Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 HYLS1 Gene 0 31.00 57.21 29.14 21.84 22.86 70.64 17.25 15.86 11.44 16.48 61.89 25.92 38.82 67.47 46.56 34.44 78.56 35.27 28.38 35.76 8.93 13.46 12.37 2 356438 Transcript 0 4.85 2.28 1.28 1.46 1.89 1.57 2.79 0.72 0.53 0.35 0.44 2.80 5.14 2.81 5.32 3.86 2.95 1.31 3.22 3.87 0.56 1.17 1.89 3 425380 Transcript 0 15.78 34.38 5.09 5.38 9.98 68.88 8.11 1.85 2.19 2.76 15.06 0.45 1.34 20.46 3.57 23.71 32.78 15.38 14.61 18.31 0.69 0.32 13.05 4 392698 Transcript 0 9.00 25.42 3.41 1.27 9.42 33.93 7.31 2.18 3.18 1.43 16.12 0.00 0.00 10.03 6.28 11.05 23.92 4.67 9.90 13.11 2.20 0.52 9.43 5 ER1a ExonRegion 1 10.70 9.50 3.69 7.18 9.46 7.86 12.70 3.58 2.56 1.73 2.20 10.72 18.53 11.86 24.58 16.53 11.67 6.39 16.08 11.56 2.78 5.79 9.27 6 E1a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 ER2a ExonRegion 0 2.81 4.42 2.57 2.57 2.13 16.53 1.02 1.31 2.59 1.09 5.74 0.90 2.68 6.60 2.07 3.59 9.83 5.97 4.19 4.41 1.37 0.64 0.24 8 E2_Ab KnownBoundary 0 72.24 98.67 19.25 7.06 60.53 294.60 35.82 15.12 4.48 10.21 41.12 0.00 0.00 59.51 31.89 68.79 110.80 39.92 41.51 29.91 24.03 8.63 8.02 9 ER2b ExonRegion 1 52.54 99.96 9.88 3.39 38.53 229.75 26.57 10.91 3.71 6.30 43.73 0.00 0.00 71.75 54.09 58.58 106.00 9.32 24.78 37.59 19.34 6.99 18.60 10 E2a_E3a KnownJunction 0 0.00 11.18 3.76 1.86 6.79 4.60 4.02 1.77 4.51 0.00 9.05 0.00 0.00 3.00 5.32 4.27 8.23 5.64 8.66 6.01 0.00 0.00 4.18 11 E2a_E3b KnownJunction 0 28.75 64.33 7.60 8.19 17.83 121.24 15.19 2.38 1.79 4.43 24.37 0.00 0.00 34.32 5.07 43.83 55.73 24.79 25.04 32.21 0.00 0.00 25.87 12 E2a_E5a NovelJunction 0 10.89 32.36 15.70 2.06 16.38 13.51 5.70 4.93 3.10 7.82 9.48 0.00 0.00 2.65 0.00 15.21 13.28 24.46 9.22 18.73 0.00 3.06 7.51 13 ER3a ExonRegion 0 17.99 39.65 3.06 0.68 12.04 63.27 10.59 2.59 1.85 2.87 23.19 0.00 0.00 17.05 7.25 17.83 39.61 3.70 11.15 20.21 4.41 1.04 14.68 14 ER3b ExonRegion 0 13.17 27.31 9.78 2.50 7.26 51.20 4.32 3.42 3.91 8.57 30.18 10.51 1.05 30.83 16.10 19.53 34.63 6.18 23.79 13.29 3.42 1.28 9.71 15 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 E3a_E5a KnownJunction 0 17.56 30.78 22.29 5.53 8.66 56.67 0.00 2.55 4.66 13.73 55.70 24.61 0.00 47.68 62.30 32.90 51.71 4.06 53.65 14.70 8.28 3.12 8.71 17 I3 Intron 0 2.30 9.19 3.79 4.09 3.62 3.45 3.36 1.53 1.94 2.03 5.10 3.49 15.45 3.84 2.65 2.65 6.32 2.22 2.52 9.06 0.95 1.37 1.36 18 I3_SR1 SilentIntronRegion 0 2.31 9.20 3.80 4.09 3.62 3.45 3.37 1.53 1.95 2.03 5.11 3.50 15.47 3.84 2.65 2.65 6.32 2.22 2.53 9.07 0.95 1.38 1.36 19 Ix Intron 0 11.70 18.92 26.37 21.01 11.31 10.62 8.96 8.21 4.55 15.12 7.17 8.42 14.27 5.02 4.43 2.90 9.88 5.09 7.46 19.24 0.72 2.58 1.34 20 Ix_SR1 SilentIntronRegion 0 12.62 21.74 28.36 22.72 12.49 11.33 9.83 9.45 5.68 16.32 6.83 7.44 15.08 4.91 4.84 2.57 8.97 4.19 6.44 20.69 0.75 3.13 1.09 21 E4_Aa NovelBoundary 0 23.93 9.87 7.27 7.29 7.39 25.50 0.00 4.93 4.22 1.24 11.69 0.00 20.78 0.00 0.00 0.00 7.95 0.00 9.22 20.71 0.00 3.12 3.84 22 ER4a ExonRegion 0 13.55 1.92 0.89 0.12 0.00 0.00 1.23 0.00 0.11 0.00 0.00 3.31 7.16 2.19 2.00 2.76 3.06 0.17 0.00 7.78 0.00 0.08 0.16 23 E4_Da NovelBoundary 0 31.41 15.39 5.09 5.26 8.06 18.34 14.49 7.23 9.26 13.24 9.95 6.15 27.27 7.42 0.00 3.33 8.13 13.43 8.75 23.71 3.15 2.27 7.43 24 E4a_E5a KnownJunction 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 Ix Intron 0 4.67 10.09 8.56 4.48 3.69 16.68 4.01 3.55 6.60 1.41 7.46 1.97 10.88 3.48 3.39 3.28 9.10 2.28 2.63 14.66 0.00 2.30 4.86 26 Ix_AR1 ActiveIntronRegion 0 4.72 10.19 8.65 4.53 3.73 16.85 4.06 3.59 6.67 1.43 7.53 1.99 10.99 3.51 3.42 3.31 9.20 2.30 2.66 14.82 0.00 2.32 4.91 27 E5_Aa NovelBoundary 0 29.26 11.84 15.20 12.05 23.68 27.71 18.86 2.55 7.38 6.07 6.84 5.70 13.64 7.42 8.90 15.89 4.02 10.69 9.22 16.87 0.00 0.00 0.00 28 ER5a ExonRegion 0 52.30 100.83 53.16 38.49 38.58 115.81 27.74 28.38 19.74 30.23 113.42 45.82 67.62 119.70 78.79 56.74 138.16 62.63 46.00 61.18 14.90 23.62 19.89