Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PARP11 Gene 0 29.82 37.42 15.52 31.98 36.48 12.38 20.51 17.43 17.26 14.39 22.85 33.23 32.08 35.37 23.64 38.03 21.70 14.13 15.14 20.19 12.75 29.74 18.91 2 427057 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 397096 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 416739 Transcript 0 4.85 2.76 1.54 6.98 4.29 0.83 3.03 1.29 1.63 1.42 1.59 1.21 2.61 3.65 1.62 4.53 1.55 1.03 2.27 3.70 0.79 0.99 2.37 5 228820 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 447133 Transcript 1 6.67 12.10 6.45 11.35 15.11 5.79 7.07 9.82 9.46 9.21 21.90 62.87 0.00 53.21 10.14 41.70 13.65 23.63 0.00 19.75 15.01 8.27 35.25 7 450737 Transcript 0 1.44 7.20 0.00 0.93 1.91 2.61 3.67 1.23 3.91 2.08 0.00 0.00 0.00 0.00 0.00 12.82 5.98 5.64 4.05 0.00 3.00 2.94 8.75 8 453942 Transcript 0 0.00 3.32 0.00 0.00 3.05 0.00 1.00 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 2.24 0.00 1.20 0.11 0.35 0.00 9 476985 Transcript 0 6.45 0.00 0.00 3.93 0.00 5.34 0.00 0.00 2.46 1.58 0.00 0.00 13.64 4.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 IG34_AR4 ActiveIntergenicRegion 0 17.90 0.00 0.00 1.47 9.97 0.44 2.55 0.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER1b ExonRegion 0 4.44 2.72 0.00 0.62 3.32 0.62 2.88 0.00 0.40 0.06 5.42 0.00 0.00 9.67 8.33 13.57 3.89 2.29 2.52 1.37 2.35 0.47 1.71 13 E1_Ac KnownBoundary 0 3.70 2.89 0.00 0.00 0.00 0.00 1.85 0.00 0.00 0.00 2.58 0.00 0.00 7.06 0.00 7.09 8.42 0.00 0.00 2.56 2.72 0.00 0.00 14 E1_Ad KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 E1_Ae KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.00 0.00 0.00 0.00 0.00 13.07 0.00 0.00 0.00 0.00 3.09 0.00 4.35 16 E1_Af KnownBoundary 1 30.23 44.47 0.00 7.19 37.86 27.03 55.47 3.94 8.85 5.00 39.59 0.00 12.99 137.85 17.80 112.71 40.39 49.99 57.23 19.24 50.53 46.90 77.60 17 ER1c ExonRegion 0 15.34 6.61 0.00 1.36 13.38 5.50 5.30 0.00 3.71 1.15 26.09 0.00 0.00 41.42 18.86 47.55 16.50 12.93 19.11 2.13 8.81 4.17 11.75 18 ER1d ExonRegion 0 16.93 8.13 0.00 1.36 13.38 5.50 5.30 0.00 3.71 2.29 27.06 0.00 0.00 43.85 20.31 47.55 16.50 14.78 19.11 2.13 8.81 6.25 14.68 19 ER1e ExonRegion 1 27.40 21.30 0.00 5.38 24.65 13.99 29.20 3.46 4.81 5.31 36.11 1.14 6.17 101.21 27.03 85.72 30.40 32.97 39.40 11.09 31.20 29.61 44.05 20 ER1f ExonRegion 1 26.58 39.58 0.00 7.08 26.35 22.99 38.04 5.19 7.20 9.79 23.98 5.41 5.32 80.08 11.27 82.82 44.75 39.12 27.38 22.79 39.84 42.03 48.74 21 E1_Da KnownBoundary 0 6.30 19.14 0.00 1.93 4.24 18.34 6.14 2.14 3.44 5.26 2.37 0.00 0.00 2.18 0.00 15.64 21.79 13.31 4.71 15.92 11.00 5.69 19.63 22 E1a_E1g KnownJunction 0 2.89 14.41 0.00 1.86 3.82 5.22 7.33 2.46 7.81 4.16 0.00 0.00 0.00 0.00 0.00 25.63 11.97 11.28 8.09 0.00 5.99 5.88 17.50 23 E1_Ag KnownBoundary 0 2.89 2.57 0.00 0.00 0.00 0.00 4.24 0.00 1.62 0.00 0.00 0.00 0.00 0.00 0.00 14.18 3.93 6.05 0.00 0.00 0.00 0.00 10.33 24 ER1g ExonRegion 0 4.23 22.37 0.00 6.81 8.03 11.61 10.59 5.19 4.94 9.18 5.80 4.33 0.00 19.49 2.90 33.68 29.71 29.56 6.37 13.48 13.22 12.50 36.22 25 ER1h ExonRegion 0 2.58 5.81 0.72 2.71 2.58 3.67 3.24 0.73 3.60 5.46 12.60 1.77 6.55 13.60 3.01 25.17 16.62 10.06 7.87 12.00 10.06 4.67 15.07 26 E1b_E2a KnownJunction 0 0.00 0.00 3.05 1.83 3.40 0.00 0.00 1.56 7.52 8.68 28.90 6.30 0.00 16.54 4.45 29.82 9.54 9.66 34.45 17.83 23.41 8.45 3.93 27 E1c_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 ER1i ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.55 0.00 0.00 29 ER2a ExonRegion 1 3.18 24.21 13.40 19.36 23.92 11.23 17.45 13.73 12.99 12.67 34.15 49.57 24.14 85.57 24.65 84.28 25.74 44.06 33.06 29.34 30.44 38.76 37.02 30 E2a_E4a KnownJunction 1 3.78 10.66 22.23 17.75 38.79 5.05 29.46 14.54 11.57 15.15 7.42 30.61 38.80 52.86 13.35 79.47 12.06 13.27 11.48 16.17 11.86 14.63 19.12 31 E2a_E5a KnownJunction 1 6.67 12.10 6.45 11.35 15.11 5.79 7.07 9.82 9.46 9.21 21.90 62.87 0.00 53.21 10.14 41.70 13.65 23.63 0.00 19.75 15.01 8.27 35.25 32 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 ER4a ExonRegion 0 8.62 19.56 16.43 17.13 20.39 9.53 14.48 13.96 10.48 14.78 15.72 30.31 16.43 29.70 14.36 43.67 15.60 12.64 9.06 12.80 11.67 13.43 12.06 34 E4a_E5a KnownJunction 0 31.04 25.52 21.26 26.47 15.20 26.41 3.84 21.60 10.30 18.35 24.59 13.05 20.13 31.43 14.83 42.81 18.14 18.57 0.00 8.88 11.00 13.53 7.17 35 ER5a ExonRegion 0 25.23 50.22 15.87 22.34 46.19 34.70 39.56 26.13 20.20 18.38 57.66 87.61 37.03 85.03 37.03 111.73 49.51 28.79 24.23 31.58 30.71 35.78 37.64 36 E5_Da NovelBoundary 0 14.67 0.00 0.00 1.63 8.66 0.00 2.25 2.09 0.00 0.00 2.16 6.30 5.84 2.47 0.00 0.00 4.30 2.07 0.00 3.13 0.00 0.00 0.00 37 E5a_E6a KnownJunction 0 30.60 76.24 16.23 21.88 36.25 24.36 35.55 25.30 10.45 19.80 45.96 79.23 35.39 87.94 38.82 97.67 42.92 21.43 31.62 23.71 9.02 41.82 22.28 38 ER6a ExonRegion 1 27.98 45.46 16.06 26.27 37.72 15.50 17.34 22.66 18.87 12.74 46.89 59.78 49.98 85.30 24.24 96.33 33.60 25.79 28.28 18.60 15.64 35.73 34.35 39 E6a_E7a KnownJunction 0 38.97 26.97 18.04 28.70 59.17 5.22 34.05 10.43 23.03 14.69 53.17 43.81 49.19 83.70 28.43 88.18 53.67 15.38 22.49 24.54 14.76 58.85 12.80 40 E7_Ab NovelBoundary 0 48.23 54.07 16.06 30.80 64.52 11.24 23.98 14.05 25.55 10.66 48.59 55.07 48.86 74.99 24.60 57.34 52.36 12.81 0.00 39.76 17.48 46.11 24.93 41 ER7a ExonRegion 0 37.96 32.61 15.19 26.35 53.34 8.92 24.10 14.35 23.06 12.54 51.99 58.74 53.00 65.45 22.34 71.33 52.70 16.32 10.30 32.48 15.13 49.87 22.51 42 ER7b ExonRegion 1 32.65 42.81 19.64 25.37 45.38 17.68 15.10 22.42 30.08 13.63 52.97 91.05 45.18 87.62 21.95 71.15 50.76 20.11 5.74 29.93 13.83 36.93 26.37 43 E7a_E8a KnownJunction 0 0.00 6.71 0.00 0.00 8.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.94 0.00 2.81 0.00 0.00 0.00 44 E7a_E9a KnownJunction 0 23.41 21.05 27.38 18.45 31.07 13.06 20.62 23.91 15.74 12.22 49.38 112.69 34.25 55.98 6.30 64.68 35.25 20.93 16.57 26.27 5.13 32.64 20.49 45 ER8a ExonRegion 0 0.00 3.21 0.00 0.00 7.12 0.00 3.25 0.00 0.00 0.00 0.07 0.00 0.00 0.00 0.00 0.00 0.00 5.42 0.00 3.21 0.00 1.73 0.00 46 E8a_E9a KnownJunction 0 0.00 6.71 0.00 0.00 0.00 0.00 1.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.87 0.00 0.00 0.00 0.00 0.00 47 E9_Aa NovelBoundary 0 3.56 9.34 1.45 20.51 0.00 7.61 10.78 0.00 6.51 3.33 6.58 0.00 0.00 0.00 0.00 0.00 0.00 1.70 0.00 5.75 5.50 3.12 0.00 48 ER9a ExonRegion 0 31.07 44.69 21.36 26.28 53.53 22.52 26.31 19.59 27.49 14.44 59.02 79.50 43.97 61.00 27.28 70.69 48.82 20.18 21.77 33.94 18.76 48.63 22.51 49 E9a_E10a KnownJunction 0 67.57 67.36 19.57 32.80 42.78 21.75 29.19 19.80 21.93 18.13 75.12 105.93 46.43 62.10 38.32 67.08 37.68 28.52 23.72 24.61 43.37 40.84 47.80 50 E9a_E10b KnownJunction 0 6.45 0.00 0.00 3.93 0.00 5.34 0.00 0.00 2.46 1.58 0.00 0.00 13.64 4.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51 E9a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 1.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 52 ER10a ExonRegion 0 28.37 36.50 20.20 26.35 39.03 18.86 26.49 20.88 33.48 20.95 52.62 92.64 51.55 60.84 26.07 72.98 36.74 20.89 28.77 37.46 39.60 48.54 33.61 53 E10_Da KnownBoundary 0 34.08 46.50 13.07 26.40 37.10 29.93 26.32 12.82 31.89 16.41 55.80 144.95 59.90 77.23 28.06 71.09 16.74 9.91 26.92 34.20 22.61 67.60 36.71 54 ER10b ExonRegion 1 27.64 44.94 14.21 28.05 45.49 25.34 21.02 16.90 22.65 24.45 39.08 99.49 39.58 58.08 31.57 60.33 34.13 13.56 16.05 33.36 28.56 41.46 37.24 55 E10_Ab KnownBoundary 0 24.45 69.20 14.75 25.27 53.65 20.67 33.43 20.29 15.68 24.69 36.17 68.87 40.91 70.99 30.41 56.14 45.82 15.34 9.13 40.46 15.01 33.98 47.80 56 ER10c ExonRegion 1 29.86 42.11 14.04 40.92 47.84 15.39 32.75 24.85 27.28 20.13 24.92 70.01 76.90 45.04 19.06 41.80 25.20 12.70 11.79 27.59 7.67 44.76 27.10 57 E10_Db KnownBoundary 0 59.49 51.04 18.42 66.13 40.92 8.92 39.08 37.71 35.56 37.02 32.17 74.87 59.90 44.15 27.44 50.67 41.70 14.38 4.80 41.80 11.68 54.56 32.86 58 ER10d ExonRegion 0 43.44 56.85 22.36 44.42 50.05 15.96 26.38 25.55 22.98 20.20 25.86 33.50 41.28 39.54 35.87 40.25 26.38 17.33 19.18 23.67 14.19 41.07 22.40 59 ER11a ExonRegion 0 4.13 8.95 0.00 4.70 1.61 0.00 1.92 0.09 1.24 2.06 0.87 0.00 0.00 8.61 0.00 6.39 0.99 0.00 0.00 2.55 0.77 0.00 2.79 60 ER11b ExonRegion 0 7.76 5.95 1.86 11.66 4.04 0.95 3.85 4.01 2.65 3.33 2.93 1.72 5.03 8.05 2.74 8.81 5.05 2.39 5.80 6.93 1.64 1.63 6.59 61 E11_Db NovelBoundary 0 7.26 6.51 3.73 8.19 3.90 0.00 5.39 8.63 7.58 5.56 2.21 0.00 6.01 3.00 14.09 11.79 8.13 2.57 4.80 9.27 5.75 0.00 8.45 62 E11b_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 63 ER12a ExonRegion 0 1.27 2.32 0.56 1.75 2.27 0.53 3.03 0.00 1.40 1.00 2.22 2.04 3.32 4.86 0.72 3.22 0.00 0.00 0.91 3.67 0.00 1.80 1.68 64 E12a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 65 E13_Aa NovelBoundary 0 21.26 5.92 1.77 23.04 12.39 0.00 6.14 4.89 2.86 3.63 2.42 0.00 0.00 2.47 0.00 4.27 4.02 2.57 0.00 8.44 0.00 6.25 0.00 66 ER13a ExonRegion 0 15.23 5.52 5.29 21.51 15.14 2.66 8.27 2.45 2.29 2.78 2.80 2.29 4.69 5.32 4.63 10.63 2.69 2.74 4.61 7.90 2.29 1.51 3.59