Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 LAG3 Gene 0 21.58 6.59 17.97 5.45 17.60 7.75 5.79 21.37 19.18 20.71 1.66 0.36 0.00 1.27 1.80 8.72 1.92 18.31 9.51 11.84 2.29 4.95 4.24 2 441671 Transcript 0 0.00 0.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.45 1.06 0.00 1.04 0.00 3 203629 Transcript 0 41.36 11.09 22.56 10.67 40.68 7.78 9.80 31.21 29.49 34.05 2.40 0.00 0.00 1.24 0.73 7.35 2.44 17.35 9.11 9.66 2.06 7.73 1.99 4 IG27 Intergenic 0 2.81 5.32 12.47 2.93 13.29 3.41 7.73 11.52 6.49 18.28 1.17 0.00 0.18 0.25 0.16 0.11 0.13 21.07 14.01 10.89 1.84 1.42 2.67 5 IG27_AR1 ActiveIntergenicRegion 0 4.00 3.29 13.96 2.82 9.06 3.84 7.48 15.82 8.94 22.66 1.11 0.00 0.45 0.37 0.20 0.00 0.32 23.03 19.11 11.23 1.69 2.00 2.54 6 IG27_AR2 ActiveIntergenicRegion 0 5.14 6.10 16.34 3.96 14.91 6.72 6.12 12.84 15.70 25.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33.26 10.47 14.79 3.15 0.69 0.00 7 IG27_SR1 SilentIntergenicRegion 0 3.97 6.10 17.31 5.45 14.72 1.83 5.46 14.26 11.89 25.95 0.24 0.00 0.00 0.00 0.00 0.00 0.00 38.57 15.53 12.23 8.54 2.08 0.00 8 IG27_AR3 ActiveIntergenicRegion 0 3.74 3.35 17.16 5.13 15.42 2.37 6.39 13.42 11.12 26.04 1.93 0.00 0.00 0.76 0.51 0.00 0.00 41.63 18.55 12.64 9.98 2.08 2.25 9 IG27_SR2 SilentIntergenicRegion 0 1.89 6.76 11.20 2.90 16.15 3.05 8.03 8.46 4.38 14.81 1.24 0.00 0.00 0.16 0.13 0.20 0.00 18.79 10.49 10.52 1.66 1.02 2.89 10 ER1a ExonRegion 0 3.98 3.31 5.07 3.09 8.38 8.27 2.49 13.35 8.80 6.47 0.48 0.00 0.00 1.32 2.42 10.06 1.50 12.55 8.38 8.02 2.21 5.68 3.68 11 E1_Da NovelBoundary 0 6.59 3.35 11.47 1.43 12.22 0.00 7.60 16.80 6.16 15.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.00 4.71 2.68 0.00 0.00 0.00 12 E1a_E2a KnownJunction 0 0.00 0.00 1.12 1.40 0.00 0.00 0.00 8.63 6.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.68 0.00 0.00 0.00 0.00 2.51 0.00 13 I1 Intron 0 4.23 4.80 13.59 2.95 12.14 3.99 6.01 19.64 9.02 22.02 1.75 1.29 0.00 0.73 0.00 0.54 0.60 14.83 9.25 14.29 0.80 2.65 1.60 14 I1_AR1 ActiveIntronRegion 0 4.26 4.83 13.69 2.97 12.23 4.02 6.05 19.78 9.08 22.18 1.77 1.30 0.00 0.73 0.00 0.54 0.60 14.94 9.32 14.39 0.81 2.67 1.61 15 E2_Aa NovelBoundary 0 3.19 3.16 25.04 4.13 7.98 2.67 11.84 9.94 19.01 28.88 2.11 0.00 0.00 2.12 0.00 0.00 0.00 25.12 22.40 11.63 2.35 2.33 4.35 16 ER2a ExonRegion 0 4.65 2.68 15.37 5.51 6.56 1.90 6.02 19.06 10.86 8.48 1.32 0.00 0.00 1.38 1.00 3.27 1.92 23.33 6.59 12.16 0.76 4.22 1.01 17 E2_Da NovelBoundary 0 2.74 3.22 32.52 4.76 15.20 5.79 1.90 22.76 20.23 31.56 2.05 0.00 0.00 2.35 0.00 0.00 0.00 23.13 9.41 8.12 0.00 0.00 0.00 18 E2a_E3a KnownJunction 0 10.59 5.72 1.80 0.00 11.80 2.44 4.02 8.54 5.87 1.67 0.00 0.00 0.00 0.00 0.00 7.18 9.07 7.30 0.00 3.07 0.00 2.57 0.00 19 I2 Intron 0 2.46 2.36 14.06 2.07 6.22 3.73 2.69 6.36 6.15 12.91 1.97 0.00 0.00 0.56 0.42 2.16 0.48 19.35 8.33 8.04 0.64 0.61 1.71 20 I2_AR1 ActiveIntronRegion 0 2.55 2.55 14.90 2.23 6.30 3.85 2.79 6.87 6.09 13.24 1.99 0.00 0.00 0.60 0.46 2.33 0.52 20.18 8.57 8.53 0.69 0.65 1.84 21 ER3a ExonRegion 0 4.09 1.74 6.10 0.44 3.40 3.23 1.73 10.80 10.03 10.28 1.13 0.00 0.00 0.67 2.54 4.39 1.18 10.44 2.87 7.76 0.37 0.53 1.47 22 E3a_E4a KnownJunction 0 16.89 5.79 26.23 1.76 4.33 5.11 0.00 28.63 16.35 26.78 4.58 0.00 0.00 0.00 4.45 8.54 8.32 31.50 4.80 15.79 0.00 2.39 0.00 23 ER4a ExonRegion 0 19.18 6.66 31.40 3.63 18.49 10.09 7.54 23.64 21.85 29.33 2.36 0.74 0.00 2.19 2.05 10.37 4.71 31.78 12.79 13.43 2.08 6.19 6.95 24 E4_Da NovelBoundary 0 6.37 0.00 16.65 1.40 10.87 4.54 5.61 9.98 8.56 24.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21.39 21.27 3.26 2.59 10.84 7.68 25 E4a_E5a KnownJunction 0 48.23 8.49 30.01 14.68 42.02 8.23 21.64 35.98 34.84 28.45 0.00 0.00 0.00 2.47 4.45 15.38 0.00 30.68 4.42 11.19 0.00 5.94 12.38 26 I4 Intron 0 15.87 0.51 7.76 1.78 7.36 2.06 2.48 5.15 3.91 10.04 1.69 0.45 0.00 0.74 0.00 2.60 0.00 7.69 5.57 3.46 0.00 2.60 1.10 27 I4_SR1 SilentIntronRegion 0 15.95 0.51 7.80 1.79 7.39 2.07 2.49 5.18 3.93 10.09 1.70 0.45 0.00 0.74 0.00 2.61 0.00 7.73 5.60 3.47 0.00 2.62 1.11 28 ER5a ExonRegion 0 39.96 10.20 31.57 8.32 31.03 10.58 8.39 23.50 31.69 27.21 2.21 1.91 0.00 1.29 1.18 15.13 1.22 16.81 10.21 19.83 4.48 5.15 7.85 29 E5a_E6a KnownJunction 0 59.64 11.77 31.28 12.75 84.13 5.11 19.08 20.17 32.84 45.75 2.68 0.00 0.00 2.41 0.00 12.05 0.00 14.51 12.52 15.40 0.00 15.98 0.00 30 ER5b ExonRegion 0 0.00 0.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.45 1.06 0.00 1.04 0.00 31 E6_Aa NovelBoundary 0 0.00 2.57 16.08 0.00 7.47 2.50 2.25 2.42 0.00 2.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.78 0.00 0.00 0.00 0.00 0.00 32 ER6a ExonRegion 0 52.52 12.63 30.45 12.93 42.67 13.95 12.43 41.10 34.61 46.71 2.71 0.00 0.00 2.36 1.29 11.61 1.75 31.94 20.34 16.79 3.70 10.01 5.58 33 E6_Da NovelBoundary 0 40.23 23.09 17.27 2.06 24.70 0.00 3.80 14.17 7.35 16.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.64 9.32 17.45 3.15 11.88 3.93 34 E6a_E7a KnownJunction 0 29.41 15.00 19.19 13.58 42.70 11.58 10.51 42.51 35.33 34.79 2.32 0.00 0.00 2.12 0.00 4.36 4.68 16.66 0.00 5.05 0.00 5.51 0.00 35 I6 Intron 0 15.53 4.26 8.29 2.13 9.35 7.05 5.09 4.50 4.50 4.18 1.35 0.00 0.00 0.00 0.00 1.04 0.00 4.49 4.45 8.18 0.00 2.18 0.00 36 I6_AR1 ActiveIntronRegion 0 21.52 3.47 8.04 1.59 14.10 4.58 6.10 3.38 5.07 6.16 2.30 0.00 0.00 0.00 0.00 2.41 0.00 6.20 4.65 7.36 0.00 1.56 0.00 37 I6_AR2 ActiveIntronRegion 0 12.59 4.69 8.54 2.42 7.01 8.44 4.60 5.15 4.26 3.22 0.87 0.00 0.00 0.00 0.00 0.34 0.00 3.68 4.36 8.69 0.00 2.54 0.00 38 E7_Aa NovelBoundary 0 6.52 11.77 48.17 6.79 11.97 0.00 5.87 11.79 5.90 18.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21.89 8.66 13.04 0.00 2.76 0.00 39 ER7a ExonRegion 0 35.24 13.66 23.66 11.05 29.43 10.27 9.56 41.11 29.28 38.25 4.16 0.00 0.00 0.14 1.59 10.10 2.52 18.53 11.99 14.05 4.83 4.07 3.63 40 E7_Da NovelBoundary 0 51.19 22.69 38.38 16.71 41.43 11.58 11.26 22.47 9.78 13.83 0.00 0.00 0.00 2.24 0.00 0.00 0.00 23.88 12.52 14.89 0.00 0.00 0.00 41 E7a_E8a KnownJunction 0 41.04 6.25 19.69 9.36 34.30 2.90 4.24 26.66 28.07 24.79 2.00 0.00 0.00 0.00 0.00 3.33 4.49 14.09 4.80 0.00 3.09 6.98 0.00 42 E8_Aa NovelBoundary 0 12.74 0.00 9.85 3.90 4.07 0.00 0.00 9.73 4.95 15.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.80 7.91 12.02 0.00 0.00 0.00 43 ER8a ExonRegion 0 30.28 7.21 11.12 4.32 10.87 2.89 2.98 15.70 16.80 14.01 0.53 0.00 0.00 0.39 1.49 2.63 1.21 8.35 5.04 6.64 0.73 3.84 2.70