Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NFRKB Gene 0 66.20 67.94 79.95 99.04 34.43 91.00 23.98 44.78 41.29 54.77 134.71 31.67 57.55 122.22 78.55 104.23 130.11 134.33 89.52 83.69 99.15 55.52 69.32 2 446488 Transcript 0 9.45 8.64 10.83 12.38 5.49 25.39 10.48 11.04 12.56 11.39 32.61 9.28 16.08 41.18 11.64 25.04 29.64 32.13 27.30 17.65 32.37 9.93 29.03 3 304521 Transcript 0 10.52 30.26 22.38 25.11 8.06 23.23 11.61 8.75 18.06 21.79 65.70 6.30 20.13 49.50 19.53 43.07 52.36 82.24 42.35 69.09 58.38 21.92 15.11 4 IG40_AR4 ActiveIntergenicRegion 0 10.79 9.29 0.93 0.00 8.19 27.69 7.92 0.00 0.86 0.00 21.61 0.00 0.00 24.54 10.42 9.09 13.30 6.41 12.33 12.21 17.85 7.44 16.47 5 IG40_SR2 SilentIntergenicRegion 0 0.00 5.62 1.79 4.58 6.47 4.05 2.11 11.98 6.36 7.66 9.13 2.53 3.97 13.83 7.17 12.55 22.51 7.24 21.41 13.95 4.50 11.84 15.70 6 IG40_AR2 ActiveIntergenicRegion 0 9.34 16.42 6.15 9.42 5.59 3.75 3.61 11.18 6.98 6.73 11.55 7.37 12.39 12.09 10.26 9.74 15.90 5.29 10.92 14.76 4.37 9.98 5.50 7 IG40_SR1 SilentIntergenicRegion 0 4.64 4.92 1.15 3.46 3.18 5.95 2.10 2.32 3.40 3.51 4.71 9.00 3.63 11.59 10.57 5.58 4.03 2.18 9.54 11.51 4.14 6.31 0.92 8 IG40_AR1 ActiveIntergenicRegion 0 7.50 5.78 0.87 2.88 6.95 11.69 4.38 4.26 9.55 4.04 13.23 2.53 6.80 12.08 9.38 11.24 17.15 1.09 9.03 10.05 10.40 4.43 5.55 9 ER1a ExonRegion 0 15.90 12.34 10.18 12.16 6.50 19.34 4.58 9.59 16.21 12.52 20.58 5.50 12.31 22.15 12.28 12.27 27.20 5.81 23.95 16.30 22.02 9.73 12.56 10 E1_Ab KnownBoundary 0 20.82 28.09 17.21 12.42 3.48 18.06 12.90 19.06 14.61 7.52 32.22 5.70 6.01 32.02 4.45 19.57 37.77 9.70 32.00 17.00 16.93 26.09 11.61 11 ER1b ExonRegion 0 13.25 15.18 18.58 31.31 9.40 29.37 10.50 25.14 29.37 33.13 94.22 13.74 32.40 78.97 31.95 67.50 96.01 84.78 63.84 63.17 72.90 34.51 37.41 12 E1a_E2a KnownJunction 1 22.89 34.93 18.66 46.98 25.47 84.95 17.58 35.94 33.56 52.03 114.82 12.15 59.41 163.81 24.72 116.89 160.26 123.53 65.51 98.69 110.09 54.93 71.11 13 ER2a ExonRegion 0 30.77 43.24 34.32 57.14 20.89 71.23 16.18 46.89 40.14 47.58 120.05 34.81 46.27 113.58 39.66 103.20 120.74 119.42 87.76 90.31 108.93 49.16 57.93 14 E2a_E3a KnownJunction 0 37.86 30.65 69.75 65.79 28.18 76.72 20.27 46.00 50.38 57.38 112.77 18.61 71.42 144.80 54.76 139.88 87.52 131.49 83.67 93.96 110.09 58.85 65.56 15 ER3a ExonRegion 0 15.49 21.91 43.56 45.33 12.50 40.42 10.77 27.06 31.51 33.18 71.77 26.08 40.45 87.21 38.03 83.22 60.86 83.58 53.58 65.64 70.24 38.25 39.99 16 E3a_E4a KnownJunction 0 14.37 34.93 35.72 43.68 43.38 46.68 12.94 22.30 32.52 39.57 79.07 43.81 36.20 93.18 27.81 93.99 50.77 92.57 41.79 80.47 87.54 42.19 36.36 17 ER4a ExonRegion 0 16.63 34.66 29.73 38.08 20.11 48.41 9.12 17.68 27.31 30.07 84.96 22.14 40.12 104.81 41.13 82.13 101.18 93.00 68.68 65.70 92.18 32.87 40.44 18 E4a_E5a KnownJunction 0 6.22 8.81 11.21 9.32 4.33 22.37 12.45 11.05 12.12 9.67 32.75 0.00 23.38 53.51 4.45 28.88 17.20 46.39 24.38 15.02 34.60 5.63 42.85 19 E4a_E5b KnownJunction 0 10.52 30.26 22.38 25.11 8.06 23.23 11.61 8.75 18.06 21.79 65.70 6.30 20.13 49.50 19.53 43.07 52.36 82.24 42.35 69.09 58.38 21.92 15.11 20 ER5a ExonRegion 0 6.24 4.78 11.09 15.65 5.64 34.45 14.42 12.47 9.35 11.96 44.51 22.35 12.55 47.89 18.19 33.98 44.52 44.20 33.58 21.62 40.50 14.42 31.67 21 E5_Ab KnownBoundary 0 6.52 5.92 12.27 23.07 7.64 66.84 18.64 14.83 11.69 17.46 48.43 37.81 6.82 35.96 34.74 39.39 68.54 35.53 38.02 24.35 42.87 20.27 23.30 22 ER5b ExonRegion 0 15.91 22.79 27.81 48.98 15.97 38.15 12.01 28.24 25.23 44.82 108.26 35.41 49.73 101.63 44.09 79.92 132.66 97.31 52.29 80.91 100.06 34.62 52.07 23 E5a_E6a KnownJunction 1 13.56 27.23 34.77 55.24 16.89 47.59 10.95 20.41 32.52 56.03 107.40 7.50 63.31 119.25 17.80 78.44 122.67 98.37 24.75 62.64 92.54 25.35 61.12 24 ER6a ExonRegion 0 29.43 37.46 42.28 51.94 22.53 76.20 19.98 25.46 30.19 48.53 121.82 28.79 62.87 147.18 65.98 96.67 170.31 122.58 104.26 99.11 96.49 50.51 80.36 25 E6a_E7a KnownJunction 0 21.34 27.36 42.99 46.18 30.05 72.97 34.67 26.62 26.79 40.45 97.97 79.98 93.99 110.19 66.88 92.45 125.29 126.93 124.62 78.55 89.95 48.86 50.02 26 I6 Intron 0 8.58 14.85 5.74 10.92 8.14 9.11 9.80 4.70 7.65 7.45 10.78 4.80 9.73 10.16 7.11 7.23 10.38 7.84 14.86 13.59 10.05 11.62 5.06 27 I6_SR1 SilentIntronRegion 0 8.61 14.90 5.76 10.96 8.17 9.15 9.84 4.72 7.68 7.48 10.82 4.82 9.77 10.20 7.14 7.26 10.42 7.87 14.92 13.64 10.09 11.67 5.08 28 E7_Aa NovelBoundary 0 25.34 31.31 19.81 31.20 35.57 13.29 10.29 16.76 11.23 21.33 7.42 0.00 12.82 26.31 18.42 7.26 13.46 14.05 50.26 20.26 16.12 21.37 15.45 29 ER7a ExonRegion 0 25.27 46.03 29.31 33.85 24.43 51.71 25.61 29.04 23.92 35.57 99.33 54.81 56.89 94.75 37.41 88.74 114.25 107.06 57.94 68.41 78.76 45.54 56.90 30 E7a_E8a KnownJunction 0 21.34 41.37 30.10 34.59 31.41 67.52 23.89 22.47 23.99 34.03 102.50 32.41 26.78 98.24 35.11 64.00 120.90 67.90 84.24 73.76 50.41 39.99 76.57 31 ER8a ExonRegion 0 27.90 58.78 22.62 27.33 30.96 82.17 19.73 22.40 29.77 30.29 91.80 48.96 53.74 118.71 47.69 81.82 113.63 81.33 71.82 63.19 83.55 55.76 64.59 32 E8a_E9a KnownJunction 0 53.34 59.66 38.17 44.98 22.41 110.79 20.71 50.44 41.03 52.30 146.09 43.66 60.71 109.54 50.68 80.92 98.08 106.74 67.86 86.86 118.06 48.01 93.64 33 ER9a ExonRegion 0 35.09 47.82 33.78 53.49 38.86 91.35 29.75 35.04 39.80 47.85 143.19 62.12 42.30 136.32 55.87 99.25 129.70 119.65 94.60 87.10 118.82 71.28 77.75 34 E9a_E10a KnownJunction 0 47.34 58.34 41.63 53.51 52.97 62.35 25.57 24.40 32.81 50.85 101.18 42.46 25.65 131.97 46.36 63.23 99.21 115.32 77.56 73.76 49.42 64.42 66.07 35 ER10a ExonRegion 0 36.68 50.86 40.44 46.09 31.77 72.25 26.01 33.34 35.55 47.26 103.30 49.12 33.27 97.49 46.15 80.69 111.09 102.37 69.58 66.71 83.67 59.34 62.66 36 E10a_E11a KnownJunction 0 46.60 66.37 56.09 95.89 30.14 92.45 26.45 32.94 59.49 63.05 158.30 23.71 33.93 146.57 68.36 100.23 148.95 146.50 93.65 91.98 73.95 91.48 85.02 37 ER11a ExonRegion 0 35.50 84.05 56.52 82.00 19.74 110.97 30.75 35.04 53.91 69.54 153.99 30.11 37.31 164.65 68.71 112.27 169.65 137.21 86.58 82.08 99.00 72.70 98.51 38 E11a_E12a KnownJunction 0 35.04 82.22 49.14 66.33 26.66 83.47 32.42 55.78 45.72 63.10 133.61 43.66 55.03 129.97 53.65 71.09 156.52 117.23 87.63 80.47 105.15 92.83 83.23 39 ER12a ExonRegion 0 32.73 60.88 56.96 64.11 27.36 109.89 24.76 43.86 40.16 64.38 157.72 44.92 62.26 121.50 42.76 114.39 161.66 137.38 105.63 89.33 98.53 77.32 70.52 40 E12a_E13a KnownJunction 0 39.04 88.14 68.92 55.50 50.17 119.70 32.28 38.45 35.30 73.23 189.57 44.86 46.26 106.54 53.53 149.36 159.42 158.72 128.47 128.92 104.28 82.54 91.17 41 ER13a ExonRegion 0 29.63 47.77 64.24 64.00 34.84 104.99 18.59 37.70 40.00 61.13 166.15 38.78 51.59 118.11 56.73 110.92 135.97 174.79 109.93 94.43 110.47 62.82 97.41 42 E13a_E14a KnownJunction 0 46.30 43.87 59.10 76.08 20.63 100.68 18.59 42.63 44.65 48.03 149.25 48.02 48.05 149.45 75.78 123.56 106.59 144.09 90.54 76.06 129.73 68.28 113.02 43 ER14a ExonRegion 0 34.84 63.27 64.52 72.84 13.60 77.23 21.55 34.88 53.25 60.22 164.99 43.51 76.66 159.88 65.02 105.49 130.47 131.89 96.34 89.22 140.71 64.73 110.53 44 E14a_E15a KnownJunction 1 72.38 63.87 65.34 91.53 23.68 86.88 35.55 47.60 57.41 74.43 207.26 18.61 104.38 146.39 78.13 112.36 156.43 154.12 142.69 102.20 187.93 74.64 125.74 45 ER15a ExonRegion 0 56.46 57.73 61.27 74.76 19.60 82.96 19.40 41.03 48.18 53.05 172.03 44.70 71.48 142.83 56.27 110.27 117.85 171.71 103.86 93.48 135.94 60.30 83.30 46 E15a_E16a KnownJunction 0 46.45 84.66 59.87 83.54 39.39 130.95 12.54 46.29 43.34 54.93 151.41 42.76 79.70 152.04 58.10 101.68 142.40 178.58 89.51 114.09 112.43 72.26 98.51 47 ER16a ExonRegion 1 61.08 83.98 58.39 75.12 36.36 125.37 26.42 37.85 50.54 59.77 162.06 29.09 118.65 140.24 83.51 115.30 149.34 159.27 113.63 95.01 109.65 66.38 75.64 48 E16a_E17a KnownJunction 1 36.01 78.67 77.11 113.24 35.40 180.24 60.33 77.47 67.27 79.35 163.62 18.46 142.69 181.53 71.95 134.67 125.76 171.20 94.59 125.34 122.88 74.03 102.78 49 ER17a ExonRegion 0 35.88 55.61 73.62 102.41 25.92 107.60 27.22 57.29 67.92 85.94 181.44 73.81 158.52 196.95 79.43 198.15 187.83 258.52 139.05 123.18 116.69 106.66 113.04 50 E17_Da NovelBoundary 0 13.85 13.22 17.06 41.69 3.65 20.56 0.00 20.41 23.06 8.92 42.80 0.00 29.22 33.96 19.28 60.07 38.90 42.95 16.57 40.72 32.43 29.09 33.72 51 E17a_E18a KnownJunction 1 37.27 48.35 97.75 126.42 23.17 84.50 18.81 75.00 90.68 101.83 213.63 53.12 228.23 243.10 124.36 252.67 213.00 299.38 176.66 89.04 124.73 129.57 103.03 52 I17 Intron 0 13.24 8.81 6.59 17.10 5.15 24.26 3.19 10.53 4.43 6.99 27.43 7.05 24.89 23.24 11.08 29.31 28.59 28.97 30.65 33.27 20.68 24.56 30.39 53 I17_SR1 SilentIntronRegion 0 13.36 8.89 6.65 17.26 5.20 24.49 3.22 10.63 4.47 7.06 27.70 7.11 25.13 23.46 11.19 29.58 28.86 29.25 30.94 33.59 20.87 24.79 30.67 54 E18_Aa NovelBoundary 0 6.89 2.43 13.04 17.11 3.57 5.62 4.20 22.88 8.16 19.13 45.06 11.70 23.05 22.13 35.97 60.50 35.16 59.53 55.15 41.80 37.13 31.17 68.03 55 ER18a ExonRegion 0 59.50 49.14 66.20 96.37 24.58 118.49 20.52 66.55 74.21 96.00 336.66 69.11 210.88 188.30 112.89 186.09 302.65 237.51 183.48 154.68 187.26 100.03 120.81 56 E18a_E19a KnownJunction 0 33.27 44.86 58.90 77.75 34.13 66.78 5.56 59.76 49.39 70.54 260.54 70.07 191.71 154.04 87.52 99.20 253.11 167.72 75.01 123.17 172.61 74.52 42.85 57 ER19a ExonRegion 0 56.09 69.75 73.04 85.57 26.89 103.19 25.55 62.08 59.50 81.09 193.53 73.13 147.09 180.27 97.63 157.67 209.38 191.24 140.13 113.09 159.44 87.98 104.60 58 E19a_E20a KnownJunction 0 70.53 61.63 95.00 108.28 36.84 118.00 31.22 60.87 65.51 55.26 127.87 31.21 98.53 197.01 97.04 141.24 159.89 222.52 161.98 97.54 135.11 50.03 91.00 59 ER20a ExonRegion 0 30.62 40.21 68.26 60.90 15.33 73.37 18.45 32.02 40.44 48.64 106.04 18.84 64.90 127.85 51.04 80.01 104.63 110.15 63.12 74.51 98.54 43.94 65.21 60 E20a_E21a KnownJunction 0 29.41 53.74 46.42 57.40 21.48 89.15 32.11 38.61 34.66 45.50 105.66 12.45 19.80 101.18 39.93 66.31 114.91 137.25 43.58 103.61 125.47 44.15 33.38 61 ER21a ExonRegion 0 34.36 37.68 61.53 59.38 10.77 78.24 17.97 32.18 33.89 50.95 127.26 20.12 40.18 115.83 70.71 72.04 104.59 96.66 81.31 84.31 109.73 48.28 59.73 62 E21_Da NovelBoundary 0 13.85 8.88 7.24 24.47 0.00 7.04 16.25 3.57 6.94 6.93 14.06 0.00 0.00 2.47 0.00 12.65 12.81 10.16 3.86 25.18 5.25 6.25 8.71 63 E21a_E22a KnownJunction 0 85.27 66.24 80.81 83.01 23.51 120.73 32.19 68.02 65.91 73.49 166.83 43.51 73.05 151.51 97.66 148.76 123.52 197.28 148.33 111.22 116.39 76.36 89.89 64 I21_AR1 ActiveIntronRegion 0 7.21 6.36 5.35 20.41 9.28 8.97 8.40 4.70 5.04 6.39 6.32 4.18 2.15 5.07 3.04 8.00 9.94 9.03 8.46 8.08 4.47 7.46 6.62 65 I21_AR3 ActiveIntronRegion 0 10.65 5.70 14.23 26.07 4.50 2.06 2.97 1.41 1.03 1.90 4.31 0.00 4.33 3.64 4.56 0.00 9.25 2.58 7.14 7.11 7.29 4.67 3.29 66 E22_Aa NovelBoundary 0 33.64 6.71 30.96 61.63 11.71 13.80 8.17 13.64 2.98 15.02 14.69 0.00 20.94 2.24 4.45 8.20 9.54 21.51 25.41 15.02 14.09 3.12 4.35 67 ER22a ExonRegion 0 77.36 62.64 132.14 156.61 38.25 113.70 23.90 59.36 52.35 73.02 170.97 27.35 60.89 134.54 98.98 132.20 158.79 209.99 108.30 106.60 124.11 69.37 85.27 68 E22a_E23a KnownJunction 1 71.42 57.95 90.86 120.10 41.00 83.25 7.86 37.34 44.42 67.18 120.77 0.00 21.10 120.96 135.11 87.33 158.20 145.54 65.32 106.29 109.16 50.58 65.05 69 I22_SR1 SilentIntronRegion 0 9.14 8.73 6.44 11.61 10.56 7.19 3.73 4.27 2.04 4.26 7.97 5.58 15.86 9.58 4.72 8.61 11.17 8.55 9.32 8.08 3.04 3.57 4.40 70 I22_AR1 ActiveIntronRegion 0 15.80 12.64 5.13 12.31 9.98 11.52 6.55 7.06 4.08 4.08 10.85 3.38 8.65 9.86 5.36 13.32 12.44 10.56 7.36 7.57 4.34 3.88 4.40 71 I22_SR2 SilentIntronRegion 0 16.22 8.99 4.85 17.03 5.63 13.12 5.39 3.17 1.23 5.02 8.42 1.38 4.96 9.99 5.53 11.22 6.95 11.29 16.36 10.61 5.92 3.72 6.59 72 ER23a ExonRegion 0 66.72 63.63 117.19 116.75 39.06 109.39 25.53 40.06 34.81 46.20 133.37 18.90 39.19 104.44 115.53 102.52 119.23 137.51 101.49 94.47 96.32 43.54 66.25 73 E23a_E24a KnownJunction 0 138.69 96.30 135.06 168.74 43.55 173.71 44.16 38.03 36.26 54.42 165.88 37.51 54.05 152.69 114.72 130.73 142.31 155.74 118.87 100.41 112.31 31.60 72.64 74 ER24a ExonRegion 0 136.05 76.48 124.89 170.17 34.53 108.60 33.62 57.28 43.27 53.22 166.78 16.65 40.97 154.08 145.68 128.37 145.14 157.26 113.41 99.17 118.90 54.03 74.78 75 E24a_E25a KnownJunction 1 176.92 112.35 171.46 200.71 42.61 86.14 30.21 71.76 55.27 72.93 168.10 0.00 12.99 141.21 119.17 151.84 123.33 138.04 93.93 113.90 141.41 58.91 71.79 76 ER25a ExonRegion 0 141.15 133.48 124.76 164.26 68.31 116.19 36.61 59.99 38.90 57.08 124.19 21.39 34.32 110.45 116.00 98.93 118.34 108.97 81.75 69.70 68.76 48.29 62.03 77 IG39 Intergenic 0 10.36 19.66 20.93 27.90 15.24 27.48 9.29 7.46 5.43 8.77 6.13 2.14 5.03 6.58 6.61 6.39 9.40 13.86 13.13 12.59 5.12 5.62 7.92 78 IG39_SR3 SilentIntergenicRegion 0 8.75 11.67 16.91 20.07 18.83 33.55 5.98 8.07 5.24 8.05 3.67 0.00 2.67 7.52 7.18 7.53 10.28 15.21 11.89 12.93 5.97 3.26 11.39 79 IG39_AR2 ActiveIntergenicRegion 0 11.53 12.87 16.19 19.30 11.42 27.62 9.22 5.85 3.34 8.74 4.99 0.42 3.70 6.28 4.36 3.45 11.67 14.46 11.16 7.58 6.75 3.31 6.27 80 IG39_SR2 SilentIntergenicRegion 0 9.10 12.50 22.82 25.94 12.81 22.27 7.69 6.49 3.83 8.92 4.16 1.01 5.87 6.21 8.05 7.14 5.35 14.90 14.54 12.84 5.52 5.37 6.18 81 IG39_AR1 ActiveIntergenicRegion 0 12.57 39.29 29.54 46.67 20.76 31.05 14.35 10.70 9.70 10.85 11.03 6.21 6.73 7.32 7.26 8.28 11.53 14.43 15.64 17.81 3.81 9.46 9.74