Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 COPS7A Gene 0 146.49 101.66 145.04 136.19 120.16 122.14 56.91 106.25 129.44 180.67 201.84 83.64 74.34 249.73 291.14 228.45 170.36 126.12 128.73 83.20 379.02 257.56 195.21 2 229251 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 455113 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 442593 Transcript 0 14.43 9.19 7.82 4.62 23.94 19.88 7.46 3.87 3.91 6.33 4.35 0.00 0.00 9.75 10.57 11.62 3.20 2.32 0.00 0.53 7.43 11.21 6.78 5 ER1a ExonRegion 0 12.06 2.03 0.25 1.09 2.68 5.13 2.65 0.86 2.22 1.72 4.83 0.00 0.00 7.63 12.48 13.37 1.65 1.29 9.56 0.85 8.81 17.08 10.87 6 ER1b ExonRegion 0 53.50 21.11 9.95 5.40 45.43 62.22 33.67 4.86 8.30 11.39 34.45 0.27 0.10 50.06 57.40 52.06 25.93 10.69 34.28 10.42 76.04 61.45 43.93 7 E1_Da NovelBoundary 0 131.43 28.74 9.34 4.99 70.63 154.85 58.91 2.22 12.90 5.83 35.32 0.00 0.00 33.08 141.42 63.40 42.92 18.20 44.33 9.27 111.69 95.03 107.64 8 E1a_E2a KnownJunction 0 19.86 11.77 14.10 5.83 31.83 32.42 14.93 2.55 7.81 6.63 4.84 0.00 0.00 12.60 4.45 15.81 3.93 4.64 0.00 0.00 11.00 16.17 11.35 9 E1b_E2a KnownJunction 0 48.68 26.97 13.60 4.96 38.12 68.43 50.43 9.61 19.01 14.88 49.91 0.00 0.00 35.08 61.81 35.97 26.09 11.23 17.79 9.01 94.70 45.93 68.80 10 ER1c ExonRegion 1 39.27 20.26 3.63 1.77 35.97 63.50 36.83 4.10 5.81 8.11 39.37 0.00 0.00 34.71 94.88 28.84 25.06 7.32 13.69 7.01 87.01 47.69 43.61 11 E2_Aa NovelBoundary 0 2.89 17.96 22.94 41.05 40.83 113.34 36.08 20.45 6.31 49.75 44.96 13.05 34.09 32.84 97.66 40.67 41.89 30.26 72.38 13.29 69.81 26.94 52.84 12 ER2a ExonRegion 0 30.29 21.61 119.60 100.10 46.52 64.17 20.00 81.45 104.94 142.71 192.77 38.20 34.41 202.44 199.71 207.53 158.38 133.13 145.39 74.65 345.56 196.41 182.75 13 E2a_E3a KnownJunction 1 35.04 33.94 139.26 77.21 120.12 130.44 50.35 76.32 103.82 147.45 162.04 19.96 48.37 242.57 166.51 257.80 135.20 119.22 104.57 73.31 355.10 172.43 151.52 14 E2a_E4a NovelJunction 0 21.71 2.96 30.48 18.81 7.13 28.90 4.20 15.94 18.40 22.64 8.95 12.60 0.00 4.89 16.69 24.35 4.68 30.22 9.13 16.87 11.61 37.35 18.69 15 E2a_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 I2_AR1 ActiveIntronRegion 0 8.12 2.51 7.39 18.05 31.31 18.07 7.58 3.36 2.75 9.79 7.57 3.70 5.80 9.57 12.08 15.46 4.47 12.36 6.60 4.60 11.46 8.05 12.79 17 I2_SR2 SilentIntronRegion 0 6.92 5.07 7.94 16.10 35.23 14.60 7.00 3.97 3.76 7.74 5.00 6.55 5.22 6.47 7.24 5.31 6.26 7.43 9.11 4.89 8.81 4.24 7.00 18 ER3a ExonRegion 1 46.67 54.53 141.14 99.26 152.13 182.25 93.69 92.15 133.28 200.80 266.18 32.58 60.48 222.93 207.33 220.52 166.83 163.89 118.36 73.99 406.06 200.32 146.75 19 E3a_E4a KnownJunction 0 111.43 83.80 176.49 123.86 237.52 285.80 168.66 127.53 164.52 256.61 311.24 82.53 107.46 263.70 313.62 361.44 227.12 204.53 185.79 95.04 526.65 320.68 242.94 20 ER4a ExonRegion 0 144.76 108.65 168.51 129.73 103.06 216.99 92.56 126.60 164.37 245.91 292.30 119.62 94.22 304.68 297.20 321.96 226.09 180.71 170.11 112.05 545.28 300.92 249.15 21 E4a_E5a KnownJunction 0 169.66 94.98 166.37 121.36 132.34 128.28 50.30 113.24 160.04 234.21 306.87 113.59 100.16 323.62 233.88 222.42 247.22 142.43 165.56 123.81 527.27 316.21 219.04 22 I4 Intron 0 25.06 10.43 8.57 13.63 25.69 14.50 12.06 9.27 11.04 15.20 16.45 11.68 15.74 18.26 16.74 24.97 11.88 11.07 12.68 7.66 16.10 14.66 13.29 23 I4_SR1 SilentIntronRegion 0 23.54 10.89 10.11 16.82 27.44 16.37 13.46 11.39 12.51 16.79 17.40 13.36 17.92 19.40 16.44 25.87 13.46 11.19 13.05 8.40 18.11 16.01 13.38 24 I4_AR2 ActiveIntronRegion 0 31.43 9.42 3.67 3.52 21.09 8.70 7.85 2.60 6.60 10.41 14.01 6.63 9.20 15.22 18.63 23.14 7.15 11.24 11.97 5.55 10.02 10.83 13.64 25 ER5a ExonRegion 0 127.36 62.12 153.81 102.83 60.98 96.47 29.88 102.10 136.58 194.21 264.04 80.85 55.19 256.29 289.21 226.37 189.72 98.77 122.67 85.95 463.32 218.02 146.73 26 E5_Ab KnownBoundary 0 187.14 57.62 189.61 135.41 28.18 60.36 28.66 124.95 144.27 214.09 219.53 61.82 86.52 225.15 294.09 231.31 225.43 145.75 189.37 102.59 455.92 233.05 154.25 27 ER5b ExonRegion 0 125.45 49.29 166.67 131.68 52.17 107.30 37.05 109.29 143.00 183.16 219.56 85.11 69.47 313.16 328.71 272.85 196.64 192.36 145.17 108.62 508.74 251.32 232.30 28 E5a_E6a KnownJunction 0 165.88 79.66 230.18 155.26 96.77 85.75 39.70 126.67 159.81 219.17 249.48 60.17 91.71 307.67 351.94 327.26 261.62 253.03 153.89 105.34 508.61 210.95 250.20 29 ER6a ExonRegion 0 124.65 92.83 178.38 137.34 106.73 133.28 58.53 138.57 149.55 194.81 239.75 53.34 70.97 286.95 363.64 255.07 204.94 193.58 114.55 93.01 486.38 213.93 254.27 30 E6a_E7a KnownJunction 0 189.89 111.43 175.75 153.66 232.09 297.78 111.69 174.36 181.74 210.89 292.39 78.03 97.72 424.81 404.72 319.32 256.47 204.03 174.97 101.50 619.57 302.25 288.78 31 ER7a ExonRegion 0 246.02 124.10 187.34 142.29 116.68 131.09 61.74 114.76 148.60 219.38 220.67 60.58 66.52 287.81 369.76 257.71 205.02 172.46 139.86 75.88 493.59 310.24 236.90 32 E7a_E8a KnownJunction 0 295.31 154.58 203.25 190.78 109.59 110.45 54.10 141.38 167.19 249.20 139.98 36.91 94.96 296.66 348.85 229.68 175.97 114.87 131.77 103.87 442.20 284.80 158.69 33 I7 Intron 0 24.80 6.31 8.81 4.90 13.83 8.85 10.49 4.44 8.88 11.19 21.98 17.46 2.66 31.74 20.05 32.77 23.89 4.43 9.88 5.87 15.19 20.10 16.19 34 I7_SR1 SilentIntronRegion 0 32.03 8.36 12.07 5.50 17.88 11.83 13.94 6.70 12.12 15.63 32.63 23.31 3.56 41.80 27.29 38.64 36.67 6.50 15.19 8.81 18.02 25.00 20.30 35 ER8a ExonRegion 0 189.26 145.78 155.67 172.74 167.19 133.00 67.31 122.21 142.57 198.37 199.51 116.64 99.40 270.38 329.14 239.90 175.48 111.42 135.81 91.38 357.15 306.42 206.94 36 ER8b ExonRegion 0 9.00 6.61 1.53 3.41 16.05 7.34 0.00 5.19 0.00 6.02 3.87 0.00 0.00 6.90 16.68 7.43 2.48 0.00 0.00 1.06 3.86 6.25 2.20 37 IG25_SR1 SilentIntergenicRegion 0 3.56 8.47 13.08 5.11 3.63 3.97 3.71 4.33 3.03 3.72 0.00 6.95 4.33 3.64 2.63 2.50 1.85 4.64 7.79 4.77 4.21 2.92 9.46 38 IG25_AR5 ActiveIntergenicRegion 0 11.29 1.36 9.60 0.00 4.46 0.00 2.65 9.79 2.26 1.15 0.00 17.32 0.00 0.00 0.00 2.97 0.00 0.92 0.00 0.00 0.00 0.00 8.32