Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PRR4 Gene 0 28.86 29.17 18.59 72.83 50.70 31.82 22.15 15.96 41.89 39.50 30.29 16.85 15.95 10.24 16.53 24.21 17.83 27.00 31.32 30.90 31.60 32.28 21.84 2 431566 Transcript 0 0.09 1.19 0.31 0.62 1.34 0.31 0.33 0.22 0.36 0.29 0.89 0.00 0.00 0.20 0.00 0.00 0.00 0.00 0.27 0.89 0.55 0.52 0.00 3 228811 Transcript 0 30.88 25.63 25.22 82.74 52.49 20.70 24.36 19.53 49.62 43.77 42.74 8.58 13.87 15.43 18.65 32.15 25.43 38.44 35.57 37.12 29.52 33.13 23.66 4 IG38_AR2 ActiveIntergenicRegion 0 8.50 9.53 7.00 28.94 17.48 19.09 12.46 6.71 15.03 16.62 10.23 10.89 14.95 6.48 3.57 11.58 9.86 14.71 10.79 16.97 20.37 20.13 11.43 5 IG38_SR1 SilentIntergenicRegion 0 7.30 9.23 5.71 29.08 23.98 18.55 13.36 5.50 13.00 14.90 5.91 15.58 12.02 3.59 1.84 6.31 5.94 4.56 3.12 10.60 4.76 16.55 5.53 6 IG38_AR1 ActiveIntergenicRegion 0 9.24 14.43 8.17 33.31 24.65 22.76 13.41 10.25 14.31 15.60 7.78 8.01 4.49 7.10 2.47 6.41 15.05 9.51 10.02 12.06 9.32 13.42 9.87 7 ER1a ExonRegion 1 3.14 5.89 1.89 5.18 12.97 6.13 5.16 0.00 7.54 6.01 4.88 3.46 1.88 1.31 1.41 1.36 14.43 5.09 4.98 4.26 9.80 2.02 8.53 8 E1_Da NovelBoundary 0 16.37 24.34 12.98 18.68 22.84 22.43 7.29 6.98 11.28 13.89 2.05 0.00 6.82 11.65 0.00 11.02 13.00 4.23 8.00 5.11 8.90 22.96 8.54 9 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 I1 Intron 0 29.96 19.78 6.79 51.71 26.03 19.72 16.33 13.85 17.17 20.81 9.02 17.26 7.66 4.87 5.63 11.05 9.66 12.86 10.07 10.43 10.27 20.43 9.98 11 I1_AR1 ActiveIntronRegion 0 29.99 19.81 6.80 51.79 26.07 19.75 16.36 13.87 17.20 20.84 9.03 17.28 7.67 4.88 5.64 11.06 9.67 12.88 10.09 10.45 10.29 20.46 10.00 12 E2_Aa NovelBoundary 0 31.93 6.12 10.29 29.33 35.31 26.92 24.82 8.63 16.70 26.14 17.00 38.11 0.00 7.24 4.45 27.09 8.70 12.44 4.14 3.07 14.89 24.86 46.01 13 ER2a ExonRegion 1 17.11 14.24 17.43 44.07 35.60 13.19 12.21 7.35 30.98 26.92 39.95 0.72 3.91 16.11 14.91 26.50 17.24 28.49 27.69 27.84 26.87 20.55 16.97 14 E2_Da NovelBoundary 0 3.70 0.00 0.00 12.32 16.55 23.34 12.90 5.09 2.86 4.43 7.48 6.30 0.00 0.00 0.00 3.93 8.04 0.00 3.67 0.00 2.78 2.57 0.00 15 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 E2a_E4a KnownJunction 1 47.56 48.61 52.13 160.82 82.43 30.78 37.14 48.18 100.09 88.64 77.81 0.00 12.99 37.20 38.57 58.53 58.34 71.22 70.40 64.94 59.12 58.11 40.46 17 ER3a ExonRegion 0 0.26 0.51 0.92 0.51 0.00 0.92 0.00 0.65 0.46 0.86 0.72 0.00 0.00 0.61 0.00 0.00 0.00 0.00 0.80 0.53 0.00 1.56 0.00 18 E4_Aa NovelBoundary 0 6.15 13.16 19.43 29.13 7.13 7.89 10.20 4.97 11.31 9.56 6.90 7.65 0.00 4.94 0.00 3.16 4.77 18.53 7.72 2.94 14.89 2.51 4.35 19 ER4a ExonRegion 0 58.61 43.44 30.63 105.34 85.07 29.53 37.16 25.63 67.36 67.25 66.85 25.23 32.51 21.23 30.81 52.58 35.80 66.55 63.76 59.72 54.29 62.58 45.97 20 E4_Ab KnownBoundary 0 68.16 40.58 32.67 121.26 83.62 29.64 38.20 25.14 70.75 70.08 37.38 31.21 28.41 17.42 41.29 52.72 33.47 58.32 61.55 37.52 70.80 49.11 44.73 21 ER4b ExonRegion 0 41.20 45.61 25.36 108.20 69.75 54.69 30.47 27.19 63.46 59.71 39.29 26.21 22.51 13.62 24.63 33.44 21.59 34.15 45.29 41.78 48.39 49.49 30.24 22 E4_Da NovelBoundary 0 14.22 6.31 6.74 28.53 16.04 0.00 4.33 10.10 7.06 18.29 2.32 0.00 0.00 0.00 0.00 0.00 0.00 4.77 16.00 2.49 10.93 2.45 0.00 23 E4a_E5a KnownJunction 0 3.78 0.00 4.35 14.52 11.21 12.49 7.68 1.97 16.15 5.00 14.37 0.00 0.00 0.00 0.00 8.12 4.21 5.14 0.00 5.82 2.41 2.94 4.27 24 E4_Db NovelBoundary 0 20.30 9.41 2.78 13.05 7.81 0.00 6.76 0.00 2.81 4.41 7.05 0.00 0.00 0.00 0.00 3.93 13.28 8.37 4.71 3.26 8.34 5.88 0.00 25 ER4c ExonRegion 0 0.00 3.05 0.00 1.36 4.01 0.00 0.99 0.00 0.62 0.00 1.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.13 1.65 0.00 0.00 26 I4 Intron 0 11.74 17.83 15.07 49.63 35.36 22.23 20.32 8.14 13.17 22.59 5.36 7.11 10.81 3.26 6.11 6.90 5.53 6.16 11.50 10.56 7.38 18.54 7.19 27 I4_AR1 ActiveIntronRegion 0 11.77 17.88 15.11 49.75 35.45 22.28 20.37 8.16 13.20 22.65 5.37 7.13 10.84 3.27 6.12 6.92 5.55 6.18 11.53 10.59 7.40 18.59 7.21 28 E5_Aa NovelBoundary 0 2.96 10.85 3.05 25.20 11.29 5.85 14.62 4.44 7.29 21.03 2.00 13.95 12.66 0.00 4.45 3.76 0.00 1.74 0.00 12.21 3.03 3.00 4.18 29 ER5a ExonRegion 0 13.59 10.45 13.79 50.26 31.25 9.99 15.45 2.33 14.90 14.20 11.95 9.09 9.99 3.31 5.22 9.36 3.37 10.85 8.12 18.00 2.25 8.88 3.94 30 IG37 Intergenic 0 4.40 9.90 2.37 17.12 10.27 4.40 7.93 1.93 5.13 5.59 1.55 5.29 6.43 1.28 1.21 1.84 1.58 1.66 4.47 9.14 1.27 2.40 1.66 31 IG37_SR2 SilentIntergenicRegion 0 4.57 10.49 2.52 17.73 10.39 4.06 8.15 1.83 4.81 5.48 1.49 5.23 6.05 1.24 1.28 1.88 1.52 1.65 4.79 9.02 1.25 2.01 1.63 32 IG37_SR1 SilentIntergenicRegion 0 3.41 7.36 1.30 14.29 9.73 13.62 7.88 3.76 12.00 7.51 3.82 5.66 17.78 1.73 0.84 1.17 3.03 1.39 1.39 15.43 1.03 5.80 3.91