Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	IFFO1	Gene	0	72.30	13.15	53.37	33.69	32.83	39.68	22.62	41.13	35.26	41.04	38.02	13.03	20.54	64.46	65.19	71.77	54.21	47.62	36.90	28.30	112.36	47.14	71.78
2	488007	Transcript	0	87.27	8.62	51.24	25.60	37.85	27.94	21.11	49.92	24.39	51.26	39.75	15.32	19.13	59.84	60.50	86.60	63.00	40.56	37.19	18.96	106.88	62.02	98.45
3	494107	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	336604	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	487279	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	396840	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	358846	Transcript	0	0.00	0.00	44.47	21.04	0.00	0.00	0.00	22.76	13.31	30.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00	28.81	0.00	0.00	0.00	0.00	0.00
8	436152	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
9	396830	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
10	356896	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
11	465801	Transcript	0	4.75	1.02	4.49	4.57	3.79	6.11	4.96	4.50	4.83	5.13	2.90	0.36	1.68	7.77	5.29	6.19	6.05	5.59	2.39	8.15	2.57	1.91	2.20
12	416019	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
13	471408	Transcript	0	7.89	1.12	6.89	3.86	2.11	6.79	4.57	6.14	6.46	7.42	2.30	0.98	1.51	1.54	5.99	4.28	6.66	9.46	5.33	6.67	6.55	2.18	6.20
14	472558	Transcript	1	88.22	3.30	19.59	19.04	20.23	27.01	17.51	35.35	21.39	14.48	24.89	46.71	65.87	95.55	78.99	88.76	60.22	26.23	28.67	9.86	91.12	66.99	131.84
15	423501	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
16	ER1a	ExonRegion	0	5.64	0.45	1.50	0.00	0.00	4.28	0.44	4.23	1.65	1.27	1.72	0.00	0.00	2.53	7.09	8.59	2.20	3.28	2.48	0.95	6.37	3.70	13.05
17	ER1b	ExonRegion	0	17.28	6.45	27.10	12.85	10.99	23.42	11.62	23.66	21.13	23.28	26.64	4.40	9.01	52.52	44.38	56.83	41.75	30.23	43.31	13.75	90.40	28.15	54.56
18	E1a_E3a	KnownJunction	0	46.30	0.00	24.90	7.96	0.00	10.90	4.42	12.82	4.57	19.31	18.22	0.00	8.28	46.09	34.74	31.87	4.77	21.64	0.00	3.00	16.25	4.90	17.33
19	E1a_E4a	KnownJunction	0	57.20	8.81	59.73	42.02	16.38	37.59	7.82	54.83	44.47	42.47	79.44	11.85	13.47	54.27	77.26	135.09	50.02	69.72	35.20	26.85	191.88	55.78	147.17
20	I1	Intron	0	8.92	4.92	6.89	8.43	8.74	10.93	12.57	9.47	8.66	11.08	5.78	7.02	9.05	16.56	10.23	14.38	12.13	13.34	13.53	15.64	8.39	3.37	5.80
21	I1_SR1	SilentIntronRegion	0	8.98	4.96	6.76	8.55	8.90	11.06	12.92	9.48	8.82	11.19	5.81	7.16	9.37	16.59	10.32	14.65	12.14	13.30	13.60	15.67	8.32	3.39	5.85
22	I1_AR1	ActiveIntronRegion	0	7.45	3.65	10.84	4.98	4.12	7.50	2.34	9.37	4.13	7.99	5.00	3.27	0.00	15.95	7.74	6.61	12.17	14.80	11.62	15.06	10.39	2.88	4.58
23	E2_Aa	NovelBoundary	0	10.37	0.00	8.54	15.32	4.33	14.59	13.47	8.83	16.46	14.42	11.63	0.00	0.00	23.49	28.18	7.69	16.92	19.94	13.74	24.61	14.52	8.63	8.11
24	ER2a	ExonRegion	0	9.50	2.03	7.15	9.14	7.58	12.21	9.92	9.00	8.19	10.25	5.80	0.72	3.36	15.54	10.58	12.38	12.10	11.18	4.78	16.30	5.15	3.82	4.40
25	E2_Da	NovelBoundary	0	7.11	0.00	18.21	7.96	11.12	33.84	4.24	10.10	9.03	20.42	2.32	0.00	19.80	29.43	9.64	36.57	9.16	13.18	4.24	17.58	6.12	0.00	3.41
26	E2a_E3a	KnownJunction	0	0.00	0.00	1.83	0.00	0.00	0.00	0.00	0.00	1.48	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	E3_Aa	NovelBoundary	1	19.19	12.96	16.62	16.31	11.63	34.98	25.17	14.09	10.30	6.96	5.11	0.00	34.09	32.55	8.90	12.30	9.44	20.06	0.00	25.63	9.45	2.69	19.97
28	ER3a	ExonRegion	0	36.24	7.92	31.86	14.86	20.65	20.71	12.38	21.87	24.35	30.62	27.84	4.70	9.73	51.88	32.08	42.73	25.85	28.08	12.08	10.90	25.20	7.35	16.26
29	E3_Da	NovelBoundary	0	14.45	2.43	8.93	10.79	12.31	4.94	17.89	11.17	20.28	15.71	3.90	0.00	0.00	2.18	4.57	18.88	7.85	9.37	14.68	22.56	2.29	2.69	13.83
30	E3a_E4a	KnownJunction	0	58.53	5.85	24.57	27.84	24.53	22.49	15.77	30.48	35.27	38.41	32.32	11.70	0.00	36.02	18.30	53.92	25.99	41.49	31.72	27.04	22.55	11.45	32.52
31	E4_Aa	NovelBoundary	0	18.60	3.22	12.98	23.24	14.26	5.05	12.19	16.22	16.46	12.76	7.37	0.00	0.00	7.06	0.00	26.66	13.56	29.89	27.58	13.68	20.08	7.72	8.02
32	ER4a	ExonRegion	0	103.65	7.64	89.75	56.21	34.62	47.51	19.30	83.70	78.94	87.58	86.69	24.66	23.02	116.64	139.00	184.18	101.83	118.93	63.22	40.88	204.34	97.48	182.25
33	E4a_E5a	KnownJunction	0	116.98	24.47	115.31	72.78	43.55	71.32	30.12	103.84	78.99	105.84	82.97	29.41	39.12	168.23	148.84	136.97	168.12	127.51	54.50	61.68	245.81	71.83	149.56
34	ER4b	ExonRegion	0	104.77	14.02	101.40	61.38	31.73	54.49	24.68	101.61	77.81	98.47	80.08	27.52	28.81	158.12	160.29	156.99	147.72	137.86	62.80	50.91	234.30	99.19	162.67
35	ER5a	ExonRegion	0	86.60	16.08	93.26	64.98	48.08	86.91	39.80	94.96	75.64	96.09	94.85	31.57	53.06	130.08	116.26	156.81	128.46	119.74	69.45	59.20	309.85	82.04	106.21
36	E5a_E6b	KnownJunction	0	75.57	32.56	98.37	86.44	54.84	122.20	50.21	102.81	89.18	78.89	88.81	6.30	67.20	143.39	118.30	170.81	101.92	101.31	40.75	68.07	187.37	67.79	125.14
37	ER6a	ExonRegion	0	7.89	1.12	6.89	3.86	2.11	6.79	4.57	6.14	6.46	7.42	2.30	0.98	1.51	1.54	5.99	4.28	6.66	9.46	5.33	6.67	6.55	2.18	6.20
38	E6_Ab	KnownBoundary	0	2.89	0.00	11.50	2.06	7.98	14.08	3.58	0.00	2.92	4.67	2.32	0.00	0.00	0.00	0.00	0.00	0.00	23.01	8.47	9.01	6.05	0.00	8.71
39	ER6b	ExonRegion	0	103.24	19.78	91.99	66.50	50.72	77.64	37.21	93.08	78.27	98.03	74.79	33.83	45.06	116.61	135.68	148.88	100.98	84.13	79.29	53.45	222.24	104.01	116.71
40	E6a_E7a	KnownJunction	1	97.65	5.85	38.88	19.44	27.50	12.10	10.02	38.81	30.93	32.56	16.64	30.31	12.99	80.70	56.37	71.86	22.53	29.56	11.67	2.68	100.14	44.33	56.94
41	E6a_E7b	KnownJunction	0	0.00	2.63	4.14	1.30	0.00	0.00	1.68	3.94	6.89	3.33	0.00	6.30	13.96	8.89	9.15	10.42	11.97	3.69	0.00	0.00	10.44	10.29	3.24
42	E6a_E8c	KnownJunction	0	19.93	2.50	38.47	35.09	52.38	48.21	17.14	47.60	31.34	47.81	25.95	12.60	6.66	23.78	22.25	22.22	25.62	42.86	27.39	48.13	41.82	20.70	13.06
43	ER7a	ExonRegion	0	43.92	2.54	17.77	16.35	16.05	12.38	5.30	26.36	17.91	22.65	15.95	28.14	23.45	67.81	56.57	70.59	31.36	16.63	6.37	2.13	91.45	31.25	48.45
44	ER7b	ExonRegion	0	38.52	4.07	21.08	16.35	16.05	7.70	6.62	24.54	16.80	22.71	15.08	26.84	23.45	64.32	48.16	61.82	38.95	19.22	6.37	2.55	93.44	34.59	46.99
45	I7	Intron	0	99.20	11.34	16.59	14.26	32.60	34.83	22.42	15.42	16.72	20.11	26.74	25.08	26.83	45.67	38.30	55.23	42.94	13.64	24.97	16.25	52.32	30.11	53.97
46	I7_AR1	ActiveIntronRegion	0	100.01	11.43	16.73	14.37	32.86	35.12	22.60	15.55	16.86	20.27	26.95	25.29	27.05	46.03	38.59	55.68	43.29	13.76	25.17	16.39	52.74	30.36	54.41
47	E8_Aa	NovelBoundary	1	99.35	14.80	35.60	26.74	119.35	35.15	59.05	42.10	34.20	30.14	30.11	77.43	131.16	70.28	51.05	159.53	94.72	25.54	26.54	22.88	72.09	103.97	74.78
48	ER8a	ExonRegion	1	88.22	3.30	19.59	19.04	20.23	27.01	17.51	35.35	21.39	14.48	24.89	46.71	65.87	95.55	78.99	88.76	60.22	26.23	28.67	9.86	91.12	66.99	131.84
49	E8_Ab	KnownBoundary	1	100.09	5.85	54.34	48.41	16.55	40.72	20.80	78.49	51.45	33.31	53.65	55.97	90.25	80.64	91.72	139.11	114.07	54.35	41.32	22.37	189.72	147.88	289.30
50	ER8b	ExonRegion	1	141.44	18.10	29.98	25.00	51.83	41.57	24.12	39.54	36.71	30.08	36.85	35.16	68.03	71.32	59.52	97.57	65.81	41.17	38.44	22.00	105.53	67.23	119.63
51	E8_Ac	KnownBoundary	0	95.28	12.10	29.57	14.32	27.08	31.29	27.91	24.89	28.67	12.11	24.27	0.00	38.31	49.44	37.58	41.61	26.74	28.89	4.80	17.00	65.92	39.01	60.61
52	ER8c	ExonRegion	0	171.03	37.16	102.88	48.95	57.54	94.76	37.87	75.61	67.48	70.66	75.99	31.91	54.61	131.58	132.88	158.01	107.50	105.60	71.82	66.63	243.21	93.32	136.11
53	E8_Da	NovelBoundary	0	17.26	0.00	3.08	8.12	3.90	13.12	6.09	16.96	14.15	6.66	0.00	18.91	0.00	2.47	13.35	0.00	0.00	9.87	0.00	3.13	6.12	4.96	14.94
54	E8a_E9a	KnownJunction	0	225.52	49.60	162.83	74.08	94.99	100.51	54.72	114.19	84.58	120.40	84.39	37.51	76.78	131.73	220.78	200.29	158.20	131.74	86.87	68.97	252.73	137.35	201.88
55	E9_Aa	NovelBoundary	0	3.48	0.00	5.29	5.33	8.66	2.44	2.03	13.27	9.03	9.08	0.00	0.00	0.00	4.94	4.45	3.76	22.44	14.09	25.22	14.76	19.77	0.00	23.90
56	ER9a	ExonRegion	0	127.41	28.08	157.95	83.92	78.33	102.90	51.19	113.55	93.29	118.97	103.77	30.27	39.15	147.19	126.70	151.92	155.85	126.98	97.56	77.74	289.41	118.55	165.96
57	E9_Da	KnownBoundary	0	99.28	12.50	49.35	30.23	35.57	11.41	18.02	59.64	27.52	63.56	46.01	11.40	6.49	41.20	44.13	92.28	76.86	46.93	29.27	43.40	137.39	76.17	76.14
58	E9a_E9b	KnownJunction	0	27.12	5.53	84.95	49.28	25.13	43.78	26.37	71.67	49.22	70.86	51.54	24.01	12.66	55.39	75.28	65.54	74.24	65.37	46.50	41.29	126.64	33.98	52.24
59	E9a_E9c	KnownJunction	0	6.30	5.92	33.50	13.45	8.49	5.62	4.37	32.16	21.90	21.92	15.27	11.55	0.00	28.67	22.25	10.17	29.27	13.47	39.62	28.06	44.05	19.23	19.12
60	ER9b	ExonRegion	0	87.27	8.62	51.24	25.60	37.85	27.94	21.11	49.92	24.39	51.26	39.75	15.32	19.13	59.84	60.50	86.60	63.00	40.56	37.19	18.96	106.88	62.02	98.45
61	E9_Ab	KnownBoundary	0	13.26	3.03	37.25	7.03	15.87	17.94	17.00	11.09	9.52	27.69	10.00	0.00	6.33	12.24	8.90	7.95	21.13	7.34	4.52	2.94	35.52	10.72	7.17
62	E9_Ac	KnownBoundary	0	30.97	0.00	31.46	8.56	25.47	7.95	10.78	13.35	17.51	21.89	15.64	0.00	0.00	7.24	16.32	12.48	12.90	12.60	4.42	7.80	36.33	16.84	34.06
63	ER9c	ExonRegion	0	80.43	13.56	149.90	70.42	74.03	72.13	43.25	99.10	77.81	118.51	91.49	33.19	40.65	121.27	102.51	117.89	138.64	97.31	88.13	56.74	230.65	70.84	117.47
64	ER9d	ExonRegion	0	130.05	20.31	169.70	109.95	82.02	101.18	39.65	134.52	127.26	143.38	112.15	35.48	47.92	172.47	151.53	211.80	167.70	143.62	100.44	60.08	288.78	135.36	234.42
65	E9_Db	NovelBoundary	0	2.82	6.25	8.01	11.69	0.00	2.16	17.67	6.53	2.34	10.13	2.00	0.00	0.00	4.41	4.45	4.36	8.70	10.78	14.02	11.19	8.59	5.69	8.37
66	E9b_E10a	KnownJunction	0	281.53	45.85	198.69	165.35	76.57	141.62	56.79	156.99	106.89	146.13	121.61	30.46	38.15	146.68	139.32	184.14	229.17	119.59	106.07	82.45	296.65	124.73	242.43
67	I9_AR1	ActiveIntronRegion	0	9.73	3.52	12.09	17.85	26.53	14.04	13.20	16.98	8.84	13.68	1.55	6.97	7.05	3.92	11.32	12.00	8.74	6.98	14.10	11.63	17.01	6.78	6.95
68	I9_SR2	SilentIntronRegion	0	1.98	3.26	5.78	6.59	7.96	5.27	2.99	7.33	2.69	5.43	1.26	0.00	4.81	2.04	4.02	11.58	6.90	4.86	14.58	10.67	10.74	2.32	1.73
69	E10_Aa	NovelBoundary	0	31.49	15.19	10.64	17.05	16.30	22.71	1.85	13.97	11.89	22.86	1.95	0.00	0.00	9.77	23.73	4.36	17.77	6.55	0.00	15.72	12.17	8.27	18.52
70	ER10a	ExonRegion	0	165.98	29.71	116.78	84.71	61.81	90.53	43.16	95.12	79.49	105.02	88.54	22.54	37.23	130.70	108.14	118.50	113.49	94.02	85.96	50.14	213.24	89.32	116.50
71	E10a_E11a	KnownJunction	0	185.59	45.78	127.14	87.20	76.40	89.55	37.94	82.27	80.32	125.69	58.75	26.86	33.60	123.67	93.08	137.83	72.18	97.37	59.58	36.88	200.10	123.26	100.81
72	ER11a	ExonRegion	0	215.42	47.61	91.85	52.86	65.15	113.14	50.43	63.73	48.68	86.79	66.35	37.37	28.24	102.85	116.37	146.60	104.84	71.50	53.53	23.45	166.09	89.00	131.13
73	E11_Da	KnownBoundary	0	51.27	0.00	49.11	18.31	11.63	36.23	14.18	22.76	14.26	26.43	16.69	0.00	0.00	17.01	22.75	32.90	25.06	26.61	0.00	8.37	26.13	18.92	20.15
74	E11a_E11b	KnownJunction	0	0.00	0.00	44.47	21.04	0.00	0.00	0.00	22.76	13.31	30.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00	28.81	0.00	0.00	0.00	0.00	0.00
75	E11_Ab	KnownBoundary	0	53.19	12.17	26.97	22.74	14.86	21.69	7.86	21.11	20.34	26.11	37.11	18.16	0.00	24.13	14.46	30.93	12.53	38.18	8.09	5.24	94.89	34.90	51.30
76	ER11b	ExonRegion	0	133.34	20.74	74.75	38.16	41.74	61.98	32.57	42.52	39.03	58.72	61.08	19.05	9.38	82.83	67.31	68.36	52.81	63.56	24.21	25.53	142.36	55.00	71.65
77	ER11c	ExonRegion	0	202.00	41.69	69.23	41.40	68.50	88.43	58.60	43.28	47.38	63.61	80.72	15.24	34.14	102.61	87.68	94.16	58.29	72.47	37.78	41.06	179.95	62.26	96.56
78	E11_Db	KnownBoundary	0	261.16	67.55	60.58	50.71	107.30	142.36	82.19	50.97	58.54	63.26	75.86	12.30	31.98	110.72	121.27	132.70	69.00	81.99	63.81	58.68	184.28	62.76	110.12
79	ER11d	ExonRegion	0	128.49	23.44	107.64	71.13	62.47	62.92	39.20	64.49	58.12	61.57	58.44	11.47	18.09	100.94	115.32	98.38	72.37	78.47	42.76	52.45	189.18	78.15	102.99
80	E11_Dc	KnownBoundary	0	427.56	50.19	67.44	66.36	210.36	101.59	78.21	49.74	33.91	39.00	46.75	5.70	12.50	62.57	92.47	104.25	61.80	32.08	80.00	36.05	170.01	55.11	168.68
81	ER11e	ExonRegion	0	220.06	21.87	33.45	36.98	112.45	51.54	34.28	19.39	17.56	14.44	29.10	1.29	21.68	52.15	84.69	53.18	41.31	16.68	51.48	17.65	107.21	19.37	89.92
82	E11_Dd	KnownBoundary	0	28.45	0.00	1.63	1.76	15.11	0.00	5.43	1.81	0.00	0.00	0.00	0.00	5.68	7.00	13.23	7.26	17.20	0.00	13.08	5.88	10.01	5.14	0.00
83	E11_De	KnownBoundary	0	0.00	0.00	0.00	4.03	0.00	0.00	1.81	0.00	0.00	1.32	0.00	6.30	0.00	2.12	0.00	4.36	0.00	1.82	0.00	0.00	0.00	0.00	4.35
84	ER11f	ExonRegion	0	12.35	0.17	3.78	7.04	5.35	0.00	4.74	1.58	1.96	1.43	2.26	4.33	3.52	5.01	16.20	5.70	10.45	2.93	6.90	3.90	6.61	0.52	3.67
85	ER11g	ExonRegion	0	8.42	4.02	4.13	3.39	4.61	4.45	9.51	2.78	1.99	1.66	1.91	6.31	7.97	5.55	16.76	10.80	6.03	4.08	8.36	7.90	4.96	2.44	7.55