Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TNFRSF1A Gene 0 201.21 6.87 83.89 61.05 97.87 52.57 43.40 97.17 74.76 40.50 150.19 60.21 69.27 141.45 130.39 124.73 82.61 1.30 12.66 2.26 681.50 511.75 353.51 2 440083 Transcript 0 27.77 16.63 2.83 4.78 7.09 6.04 14.97 8.98 5.03 3.29 25.48 7.23 21.42 7.15 27.75 29.85 9.53 4.65 22.46 15.36 34.09 34.07 20.88 3 162749 Transcript 0 317.79 9.55 133.85 113.44 143.63 58.39 54.26 168.93 124.53 66.19 221.47 150.79 146.04 220.61 181.53 202.48 113.54 0.61 16.87 0.55 967.95 799.07 621.86 4 ER1a ExonRegion 1 136.11 3.22 43.11 21.26 112.57 79.07 53.51 45.45 43.70 16.05 111.03 16.60 27.01 81.93 81.82 92.44 75.81 0.00 14.00 0.46 542.73 329.67 254.82 5 E1a_E2a KnownJunction 1 17.41 0.00 64.96 46.48 53.48 2.90 14.04 70.93 67.79 30.27 128.51 6.30 28.73 100.77 68.73 84.68 77.98 0.00 8.75 3.13 421.75 651.65 491.18 6 I1_SR10 SilentIntronRegion 0 24.78 0.00 6.00 2.12 9.95 1.01 2.14 5.74 8.69 1.91 4.97 15.08 4.24 4.00 4.12 7.67 3.23 0.00 0.00 0.00 30.50 6.27 8.84 7 ER2a ExonRegion 0 177.42 5.07 84.26 60.93 306.36 177.74 144.04 99.75 82.47 43.90 214.98 69.47 96.12 171.71 140.20 149.09 125.33 1.02 20.64 1.75 807.66 621.44 420.63 8 E2a_E3a KnownJunction 0 451.64 12.23 105.56 102.05 210.19 121.52 122.60 130.53 107.84 59.74 224.53 129.34 62.98 213.79 185.18 164.74 151.66 4.27 18.92 2.49 939.14 712.27 421.78 9 ER3a ExonRegion 0 308.86 6.56 127.22 93.15 73.20 39.63 27.61 152.97 114.32 68.35 212.39 94.17 107.58 183.76 131.50 158.05 123.77 0.96 12.15 0.97 1025.54 841.48 399.91 10 E3a_E4a KnownJunction 0 574.55 10.00 142.19 110.31 71.31 55.48 38.20 142.77 155.29 71.67 291.76 121.99 185.70 227.80 244.52 199.26 151.66 0.00 4.71 0.00 1332.97 1072.26 479.48 11 ER4a ExonRegion 0 428.93 13.49 154.53 109.33 150.64 58.17 59.66 192.05 133.06 62.25 310.57 152.43 178.16 234.19 189.63 215.90 131.82 1.87 19.62 0.00 1283.35 1110.24 615.29 12 E4a_E5a KnownJunction 0 510.68 16.71 188.14 124.86 254.07 50.71 113.76 184.92 146.56 54.29 296.65 114.79 197.39 194.36 202.11 200.37 158.77 0.00 13.65 0.00 1310.42 1160.86 624.69 13 ER5a ExonRegion 0 317.91 9.45 139.74 120.85 209.08 44.50 63.23 179.50 127.78 56.10 302.34 129.34 153.05 215.68 170.15 206.73 132.41 2.81 8.14 1.37 1271.65 1064.60 508.30 14 E5a_E6a KnownJunction 0 27.12 0.00 1.80 3.23 0.00 2.90 0.00 6.74 1.71 0.00 26.85 0.00 6.82 4.94 19.04 23.67 0.00 0.00 9.32 0.00 35.83 25.84 11.18 15 E5a_E7a KnownJunction 0 442.00 11.84 119.84 124.53 260.44 77.17 93.01 208.62 122.28 65.14 316.50 140.45 176.29 229.44 128.07 225.58 145.77 2.57 16.47 0.00 1264.46 983.78 573.73 16 E5a_E8a NovelJunction 0 24.67 0.00 36.87 14.88 0.00 0.00 0.00 0.00 13.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.80 0.00 52.57 133.61 130.26 17 E6_Aa NovelBoundary 0 44.38 28.94 40.51 45.38 28.44 39.18 36.66 28.96 33.74 19.72 7.58 7.35 6.82 2.35 4.45 24.78 21.22 19.32 31.44 12.21 11.24 20.15 38.41 18 ER6a ExonRegion 1 28.43 33.27 3.86 6.33 14.19 9.19 29.94 11.22 8.34 6.58 24.11 14.46 36.02 9.35 36.46 36.03 19.06 9.29 35.61 30.71 32.35 42.30 30.59 19 E6_Da NovelBoundary 0 2935.71 2513.70 1702.48 1719.46 2196.27 1706.40 2981.07 1848.21 1656.70 1595.84 945.66 520.67 548.02 584.20 852.47 2104.06 1926.97 2244.87 1698.50 2455.63 1479.57 1068.52 2083.03 20 I6 Intron 0 49.92 1.08 5.82 5.83 13.65 1.75 5.35 8.49 10.17 3.27 6.98 6.03 11.55 6.74 9.33 8.84 3.86 0.00 2.03 0.45 25.98 29.66 12.17 21 I6_AR1 ActiveIntronRegion 0 50.03 1.08 5.83 5.84 13.67 1.76 5.36 8.51 10.19 3.28 7.00 6.04 11.57 6.75 9.35 8.86 3.87 0.00 2.03 0.45 26.04 29.73 12.19 22 ER7a ExonRegion 0 355.66 8.74 149.71 137.21 163.55 103.73 52.22 236.14 137.67 80.07 328.23 163.29 186.90 287.49 199.64 271.87 141.80 0.80 19.41 0.09 1189.97 1078.36 758.53 23 E7a_E8a KnownJunction 0 252.49 12.96 187.16 192.08 122.75 78.25 55.38 246.53 186.63 90.69 288.34 199.11 138.95 342.11 319.06 340.00 111.27 0.00 32.38 0.00 1127.38 1539.29 1078.48 24 ER8a ExonRegion 0 209.70 11.54 174.33 142.52 127.12 83.26 55.71 189.61 174.31 89.71 276.79 161.33 156.17 250.50 198.38 254.85 159.28 1.23 22.41 3.70 1217.07 1082.55 757.27 25 E8a_E9a KnownJunction 0 257.53 5.99 134.80 121.93 182.09 42.82 61.74 158.26 129.02 63.02 246.85 239.63 230.99 246.51 174.79 97.84 132.68 0.00 4.80 0.00 1081.04 531.51 492.20 26 E9a_E10a KnownJunction 0 644.86 21.51 160.88 103.35 209.93 41.00 79.67 184.75 136.14 80.21 195.94 217.27 192.84 246.63 210.64 327.52 120.43 0.00 34.17 0.00 918.81 923.22 885.47 27 ER9a ExonRegion 0 352.73 11.99 180.17 140.61 157.22 50.21 63.37 216.95 167.34 83.84 233.28 247.08 225.12 228.72 168.97 210.20 129.08 0.00 18.01 0.22 1109.45 721.19 699.53 28 ER10a ExonRegion 0 338.29 8.39 102.91 64.39 96.14 51.12 33.79 121.36 95.53 56.95 165.11 95.44 106.90 190.79 176.23 184.50 114.37 0.49 17.43 0.75 867.33 598.78 527.89 29 E10a_E11a KnownJunction 0 205.37 0.00 70.90 64.96 78.01 36.68 26.45 69.17 52.75 25.38 85.76 31.51 33.60 85.11 126.96 50.07 41.98 0.00 0.00 0.00 514.11 278.12 252.08 30 ER11a ExonRegion 1 119.28 2.52 57.78 42.85 39.06 19.65 21.27 57.92 43.62 26.94 77.93 12.76 12.64 98.81 112.56 62.37 38.74 1.03 3.59 0.75 389.85 253.86 193.46