Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 DUSP16 Gene 0 25.94 233.17 57.24 78.13 97.24 217.37 45.52 72.83 98.16 88.27 161.28 111.69 238.07 133.48 176.06 82.51 198.37 202.72 102.45 187.87 103.82 74.70 52.16 2 228862 Transcript 0 21.53 273.25 66.25 82.13 123.43 285.58 65.25 98.15 124.00 94.75 191.47 235.85 581.11 165.66 199.35 116.15 222.09 306.67 164.95 265.19 131.97 100.28 73.90 3 298573 Transcript 1 0.00 26.57 5.50 5.03 3.57 42.87 2.03 6.20 14.58 0.00 4.90 30.46 27.92 2.41 5.81 0.00 29.73 44.60 29.93 17.19 8.46 3.12 8.02 4 IG6_AR1 ActiveIntergenicRegion 0 0.00 0.00 0.00 0.00 0.83 3.26 0.41 0.80 0.94 0.27 7.87 7.03 7.75 4.43 5.44 7.72 13.83 4.74 19.47 3.12 4.07 0.65 1.71 5 ER1a ExonRegion 0 4.49 15.35 9.89 5.92 16.19 42.61 6.69 6.09 8.76 12.67 28.66 23.80 20.99 49.40 39.74 26.25 52.20 33.49 26.83 39.95 28.80 18.57 12.27 6 E1a_E2a KnownJunction 0 0.00 13.29 17.44 11.32 16.04 70.13 14.09 13.06 26.07 32.21 56.33 12.60 19.80 30.49 71.95 38.37 79.48 71.76 39.34 60.47 68.82 32.27 33.12 7 I1_SR2 SilentIntronRegion 0 0.00 4.66 5.21 4.52 5.39 4.90 8.40 6.85 3.75 1.18 16.27 16.99 3.56 8.43 8.96 18.32 19.26 13.33 7.22 11.77 1.90 3.35 20.26 8 I1_AR2 ActiveIntronRegion 0 3.81 1.48 4.38 5.15 5.16 6.87 9.91 4.09 5.45 1.02 26.02 18.45 13.88 12.36 17.22 9.72 31.07 5.38 4.60 4.19 3.04 4.65 16.17 9 ER2a ExonRegion 0 16.63 128.33 33.54 49.11 74.78 174.68 32.87 58.41 78.41 76.56 187.49 144.59 305.27 142.33 175.90 94.73 227.16 196.40 124.41 200.02 120.00 80.05 44.68 10 E2a_E3a KnownJunction 0 33.64 270.94 47.22 90.56 81.07 280.58 70.79 109.34 178.30 145.43 304.55 165.05 629.67 217.85 211.01 120.22 302.20 359.28 159.06 332.43 157.10 147.02 80.33 11 ER3a ExonRegion 0 17.47 188.46 52.10 82.96 58.67 255.45 45.63 84.12 147.13 106.74 251.78 211.96 510.44 166.42 197.20 109.05 316.84 311.91 142.45 286.13 149.49 123.30 73.25 12 E3a_E4a KnownJunction 1 14.15 232.79 74.63 89.57 103.40 220.55 42.66 109.09 146.76 96.17 191.36 290.94 565.22 214.55 255.89 128.86 269.28 358.32 209.51 252.79 137.52 122.71 90.31 13 E3a_E5a KnownJunction 1 0.00 26.57 5.50 5.03 3.57 42.87 2.03 6.20 14.58 0.00 4.90 30.46 27.92 2.41 5.81 0.00 29.73 44.60 29.93 17.19 8.46 3.12 8.02 14 I3_AR11 ActiveIntronRegion 0 4.02 2.90 0.00 4.41 25.26 1.35 5.24 7.78 0.85 0.30 1.17 11.91 0.83 0.57 4.78 0.00 3.59 2.72 3.14 6.04 0.65 1.44 5.53 15 I3_AR12 ActiveIntronRegion 0 6.29 10.93 2.45 7.47 22.34 3.63 4.50 4.55 2.99 2.66 1.09 1.93 7.69 0.18 7.09 0.63 3.74 2.08 3.38 6.92 1.56 1.48 1.25 16 ER4a ExonRegion 0 18.57 299.58 56.56 71.51 107.98 256.69 58.79 86.23 122.49 100.91 205.28 201.74 544.87 163.60 207.65 105.18 243.18 279.29 127.51 279.88 140.65 101.22 71.37 17 E4a_E5a KnownJunction 1 31.86 287.38 67.56 85.30 158.91 379.50 94.29 99.11 102.75 87.17 177.78 214.87 633.24 118.84 134.50 114.41 153.81 282.38 157.84 262.89 117.75 76.91 60.01 18 I4 Intron 0 10.44 13.93 5.75 16.62 24.65 10.36 10.01 13.21 11.87 10.08 3.81 9.09 14.15 1.82 5.10 2.69 5.74 6.86 6.41 11.13 2.81 5.27 3.92 19 I4_AR1 ActiveIntronRegion 0 38.08 25.82 24.26 51.61 75.34 33.67 20.16 42.00 21.49 28.45 6.53 13.26 13.42 2.18 9.50 5.53 8.80 12.60 12.08 18.47 3.23 12.07 3.87 20 I4_SR2 SilentIntronRegion 0 18.48 20.42 6.00 20.79 38.49 13.29 13.79 18.56 16.16 17.18 4.44 10.83 17.99 2.15 5.35 2.60 5.53 5.87 7.56 9.83 2.21 7.94 3.81 21 I4_AR2 ActiveIntronRegion 0 4.69 15.03 8.58 10.37 8.38 11.96 10.19 24.05 19.60 10.27 1.76 18.64 16.72 1.98 9.21 6.46 10.62 5.38 8.03 11.10 8.14 15.31 8.68 22 I4_SR3 SilentIntronRegion 0 13.39 19.71 7.41 26.68 30.64 14.70 14.51 18.66 23.03 15.70 9.05 16.17 21.07 3.60 7.01 4.64 8.40 19.52 15.12 20.10 6.54 8.68 7.50 23 I4_AR4 ActiveIntronRegion 0 12.02 19.35 6.76 22.81 31.46 11.63 15.92 17.36 19.45 14.00 3.06 15.14 25.94 2.21 10.94 0.79 3.05 4.74 5.89 15.18 2.91 10.46 6.98 24 E5_Aa NovelBoundary 0 9.78 28.09 11.15 20.31 66.89 29.81 24.51 31.96 14.99 9.70 2.00 32.86 40.58 5.12 4.45 0.00 4.30 21.60 22.78 23.59 0.00 5.82 0.00 25 ER5a ExonRegion 0 39.21 328.82 72.50 95.79 126.51 270.00 61.52 114.80 132.46 111.45 222.77 198.94 549.06 187.04 233.88 118.72 250.52 331.07 172.45 276.22 156.28 121.60 63.41 26 E5_Da NovelBoundary 0 42.01 32.95 5.82 29.30 56.37 16.30 30.07 25.38 28.70 9.64 2.21 17.56 22.40 3.00 13.35 8.20 4.58 17.95 22.78 17.19 5.68 5.69 3.59 27 E5a_E6a KnownJunction 1 17.78 307.45 59.05 91.66 111.71 217.60 45.13 108.81 120.86 118.25 167.62 162.05 514.25 106.78 115.33 78.10 193.27 188.70 96.10 177.11 117.32 55.78 32.01 28 I5 Intron 0 18.94 25.49 11.98 28.61 31.03 16.07 13.55 20.35 18.63 14.38 5.80 12.89 20.21 2.32 11.10 6.53 6.37 12.21 10.24 15.05 5.31 7.25 7.16 29 I5_AR1 ActiveIntronRegion 0 17.10 33.72 13.04 29.97 18.10 14.94 13.50 17.86 22.58 13.23 9.24 13.45 21.66 3.29 9.45 7.70 9.13 15.90 7.95 14.57 8.92 5.71 7.55 30 I5_SR2 SilentIntronRegion 0 10.71 12.51 14.21 20.00 30.17 20.34 12.75 14.65 12.37 9.90 3.81 12.26 25.69 0.20 13.12 2.24 6.55 14.84 4.90 15.06 5.70 5.32 10.62 31 I5_AR2 ActiveIntronRegion 0 6.39 17.85 6.55 24.68 23.17 12.34 8.88 14.71 13.78 13.38 4.33 6.08 18.03 2.96 13.63 6.42 3.42 14.75 6.27 15.86 6.47 3.72 7.98 32 I5_SR3 SilentIntronRegion 0 24.48 24.96 13.22 30.54 40.64 17.80 15.45 24.09 19.16 15.90 4.67 15.01 20.37 1.83 11.34 6.43 5.98 9.62 12.98 15.30 3.21 9.22 6.65 33 I5 Intron 0 26.76 23.61 29.72 55.54 56.38 61.79 37.35 30.89 33.65 33.66 17.11 28.77 31.75 13.88 17.15 9.84 14.33 29.72 26.96 26.90 9.80 24.64 13.54 34 I5_AR1 ActiveIntronRegion 0 29.63 23.39 31.84 58.64 59.76 66.48 39.97 34.46 36.35 36.21 17.90 29.28 32.19 13.82 18.62 9.47 15.06 32.05 28.67 28.19 10.05 26.17 13.40 35 I5_AR2 ActiveIntronRegion 0 7.96 25.50 16.02 35.65 34.68 31.43 20.48 7.54 16.16 17.17 12.12 25.83 29.29 14.54 7.56 12.42 9.66 14.60 15.98 18.68 8.29 14.79 14.73 36 E6_Aa NovelBoundary 0 24.15 17.83 19.04 51.31 43.72 47.87 42.71 28.83 50.35 50.26 14.85 12.00 7.63 10.95 10.01 4.36 18.79 34.86 21.27 21.28 20.57 14.27 16.05 37 ER6a ExonRegion 0 32.99 293.29 75.44 111.20 125.37 322.30 68.94 113.10 134.80 116.09 183.17 167.77 463.29 181.01 204.44 126.91 279.72 268.65 148.32 237.92 119.02 115.05 73.44 38 E6_Da NovelBoundary 0 15.11 43.48 31.19 58.63 45.50 115.62 52.82 21.85 36.81 43.84 18.16 35.71 20.13 5.06 4.45 15.21 7.11 27.36 35.77 21.48 19.65 19.47 15.88 39 E6a_E7a KnownJunction 0 23.93 272.91 78.56 96.39 97.03 334.69 50.35 107.33 123.64 120.99 197.47 208.27 337.15 198.72 176.53 126.21 274.24 211.08 138.26 237.20 87.35 136.61 82.03 40 I6 Intron 0 11.61 16.48 12.74 31.25 31.88 36.04 27.87 18.52 19.29 19.84 10.48 25.29 17.79 10.34 6.78 8.42 10.46 18.17 16.69 19.77 8.46 14.73 10.56 41 I6_SR1 SilentIntronRegion 0 13.76 18.68 20.68 49.63 49.03 46.19 40.62 30.69 29.33 25.65 13.06 31.58 22.48 8.08 11.73 6.85 12.76 18.53 13.15 25.22 7.66 18.62 14.09 42 I6_AR1 ActiveIntronRegion 0 12.32 18.68 11.78 32.43 33.88 38.52 26.91 21.21 20.37 18.66 9.67 29.69 18.75 11.85 6.04 11.21 11.49 18.85 16.14 18.81 7.44 13.24 11.05 43 I6_SR2 SilentIntronRegion 0 9.56 12.43 9.86 19.96 20.14 27.44 22.51 8.44 12.55 18.46 10.26 16.10 14.09 9.59 5.17 5.53 7.89 17.17 19.47 18.28 10.34 14.76 8.06 44 E7_Aa NovelBoundary 0 6.52 6.45 4.67 21.01 7.56 17.66 38.38 9.49 16.90 20.47 7.48 0.00 19.32 7.89 4.57 0.00 13.46 24.08 9.22 17.45 14.33 17.82 16.99 45 ER7a ExonRegion 0 30.96 277.00 68.01 92.28 111.58 235.69 50.34 77.97 105.13 95.50 155.38 90.14 168.35 130.28 183.42 77.35 188.80 199.18 93.31 179.94 98.05 69.14 54.32 46 IG5 Intergenic 0 34.82 136.36 44.68 63.13 80.85 113.29 42.20 38.64 43.10 42.14 35.98 46.56 55.67 37.14 70.53 23.96 43.73 59.76 41.59 74.03 31.41 28.30 23.71 47 IG5_AR8 ActiveIntergenicRegion 0 61.74 264.78 81.52 102.47 140.08 185.59 57.63 65.14 67.76 64.78 59.89 67.08 89.01 59.75 135.76 39.38 74.94 94.45 58.61 128.17 45.67 42.95 34.15 48 IG5_AR7 ActiveIntergenicRegion 0 12.80 21.95 9.89 31.89 27.65 44.85 33.29 17.47 22.39 23.57 13.78 34.35 32.48 15.88 9.45 10.24 17.77 28.55 26.79 24.98 16.94 15.37 14.07 49 IG5_SR4 SilentIntergenicRegion 0 15.17 25.70 4.56 15.42 27.31 85.04 29.24 18.01 14.79 18.83 9.34 20.81 13.96 16.16 4.44 11.32 17.42 27.00 27.56 9.64 24.40 12.80 19.88 50 IG5_AR6 ActiveIntergenicRegion 0 2.96 7.12 1.72 5.59 2.68 9.72 2.12 6.91 6.42 2.29 4.06 12.56 0.00 4.87 4.93 5.05 4.29 10.72 3.50 3.62 9.48 3.13 7.64 51 IG5_AR4 ActiveIntergenicRegion 0 7.08 12.70 10.02 26.77 25.07 29.06 26.30 13.80 20.72 18.78 12.51 30.04 27.43 11.37 10.79 5.40 12.04 13.05 16.75 22.77 9.13 16.21 7.65 52 IG5_AR3 ActiveIntergenicRegion 0 3.48 9.37 5.08 17.18 19.21 56.72 41.61 3.64 8.16 6.19 7.52 12.83 6.70 9.69 19.07 0.00 16.27 7.33 9.10 12.46 9.68 17.11 9.54 53 IG5_SR2 SilentIntergenicRegion 0 1.06 3.20 5.69 4.87 3.82 15.72 12.86 0.99 1.68 4.83 2.49 9.59 0.00 3.60 0.00 0.00 9.90 2.64 2.73 3.34 4.88 8.63 3.36 54 IG5_AR2 ActiveIntergenicRegion 0 9.31 25.02 14.85 29.91 30.30 60.43 32.60 15.79 21.11 19.67 15.04 22.87 19.17 18.76 13.62 13.31 14.95 33.32 32.38 26.65 23.22 17.25 18.96 55 IG5_SR1 SilentIntergenicRegion 0 13.54 18.37 15.37 30.42 28.88 58.64 22.73 13.28 24.87 25.44 21.76 23.41 15.12 30.07 13.49 13.84 21.61 49.80 37.19 30.49 29.63 13.37 20.23 56 IG5_AR1 ActiveIntergenicRegion 0 11.10 22.02 11.25 21.50 28.30 52.03 20.84 11.51 19.78 27.74 15.60 30.19 33.77 16.55 14.25 10.37 13.64 33.45 26.17 29.78 22.34 13.21 14.07