Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NECAP1 Gene 0 130.40 251.51 108.87 216.50 200.71 183.83 148.53 219.05 277.16 196.55 89.62 91.68 86.23 96.03 103.35 95.70 80.67 122.57 86.36 166.27 83.92 117.44 85.28 2 339754 Transcript 0 62.98 184.31 73.98 145.52 119.14 189.23 117.40 207.38 305.72 225.05 91.57 110.57 101.47 121.17 87.56 131.04 98.32 243.11 105.48 227.38 138.31 133.63 120.31 3 450991 Transcript 0 0.00 0.00 0.00 0.00 3.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 ER1a ExonRegion 0 74.65 98.23 17.71 35.49 76.36 105.61 85.51 61.84 83.74 73.24 25.78 2.80 4.31 31.80 23.21 73.03 31.96 144.33 55.55 79.58 66.79 44.93 93.50 5 E1a_E2a KnownJunction 1 6.22 21.77 19.22 28.80 30.73 4.54 0.00 28.75 67.68 52.60 2.00 18.46 26.95 12.18 6.18 13.59 8.79 22.26 8.28 26.65 5.87 2.39 0.00 6 ER2a ExonRegion 1 9.81 41.92 24.18 47.82 21.94 5.30 10.45 91.11 134.00 123.45 47.65 27.78 19.32 48.71 16.37 41.82 56.83 52.47 45.60 122.43 102.77 56.38 29.45 7 E2a_E3a KnownJunction 1 31.86 95.90 50.86 115.60 46.35 22.37 24.11 152.26 237.21 187.31 98.50 44.56 13.64 167.82 78.99 183.71 67.98 230.40 220.05 271.71 101.62 210.15 155.79 8 ER3a ExonRegion 0 24.55 103.77 45.61 76.53 74.05 116.49 67.84 126.61 200.88 141.05 56.16 58.22 50.25 89.51 60.24 129.27 60.74 185.51 95.62 170.56 90.31 106.08 135.78 9 E3a_E4a KnownJunction 1 6.96 83.47 34.42 79.91 171.31 363.48 194.32 118.33 196.53 137.72 44.43 57.02 48.37 65.98 9.64 63.23 36.37 87.05 44.80 156.85 92.48 54.74 42.25 10 E3a_E5a NovelJunction 0 0.00 3.09 3.02 5.69 8.32 0.00 0.00 4.27 8.94 2.82 2.42 18.61 0.00 0.00 4.45 15.38 12.72 17.29 0.00 0.00 0.00 4.90 0.00 11 I3 Intron 0 13.08 11.94 9.59 13.81 20.95 6.61 19.23 10.88 16.50 11.27 12.94 22.26 22.34 20.26 11.13 17.77 15.98 7.19 5.58 12.71 8.85 17.17 13.01 12 I3_AR1 ActiveIntronRegion 0 14.22 10.85 12.99 17.26 24.86 10.15 23.03 15.27 21.46 14.19 16.05 24.99 24.47 27.50 12.01 19.39 18.92 8.16 8.19 15.98 9.14 21.00 16.25 13 I3_SR1 SilentIntronRegion 0 12.36 13.62 6.15 10.49 17.43 2.88 15.77 6.37 11.58 8.45 9.99 20.14 20.89 12.87 10.62 16.72 13.35 6.41 2.86 9.56 8.90 13.57 9.90 14 E4_Aa NovelBoundary 0 13.11 9.08 17.77 25.94 32.34 26.80 12.06 23.74 19.62 23.10 22.22 30.91 19.80 48.91 26.70 32.90 43.85 54.84 9.13 21.22 29.34 37.29 40.21 15 ER4a ExonRegion 0 17.15 121.00 58.72 80.48 164.00 351.32 202.71 106.57 198.69 155.62 73.14 77.70 65.17 94.37 42.98 74.22 64.11 129.97 61.70 178.83 129.61 74.24 48.61 16 E4_Da KnownBoundary 1 33.64 192.66 95.27 109.38 166.30 347.30 269.26 120.76 237.70 191.45 99.18 112.99 73.05 128.73 53.77 81.77 89.48 172.49 84.61 197.25 160.44 102.44 48.23 17 E4a_E7b KnownJunction 0 0.00 0.00 0.00 0.00 3.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER4b ExonRegion 0 37.76 231.13 78.01 127.37 114.33 280.90 184.12 157.41 250.00 186.84 78.50 114.44 98.70 100.81 58.09 122.87 97.30 247.51 90.28 227.90 145.80 116.82 84.16 19 E4_Db NovelBoundary 0 22.97 48.68 23.51 38.89 44.57 16.30 28.71 23.95 37.70 25.73 25.85 25.36 48.54 41.26 14.34 46.40 18.89 24.62 17.04 29.98 40.71 34.41 27.32 20 E4b_E5a KnownJunction 1 42.75 211.41 74.89 166.51 111.80 251.50 121.18 215.31 291.37 201.17 60.28 99.78 126.78 84.70 56.74 123.39 71.25 305.68 102.97 270.63 93.59 176.60 132.31 21 I4 Intron 0 31.89 32.41 18.52 37.37 30.63 19.13 24.36 32.10 33.34 26.00 26.04 30.33 19.39 29.66 14.64 36.60 19.13 38.20 15.23 26.51 22.03 36.22 21.70 22 I4_AR1 ActiveIntronRegion 0 32.07 32.60 18.63 37.58 30.80 19.24 24.50 32.28 33.54 26.15 26.19 30.50 19.50 29.83 14.72 36.81 19.23 38.42 15.32 26.66 22.16 36.43 21.82 23 E5_Aa NovelBoundary 0 55.19 64.26 31.28 54.54 78.10 26.29 67.35 56.64 30.18 36.69 38.54 62.27 67.20 32.26 34.49 22.56 43.85 11.03 12.24 17.58 25.76 44.52 25.01 24 ER5a ExonRegion 0 40.00 169.96 86.60 173.17 129.22 127.47 74.31 256.33 377.68 273.46 131.31 119.32 110.75 148.90 101.09 164.45 105.69 262.45 123.03 291.47 160.67 190.86 132.34 25 E5_Da NovelBoundary 0 13.11 36.44 30.22 46.68 47.45 19.70 19.78 42.14 31.83 36.56 27.90 31.36 48.86 32.79 34.24 75.96 35.53 61.93 23.06 7.67 51.95 76.17 40.12 26 E5a_E6a KnownJunction 0 27.86 136.62 76.93 150.36 116.72 86.09 52.95 203.65 298.23 230.61 99.92 130.54 62.17 109.72 74.17 140.31 98.18 203.49 97.23 228.63 160.13 97.91 83.74 27 I5 Intron 0 12.41 13.11 14.99 10.72 10.98 4.30 10.87 6.04 3.24 7.01 15.89 12.24 27.66 16.24 8.40 10.45 17.42 15.12 11.20 16.21 9.02 14.66 13.77 28 I5_AR1 ActiveIntronRegion 0 12.70 13.42 15.34 10.95 11.21 4.40 11.12 6.16 3.30 7.15 16.24 12.53 28.31 16.59 8.57 10.70 17.79 15.48 11.47 16.60 9.23 14.98 14.10 29 E6_Aa NovelBoundary 0 22.52 14.60 29.39 11.45 20.20 15.39 41.47 35.69 12.64 24.87 22.43 18.91 13.64 16.66 24.97 36.32 8.79 29.14 4.42 14.45 29.47 27.80 10.93 30 ER6a ExonRegion 0 98.04 180.51 60.35 117.38 106.70 186.84 101.18 175.51 278.58 199.01 99.78 129.06 132.65 133.22 108.15 131.95 108.89 202.68 90.63 206.06 135.11 132.47 121.07 31 E6a_E7a KnownJunction 0 93.13 164.51 65.46 157.62 100.68 180.46 162.17 260.90 361.25 264.51 76.49 75.92 87.82 127.97 89.25 96.90 109.02 264.35 112.47 166.89 134.43 118.92 128.98 32 I6_AR1 ActiveIntronRegion 0 3.45 2.41 4.60 6.93 15.47 4.89 5.69 11.84 7.64 8.87 6.88 7.51 22.70 3.98 3.72 2.64 2.94 0.27 1.89 2.52 0.00 5.56 2.18 33 ER7a ExonRegion 0 101.36 196.03 75.61 126.21 154.50 211.34 125.91 182.58 282.93 219.75 94.74 104.92 91.43 142.86 125.40 137.45 97.89 215.64 121.79 200.08 138.48 101.84 159.59 34 E7a_E8a KnownJunction 0 98.17 203.58 97.28 137.11 110.78 78.36 67.57 163.39 249.07 172.19 78.07 54.17 45.45 84.23 94.57 133.47 86.96 153.21 71.15 147.84 102.18 61.97 55.83 35 ER7b ExonRegion 0 82.16 153.63 89.62 122.47 86.60 82.69 63.25 159.33 239.67 179.59 89.97 75.57 76.11 73.68 83.87 130.23 76.52 156.39 76.01 173.79 98.67 72.26 71.55 36 ER8a ExonRegion 0 165.27 307.76 136.93 276.69 252.21 203.18 177.45 256.50 305.53 211.63 97.15 99.90 94.03 96.33 120.32 88.31 82.75 95.30 87.41 161.61 68.60 124.97 75.44