Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PHC1 Gene 0 85.74 125.39 76.73 149.39 88.42 102.13 65.33 99.75 106.53 145.13 33.38 14.43 24.92 28.58 24.10 27.24 29.35 73.82 71.53 67.66 40.34 47.33 44.86 2 433083 Transcript 0 2.04 3.84 7.17 22.93 25.05 57.80 14.31 17.50 24.10 10.99 0.87 0.32 0.00 1.23 0.48 0.00 1.02 16.06 23.54 24.92 4.63 0.16 1.06 3 433847 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 2.65 0.00 0.00 0.00 0.00 0.00 1.17 0.00 0.00 0.00 0.00 0.00 0.00 1.06 0.00 0.00 0.00 4 251757 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ER1a ExonRegion 0 2.36 2.18 2.61 1.93 0.40 2.49 0.30 2.36 4.41 5.79 3.47 1.29 0.00 4.94 1.92 0.00 4.09 3.10 11.03 6.12 18.50 0.64 4.25 6 E1_Ab KnownBoundary 0 6.74 6.51 8.19 12.99 7.30 10.68 4.37 15.57 28.99 27.26 14.74 0.00 0.00 14.24 0.00 18.88 13.37 27.98 60.61 24.03 48.19 11.27 19.21 7 ER1b ExonRegion 0 0.36 0.59 9.83 13.59 1.75 9.91 0.98 22.41 38.45 34.68 16.85 1.70 1.84 8.91 1.74 2.64 14.99 15.75 20.09 19.25 35.26 15.25 14.27 8 E1_Da NovelBoundary 0 0.00 3.03 1.74 1.90 0.00 0.00 0.00 5.09 20.98 8.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29.64 13.46 0.00 0.00 0.00 0.00 9 E1a_E2a KnownJunction 0 0.00 0.00 1.24 7.23 0.00 10.68 2.16 0.00 3.27 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.68 8.56 11.63 0.00 0.00 0.00 10 E1a_E3a KnownJunction 0 0.00 0.00 25.75 17.11 7.13 2.84 3.44 43.83 44.24 52.03 28.11 5.25 5.84 29.96 5.81 7.43 16.55 50.32 26.35 20.45 45.84 17.57 11.44 11 I1 Intron 0 3.52 12.68 6.53 33.47 22.14 30.82 13.33 26.05 63.88 38.62 0.08 0.74 0.32 0.17 0.58 0.74 0.41 43.96 26.52 34.63 3.85 1.73 1.22 12 I1_SR1 SilentIntronRegion 0 0.85 5.72 2.76 11.34 5.44 24.88 6.38 6.37 32.97 28.54 0.00 0.00 0.00 0.00 0.00 1.19 0.00 36.39 19.06 18.55 2.65 1.10 0.00 13 I1_AR1 ActiveIntronRegion 0 2.69 6.12 6.52 37.01 15.78 31.37 13.83 27.90 75.66 57.26 0.00 1.56 0.28 0.21 1.11 1.42 1.57 60.14 33.13 51.00 6.58 2.88 4.20 14 I1_SR2 SilentIntronRegion 0 4.44 15.79 7.24 36.29 28.05 31.52 15.28 29.17 67.01 33.47 0.00 0.62 0.46 0.21 0.54 0.46 0.00 43.79 25.34 32.00 3.43 1.45 0.23 15 I1_AR2 ActiveIntronRegion 0 3.59 21.10 6.83 32.42 24.73 32.39 8.61 25.18 48.28 28.00 0.86 0.00 0.00 0.00 0.00 0.00 0.00 8.89 23.52 22.35 0.00 0.92 0.00 16 E2a_E3a KnownJunction 0 5.78 8.22 13.93 55.00 73.94 156.10 43.90 43.25 62.35 22.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34.07 52.99 53.56 0.00 0.00 0.00 17 ER2a ExonRegion 0 0.00 4.97 10.89 27.56 25.87 61.94 10.89 24.39 26.35 14.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22.38 21.59 28.37 0.00 0.00 0.00 18 ER3a ExonRegion 0 7.33 27.00 44.66 120.14 30.72 79.45 20.60 128.52 187.84 156.79 43.96 8.66 16.70 24.36 11.39 13.58 32.21 151.10 58.52 75.31 102.13 49.67 74.70 19 E3a_E4a KnownJunction 0 0.00 15.26 64.69 232.90 26.40 55.25 10.11 193.79 273.67 204.74 84.39 37.21 49.51 39.56 19.04 63.23 46.28 205.07 102.87 133.20 166.30 133.12 116.35 20 E3a_E5a NovelJunction 0 0.00 0.00 1.24 5.19 0.00 0.00 0.00 7.43 8.39 5.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.38 8.56 2.62 0.00 2.94 0.00 21 ER4a ExonRegion 0 0.97 12.77 34.74 96.54 4.39 19.71 6.76 89.47 135.66 118.76 30.56 7.10 18.04 20.65 9.28 22.65 26.62 69.78 38.97 66.86 65.12 40.13 39.45 22 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 ER5a ExonRegion 0 1.33 4.92 17.37 68.38 18.90 66.54 21.07 48.61 87.59 33.06 9.55 1.76 13.43 1.64 2.97 4.51 7.91 60.41 17.54 29.76 45.73 49.39 58.15 24 E5a_E6a KnownJunction 1 3.48 28.48 22.56 56.67 23.09 57.07 22.74 42.84 47.60 56.14 2.68 6.30 40.58 9.89 0.00 23.58 3.74 141.94 17.51 32.09 10.32 28.41 41.23 25 E5a_E7a NovelJunction 0 3.19 9.93 14.19 5.09 0.00 2.78 1.81 10.47 13.86 19.69 23.06 0.00 6.82 19.25 0.00 11.19 4.11 33.29 34.54 22.88 33.73 15.49 50.71 26 ER6a ExonRegion 0 1.33 9.98 19.97 31.26 1.20 12.21 5.87 27.91 46.33 63.76 15.45 10.07 6.10 7.76 3.77 8.72 16.70 64.24 23.36 25.25 15.19 14.61 12.84 27 E6a_E7a KnownJunction 0 2.89 14.87 19.93 13.58 0.00 21.58 2.25 13.68 37.64 61.19 6.74 0.00 0.00 4.47 0.00 4.19 4.02 46.30 27.11 9.20 12.48 2.88 7.85 28 E6a_E8a NovelJunction 0 3.11 0.00 1.83 0.00 0.00 0.00 0.00 1.64 3.41 1.64 7.95 0.00 0.00 9.36 4.45 7.86 4.77 12.39 7.25 0.00 2.78 2.88 0.00 29 I6 Intron 0 4.98 9.35 7.28 16.40 19.69 12.74 10.42 11.58 9.78 8.91 1.58 0.00 1.58 1.75 1.47 1.82 1.69 8.55 8.78 15.87 4.05 1.70 2.40 30 I6_AR1 ActiveIntronRegion 0 5.37 10.54 9.50 20.58 24.48 15.68 13.34 14.62 12.80 11.11 2.13 0.00 1.60 2.26 1.98 2.46 2.17 9.77 9.51 17.65 3.65 1.99 2.43 31 E7_Aa NovelBoundary 0 0.00 9.14 11.65 16.35 26.40 10.16 2.16 10.72 11.52 11.68 4.37 0.00 6.82 0.00 0.00 3.33 8.79 19.90 0.00 44.68 8.53 0.00 0.00 32 ER7a ExonRegion 0 7.90 24.09 59.58 80.86 10.50 40.92 16.28 83.01 138.29 180.03 34.43 6.83 20.56 23.17 17.57 27.21 31.61 107.18 50.88 71.99 46.91 36.78 35.52 33 E7a_E8a KnownJunction 0 3.41 26.38 9.88 24.01 24.36 67.01 14.18 23.37 43.60 49.96 11.58 14.40 6.33 3.00 4.70 0.00 25.71 48.54 25.51 8.88 8.09 5.57 7.34 34 ER8a ExonRegion 0 4.46 5.27 20.47 36.65 1.94 11.19 3.47 73.79 44.38 65.72 10.17 4.51 15.08 11.32 7.87 12.85 9.12 41.79 37.46 30.63 17.33 23.91 36.28 35 E8a_E9a KnownJunction 1 21.11 10.98 94.17 198.54 29.03 54.80 10.78 240.61 270.37 375.74 102.08 6.30 33.76 94.41 22.25 76.99 92.66 407.57 284.90 203.38 179.90 148.06 141.36 36 E9_Aa NovelBoundary 1 3.33 2.96 0.00 3.13 4.33 11.24 12.94 7.23 4.89 7.15 0.00 6.00 27.27 0.00 0.00 4.36 3.74 2.03 0.00 2.88 5.75 0.00 8.19 37 ER9a ExonRegion 0 8.77 10.54 42.71 90.76 6.26 15.50 10.84 79.57 116.53 166.14 31.31 6.97 39.17 18.59 14.54 24.26 25.97 64.07 53.68 68.93 53.06 39.04 38.73 38 E9_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39 E9a_E9b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40 ER9b ExonRegion 0 12.90 35.82 0.00 0.00 8.74 23.67 20.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.57 0.00 0.00 0.00 41 E9_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42 ER9c ExonRegion 0 0.82 5.20 11.20 24.56 24.00 50.55 17.23 11.75 21.60 10.79 0.00 1.23 17.62 1.13 1.86 7.20 0.00 47.52 8.48 14.67 0.00 5.00 17.90 43 E9_Db NovelBoundary 0 3.70 12.23 8.84 11.22 16.04 39.52 20.80 13.72 11.02 20.31 0.00 0.00 0.00 7.24 0.00 0.00 0.00 5.93 4.61 3.20 5.50 5.02 3.50 44 E9b_E10a KnownJunction 1 0.00 22.43 59.70 107.15 42.78 85.97 5.43 54.71 90.42 71.02 16.69 6.30 52.76 9.01 18.42 49.30 8.23 232.93 77.93 78.81 7.29 49.54 100.64 45 E9_Dc NovelBoundary 0 8.82 15.46 3.25 18.31 23.43 22.37 12.06 7.11 9.64 19.42 4.53 6.60 0.00 0.00 0.00 3.93 0.00 11.36 4.33 8.88 2.41 13.90 19.80 46 ER9d ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 5.30 0.00 0.00 0.00 0.00 0.00 2.35 0.00 0.00 0.00 0.00 0.00 0.00 2.13 0.00 0.00 0.00 47 I9 Intron 0 61.56 41.32 12.37 71.62 54.37 80.36 41.15 35.15 32.08 67.59 9.82 16.08 26.11 16.75 5.05 10.95 17.75 4.95 16.18 18.86 14.03 24.90 21.35 48 I9_AR1 ActiveIntronRegion 0 61.80 41.48 12.41 71.89 54.59 80.67 41.31 35.28 32.21 67.85 9.86 16.15 26.21 16.82 5.07 11.00 17.82 4.97 16.25 18.94 14.08 25.00 21.44 49 E10_Aa NovelBoundary 0 50.45 28.74 20.14 86.54 38.37 123.85 49.02 55.82 48.09 87.17 13.79 0.00 6.17 21.25 10.75 11.62 8.42 18.24 20.99 25.95 28.17 46.72 63.77 50 ER10a ExonRegion 1 2.37 2.61 65.64 150.98 0.18 1.64 0.67 110.11 154.72 235.40 41.95 2.90 7.73 9.93 10.64 13.23 39.05 37.54 28.69 91.82 46.28 34.65 27.24 51 E10a_E11a KnownJunction 0 19.78 33.81 129.59 291.97 42.70 29.64 8.44 185.29 282.93 372.25 17.37 11.70 30.19 2.30 0.00 3.76 12.81 194.87 24.38 18.86 7.78 4.65 13.15 52 ER11a ExonRegion 0 69.12 77.92 98.06 207.27 59.09 111.97 59.07 145.35 219.81 300.13 67.45 16.89 49.31 41.63 22.98 42.31 61.53 179.05 121.72 143.99 101.42 87.94 89.07 53 E11a_E12a KnownJunction 0 6.52 33.88 53.34 122.86 23.77 28.34 2.25 64.45 75.38 100.14 24.43 12.60 27.76 36.85 29.54 36.91 24.31 88.25 122.92 68.46 32.12 75.13 58.64 54 ER12a ExonRegion 0 0.94 1.31 8.96 22.99 11.19 25.96 7.07 7.85 12.86 12.57 0.82 4.44 11.66 6.78 7.87 5.79 1.72 18.77 18.45 9.95 3.62 13.70 7.38 55 E12_Da NovelBoundary 0 0.00 5.79 3.13 3.86 10.36 2.50 8.08 12.86 2.52 6.31 0.00 0.00 13.64 4.89 0.00 0.00 4.77 12.85 7.44 6.26 14.21 0.00 6.83 56 E12a_E13a KnownJunction 0 14.22 12.04 4.94 14.85 49.92 95.34 51.89 11.21 12.21 13.38 7.48 0.00 0.00 5.95 5.69 8.37 3.46 12.60 15.81 5.62 3.15 2.51 7.85 57 I12_AR3 ActiveIntronRegion 0 10.97 26.80 9.40 16.38 9.28 8.60 14.53 14.20 17.94 18.69 4.32 1.77 7.92 4.71 1.96 4.95 1.70 11.85 14.18 15.23 4.01 5.86 7.50 58 E13_Aa NovelBoundary 0 30.30 30.26 14.99 12.42 7.56 14.88 5.61 22.26 28.07 21.17 2.05 0.00 13.47 4.83 0.00 4.02 0.00 54.84 38.40 36.43 3.15 14.76 7.77 59 ER13a ExonRegion 0 5.48 21.06 0.00 0.00 7.44 45.81 24.75 0.00 2.58 0.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.27 0.00 0.00 0.00 0.00 0.00 60 E13_Da NovelBoundary 0 20.52 39.66 17.24 27.27 23.94 36.46 5.87 39.31 30.41 26.38 2.58 0.00 0.00 2.47 0.00 4.02 0.00 52.11 45.37 15.08 0.00 17.51 0.00 61 E13a_E14a KnownJunction 0 32.82 31.24 11.71 8.06 12.73 16.07 0.00 6.04 11.11 17.16 12.74 0.00 0.00 0.00 0.00 8.29 4.39 15.21 9.04 2.81 2.41 2.27 3.93 62 I13 Intron 0 13.81 18.19 7.94 12.76 14.88 23.05 12.48 18.05 20.02 14.87 2.34 0.86 3.73 6.42 4.04 6.47 4.79 25.33 24.64 17.49 6.92 9.06 11.36 63 I13_AR1 ActiveIntronRegion 0 13.93 18.36 8.02 12.88 15.02 23.25 12.60 18.23 20.21 15.01 2.36 0.87 3.77 6.48 4.08 6.53 4.82 25.57 24.87 17.64 6.98 9.15 11.47 64 E14_Aa NovelBoundary 0 13.19 6.12 14.13 16.41 11.97 12.44 8.30 20.00 28.01 30.57 2.00 0.00 0.00 9.06 0.00 0.00 12.44 17.95 17.60 16.87 8.46 13.59 12.89 65 ER14a ExonRegion 0 61.08 17.29 0.73 1.27 0.57 2.06 0.45 0.00 1.28 1.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.94 0.00 0.00 0.00 0.70 0.99 66 E14a_E15a KnownJunction 0 107.50 51.11 9.61 9.02 35.31 12.89 6.45 12.12 9.95 11.55 7.11 0.00 0.00 0.00 0.00 11.02 0.00 31.63 19.86 3.20 8.46 2.57 3.59 67 ER15a ExonRegion 0 130.71 113.95 15.35 40.53 34.99 123.65 67.86 15.84 17.08 20.65 1.57 4.96 9.82 7.68 6.38 10.90 2.92 31.59 24.87 10.90 1.86 18.10 17.87 68 E15a_E16a KnownJunction 0 167.88 189.77 148.10 270.40 118.42 224.87 92.96 120.68 129.34 161.49 29.06 7.05 27.60 44.91 38.45 62.55 37.59 113.91 185.13 77.92 17.92 113.71 135.04 69 ER16a ExonRegion 0 179.46 273.27 145.06 274.87 198.74 198.15 135.51 160.05 148.94 215.39 52.94 27.70 36.19 51.46 46.73 46.49 46.40 99.84 122.81 101.90 49.40 75.75 64.97