25 0.18 3.87 1.70 1.03 1.59 4.34 1.56 3.09 2.91 1.30 1.89 4 IG47 Intergenic 0 20.12 1.69 20.41 5.44 11.12 6.16 10.53 9.87 10.25 27.32 27.19 3.45 2.51 50.71 36.97 20.63 22.79 3.29 3.68 1.08 52.59 42.79 56.59 5 IG47_AR1 ActiveIntergenicRegion 0 18.84 1.55 7.62 1.96 13.75 6.82 11.76 0.97 5.24 18.26 21.07 1.65 1.50 38.88 22.57 12.78 17.36 2.29 3.06 0.00 49.10 33.21 35.24 6 IG47_SR1 SilentIntergenicRegion 0 19.45 1.49 15.46 5.48 13.92 4.90 16.24 11.12 10.35 24.00 29.11 2.26 3.02 56.34 42.92 21.18 27.82 4.36 3.60 2.52 53.50 46.08 61.29 7 IG47_AR2 ActiveIntergenicRegion 0 18.79 3.19 20.10 5.85 18.24 5.78 11.74 12.02 12.37 35.77 33.16 3.76 1.52 58.91 42.05 22.36 31.79 3.68 1.18 0.43 87.88 50.66 71.27 8 IG47_SR2 SilentIntergenicRegion 0 24.42 0.00 21.77 4.09 16.05 9.17 14.67 10.37 10.83 50.20 52.49 2.33 0.72 90.70 48.21 31.55 29.71 5.69 0.00 0.00 76.62 70.36 116.79 9 IG47_AR3 ActiveIntergenicRegion 0 24.22 2.37 31.91 6.91 12.58 6.21 10.23 14.18 12.77 34.58 31.53 5.10 2.23 55.60 40.85 24.77 25.13 3.76 4.64 0.83 53.40 51.28 67.07 10 IG47_AR4 ActiveIntergenicRegion 0 17.76 0.39 11.56 4.18 2.72 9.11 4.63 2.50 7.29 20.10 18.69 2.19 2.95 38.95 28.27 16.43 12.67 1.51 4.26 0.41 42.44 26.95 36.08 11 IG47_AR5 ActiveIntergenicRegion 0 1.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.76 3.25 3.52 9.43 4.04 0.00 0.00 0.00 0.00 0.00 5.98 3.68 0.00 12 ER1a ExonRegion 0 21.39 38.64 95.69 62.80 85.34 252.59 49.67 128.56 223.99 233.01 68.24 5.91 6.84 77.07 80.04 51.79 44.31 168.34 205.24 99.65 77.94 56.80 74.86 13 E1a_E2a KnownJunction 0 36.01 27.63 119.13 69.22 163.33 446.39 96.19 166.06 279.83 303.11 63.65 7.65 6.17 89.00 54.02 22.73 35.25 128.80 118.22 131.22 56.77 35.03 36.54 14 I1 Intron 0 19.70 1.01 7.01 4.21 9.33 6.40 8.02 10.99 13.88 19.33 12.48 2.87 4.15 29.75 15.91 12.19 15.25 5.74 5.33 4.36 52.55 31.08 46.44 15 I1_AR1 ActiveIntronRegion 0 5.27 0.34 3.12 1.06 2.72 4.07 6.15 6.03 11.79 17.16 3.05 0.00 2.94 22.05 14.56 10.78 10.24 0.00 12.58 1.23 30.63 13.98 31.90 16 I1_SR2 SilentIntronRegion 0 4.10 0.68 4.52 3.17 6.45 4.10 5.65 5.97 14.15 15.49 8.49 0.66 0.84 28.77 16.22 7.74 12.13 2.37 10.85 0.84 42.47 16.91 39.04 17 I1_AR2 ActiveIntronRegion 0 4.89 1.87 4.22 2.74 7.61 6.64 10.54 3.87 7.96 15.70 13.55 7.50 4.40 34.73 17.08 7.11 19.94 6.53 1.81 5.26 55.93 11.86 40.63 18 I1_SR3 SilentIntronRegion 0 7.52 0.52 3.93 2.25 5.78 4.67 5.26 4.88 6.95 9.31 8.18 2.00 2.70 21.21 12.68 6.56 11.62 2.57 4.87 4.05 38.07 16.82 28.46 19 I1_AR3 ActiveIntronRegion 0 12.10 1.07 2.03 6.35 6.56 12.25 6.30 9.23 11.30 6.75 7.73 0.00 3.27 29.51 10.78 6.11 7.60 1.99 2.04 5.62 43.20 16.35 41.00 20 I1_SR4 SilentIntronRegion 0 22.16 1.32 8.55 5.53 8.47 7.60 9.31 12.94 12.08 22.59 9.71 2.06 1.37 28.62 15.86 12.61 17.86 6.17 2.46 4.77 47.30 28.94 44.29 21 I1_AR4 ActiveIntronRegion 0 36.98 1.23 10.43 5.55 14.60 7.37 10.07 17.77 21.48 27.72 20.53 4.87 8.72 37.28 18.86 19.10 18.20 9.83 5.58 5.92 74.16 54.42 67.09 22 E2_Aa NovelBoundary 0 74.83 5.53 14.99 8.22 12.22 21.29 8.39 10.35 30.56 27.72 24.06 0.00 8.28 24.31 18.54 15.55 12.16 11.32 3.67 11.70 76.05 45.37 67.01 23 ER2a ExonRegion 0 104.07 115.14 143.51 113.84 150.17 500.36 127.81 216.60 405.31 393.07 109.81 27.03 23.64 128.41 124.14 59.68 62.80 169.75 119.33 170.63 142.61 102.92 112.14 24 E2a_E3a KnownJunction 0 127.65 135.30 151.53 126.32 64.43 241.51 63.95 238.76 424.07 478.73 121.14 31.21 43.50 147.92 123.99 34.26 49.65 209.67 112.94 177.69 174.52 58.54 136.15 25 ER3a ExonRegion 0 60.88 51.50 145.47 121.92 74.12 187.52 53.45 253.53 458.42 450.99 98.80 30.20 28.04 157.55 117.72 63.39 79.90 196.70 115.50 152.20 147.50 103.47 130.26 26 E3a_E4a KnownJunction 0 111.35 67.55 192.78 167.88 97.11 231.91 73.97 350.48 584.69 612.21 128.61 18.91 12.17 270.47 228.07 71.18 104.16 209.92 234.83 282.90 180.20 134.90 158.01 27 ER4a ExonRegion 0 95.55 74.04 262.09 210.69 161.24 261.08 94.98 417.74 721.37 698.77 116.04 18.93 26.70 178.63 145.33 84.94 107.92 236.92 166.29 216.10 180.03 141.83 164.21 28 E4a_E5a KnownJunction 0 149.21 157.47 322.22 261.57 263.07 463.43 117.30 451.16 728.99 702.52 116.56 50.72 47.40 193.36 183.82 98.35 115.75 256.89 245.28 242.76 163.59 142.61 144.86 29 ER5a ExonRegion 0 108.68 103.51 265.15 213.85 190.58 347.42 94.37 397.12 691.19 690.31 129.92 33.60 31.27 188.03 131.91 87.72 106.29 238.88 220.75 172.98 166.88 136.91 147.95 30 E5a_E6a KnownJunction 0 138.25 78.74 312.29 247.99 230.39 427.71 133.50 466.72 761.97 738.17 167.52 47.87 52.59 192.01 116.94 91.34 117.34 254.15 190.22 193.99 237.10 122.83 203.68 31 ER6a ExonRegion 0 108.90 93.50 229.55 210.93 197.20 349.65 127.88 394.80 674.72 644.22 138.72 38.52 26.63 191.38 132.33 92.49 103.57 274.42 186.81 152.55 167.40 144.41 151.47 32 E6a_E7a KnownJunction 0 131.28 138.79 257.89 202.67 200.93 403.74 125.82 373.90 668.83 591.72 133.56 18.61 29.06 168.40 128.44 82.63 110.33 276.62 248.48 138.13 144.37 144.76 154.08 33 ER7a ExonRegion 0 127.83 133.78 300.15 235.92 160.36 366.51 122.71 444.33 713.20 667.80 136.21 23.51 28.92 169.29 156.84 80.46 99.42 281.09 152.62 192.70 167.61 138.26 132.53 34 E7_Da NovelBoundary 0 20.89 13.29 33.20 56.80 12.65 46.11 35.07 63.66 71.01 52.65 20.22 0.00 0.00 9.42 22.25 7.18 4.77 29.76 35.11 26.08 6.12 34.66 24.67 35 E7a_E8a KnownJunction 1 104.46 127.81 366.72 288.81 390.24 602.38 173.43 640.67 901.64 838.68 116.35 12.60 74.83 170.70 147.35 80.15 77.70 318.44 220.62 263.34 198.55 145.86 180.37 36 E7a_E9a NovelJunction 0 2.89 2.50 5.20 0.00 3.99 0.00 0.00 0.00 1.27 0.00 5.26 0.00 0.00 4.94 4.45 6.66 4.77 2.57 0.00 0.00 3.03 15.49 4.18 37 I7 Intron 0 21.71 19.24 28.36 48.12 28.03 37.49 24.58 35.72 57.04 55.80 14.38 3.72 6.76 15.22 17.63 11.16 9.78 26.54 19.33 20.90 15.60 18.96 20.79 38 I7_AR1 ActiveIntronRegion 0 22.23 25.89 34.24 54.51 27.49 34.96 22.65 44.97 65.52 67.42 22.58 5.84 5.81 13.57 17.88 15.93 15.05 28.89 25.61 27.14 19.36 23.71 27.13 39 I7_SR1 SilentIntronRegion 0 21.48 15.13 24.77 44.30 28.50 39.26 25.91 30.03 51.92 48.70 9.26 2.39 7.38 16.34 17.56 8.20 6.48 25.18 15.45 17.05 13.29 16.04 16.87 40 E8_Aa NovelBoundary 0 18.30 18.42 56.24 48.28 28.18 63.71 33.52 58.16 56.37 61.19 6.79 6.30 7.95 20.72 4.45 8.63 0.00 27.57 36.90 23.33 23.17 26.88 29.11 41 ER8a ExonRegion 0 105.96 83.05 314.20 233.84 167.77 328.87 103.30 518.84 792.39 751.25 123.79 26.28 53.08 173.34 185.22 87.09 89.71 258.77 186.87 244.91 182.44 145.79 159.72 42 E8a_E9a KnownJunction 0 106.83 114.26 361.78 275.42 150.85 275.24 116.37 555.77 884.48 815.66 103.39 19.96 52.11 253.81 310.90 100.40 97.43 393.39 333.09 231.25 217.21 224.30 231.50 43 I8 Intron 0 24.61 14.34 12.71 11.99 24.87 10.32 11.46 20.99 18.12 13.38 2.92 2.94 4.07 2.92 5.65 2.31 2.87 5.30 5.25 6.43 3.73 5.34 3.50 44 I8_AR1 ActiveIntronRegion 0 39.13 18.95 17.48 18.27 43.94 13.52 16.80 26.83 20.18 16.33 2.65 5.36 5.80 3.40 6.17 2.98 2.32 3.31 5.74 5.82 1.76 6.77 2.06 45 ER9a ExonRegion 0 127.04 116.90 355.24 295.34 181.80 349.31 109.71 558.91 848.55 843.01 114.91 28.71 46.99 209.66 214.69 83.69 109.01 258.12 221.90 213.82 193.26 156.34 179.01 46 E9a_E10a KnownJunction 0 233.60 136.88 321.22 328.70 409.17 656.95 184.25 572.12 894.52 795.95 104.03 7.35 39.12 192.77 172.94 87.50 122.30 350.82 221.65 179.99 185.52 117.32 137.43 47 ER10a ExonRegion 0 313.79 203.13 346.83 378.43 493.72 713.76 217.28 564.28 973.98 893.08 168.84 51.31 43.77 306.45 306.46 147.95 145.79 403.22 425.31 262.61 214.21 265.38 291.71 48 E10a_E11a KnownJunction 0 320.06 221.01 428.13 477.33 310.95 407.78 223.42 557.17 933.18 886.20 137.14 24.76 71.10 226.56 275.79 102.02 100.33 381.54 462.23 224.99 154.07 270.71 300.56 49 E10a_E13a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.28 0.00 0.00 11.31 2.88 0.00 50 ER11a ExonRegion 0 127.47 124.58 377.22 357.28 169.27 322.81 110.27 499.84 772.77 730.83 104.87 26.17 43.75 185.11 161.97 79.38 103.83 286.93 185.74 186.08 124.89 139.48 154.16 51 E11a_E12a KnownJunction 0 167.59 190.43 472.93 467.74 258.57 539.29 166.80 557.46 953.87 770.94 120.77 24.01 51.30 193.13 256.26 146.37 90.23 403.38 329.14 245.76 128.44 243.65 210.25 52 E11a_E13a NovelJunction 0 0.00 0.00 1.54 0.00 0.00 0.00 2.25 2.01 4.75 0.00 2.26 0.00 0.00 4.83 0.00 4.02 0.00 0.00 0.00 2.62 2.72 9.37 3.93 53 ER12a ExonRegion 0 129.38 146.87 349.61 314.85 266.52 421.00 133.31 458.34 716.43 661.90 108.07 25.72 22.44 170.00 171.35 82.00 89.06 313.89 193.41 188.33 130.21 146.17 147.58 54 E12a_E13a KnownJunction 0 172.40 201.02 387.72 274.86 215.62 437.02 145.43 404.13 641.54 604.39 105.50 18.91 33.93 145.09 183.94 52.29 95.47 243.46 193.61 181.84 172.85 124.00 106.45 55 ER13a ExonRegion 0 191.92 158.11 431.00 322.79 220.41 402.05 126.86 518.47 737.97 669.67 118.44 22.37 29.94 179.84 188.19 82.25 102.20 258.56 180.49 182.48 177.96 135.14 137.40 56 E13a_E14a KnownJunction 0 238.93 168.13 510.42 370.55 263.84 581.48 171.31 636.61 799.73 711.92 110.40 19.36 26.46 191.24 215.22 107.75 134.27 251.62 256.48 178.01 199.36 175.07 158.69 57 ER14a ExonRegion 0 147.56 139.44 460.88 348.64 185.61 406.19 123.74 568.44 820.43 725.17 113.60 17.39 19.14 179.55 215.08 105.14 88.64 276.50 177.11 158.33 175.50 141.28 158.46 58 E14a_E15a KnownJunction 0 185.00 176.55 624.99 470.14 314.35 434.18 132.09 725.24 925.19 893.43 154.14 50.12 48.37 195.60 234.25 132.96 91.82 377.23 331.77 147.52 172.48 185.42 193.86 59 ER15a ExonRegion 0 174.50 131.36 447.99 346.59 197.86 337.39 105.98 500.93 755.70 708.06 140.97 20.70 27.88 157.22 220.71 102.36 71.10 240.87 196.99 158.64 194.59 147.49 134.44 60 E15a_E16a KnownJunction 0 370.81 176.81 655.77 508.49 300.34 475.64 163.31 742.74 1012.69 956.29 154.25 41.11 55.52 205.25 255.39 119.28 94.81 398.74 249.70 174.69 223.45 185.84 191.81 61 ER16a ExonRegion 0 206.70 148.24 467.44 346.62 164.03 368.01 111.92 578.83 745.76 715.60 114.58 25.09 31.62 157.68 195.24 90.34 71.96 238.75 167.72 152.08 172.49 135.40 134.70 62 E16a_E18a KnownJunction 0 224.93 148.13 380.92 270.56 352.21 600.68 136.99 533.06 663.68 656.26 93.29 17.41 25.00 160.28 280.12 66.05 72.46 216.76 193.79 129.75 159.20 106.61 125.74 63 E16a_E19a NovelJunction 0 3.63 5.85 27.47 40.35 8.06 7.21 0.00 12.16 6.19 14.16 0.00 0.00 6.17 2.47 4.70 0.00 4.02 2.03 3.58 7.67 2.66 0.00 0.00 64 I16_AR2 ActiveIntronRegion 0 6.86 17.57 13.34 14.63 14.57 14.25 9.24 12.47 21.19 17.45 4.97 3.56 2.84 12.16 8.04 6.69 2.26 9.50 6.16 16.96 6.19 5.77 14.47 65 ER17a ExonRegion 0 12.95 3.77 23.25 23.79 5.17 22.39 4.52 26.15 21.74 29.48 5.17 0.99 0.71 12.97 6.78 4.11 3.35 13.55 3.23 10.00 9.35 5.19 7.57 66 E17a_E18a KnownJunction 0 19.78 0.00 0.00 0.00 0.00 7.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 67 ER18a ExonRegion 0 93.87 84.55 356.58 246.85 204.74 311.01 80.28 406.07 563.51 559.81 93.58 13.50 22.96 155.75 178.48 71.29 64.99 191.55 157.67 118.17 138.13 100.02 101.45 68 E18_Da KnownBoundary 0 0.00 3.35 11.41 5.16 16.30 0.00 0.00 9.86 13.28 13.54 2.47 0.00 0.00 0.00 0.00 0.00 0.00 6.47 4.33 5.50 6.30 0.00 0.00 69 E18a_E19a KnownJunction 0 64.23 51.04 368.23 257.68 155.94 276.66 75.96 402.94 635.38 567.24 73.12 5.85 27.11 153.57 151.43 48.28 63.30 133.23 97.70 133.01 124.91 83.77 89.89 70 ER18b ExonRegion 0 0.00 0.00 4.86 2.58 4.38 1.70 0.02 3.61 6.38 6.05 0.60 0.00 0.00 2.51 0.00 0.00 3.00 3.80 3.01 2.36 2.28 0.00 0.00 71 E18b_E19a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 72 ER19a ExonRegion 0 59.96 42.40 183.04 145.63 85.26 139.26 35.84 232.70 338.63 304.62 57.87 9.81 17.43 95.51 93.98 32.58 43.46 68.85 77.69 67.63 84.09 62.06 58.03