Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PKNOX2 Gene 0 13.19 40.50 45.78 36.27 5.01 28.27 4.40 9.05 13.31 6.26 0.08 0.05 0.00 0.04 0.00 0.00 0.18 20.77 3.66 21.27 0.90 25.16 15.46 2 298282 Transcript 0 5.68 12.55 28.45 21.05 2.49 26.15 3.18 8.80 10.52 6.95 0.01 0.00 0.00 0.00 0.00 0.00 0.55 20.91 4.86 18.92 1.41 25.05 19.73 3 ER1a ExonRegion 0 3.27 3.89 5.34 4.05 0.75 17.39 2.02 1.61 1.02 0.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.62 3.33 8.45 0.68 3.60 7.99 4 E1a_E2a KnownJunction 0 16.30 26.57 23.89 17.85 7.89 81.26 13.65 6.86 7.09 2.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29.97 13.08 31.51 2.90 36.19 64.62 5 E1a_E3a NovelJunction 0 3.78 0.00 1.83 3.40 0.00 5.34 0.00 0.00 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.21 0.00 5.82 0.00 8.57 11.78 6 I1_AR1 ActiveIntronRegion 0 0.00 1.69 14.44 2.73 0.00 3.27 1.54 1.56 2.35 0.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.61 0.76 3.95 0.00 2.38 0.00 7 I1_SR2 SilentIntronRegion 0 0.46 2.61 14.85 2.74 0.62 3.10 0.55 0.14 1.24 0.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.82 2.00 4.87 0.24 0.65 0.95 8 I1_AR2 ActiveIntronRegion 0 0.33 3.14 14.34 3.08 0.71 1.01 0.69 0.48 0.63 0.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.93 0.00 1.20 0.21 0.80 1.93 9 I1_SR3 SilentIntronRegion 0 0.65 1.44 14.06 4.22 0.00 0.00 0.52 0.34 0.48 0.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.67 0.00 2.49 0.57 0.27 1.53 10 ER2a ExonRegion 0 3.88 18.39 20.50 15.41 2.64 35.49 5.31 5.06 7.41 9.61 0.00 0.00 0.00 0.00 0.00 0.00 0.70 23.68 3.95 23.70 0.50 23.51 36.85 11 E2a_E3a KnownJunction 0 0.00 0.00 11.27 5.89 0.00 2.16 0.00 8.54 1.24 11.28 0.00 0.00 0.00 0.00 0.00 0.00 4.30 5.14 0.00 3.00 0.00 3.12 4.35 12 ER3a ExonRegion 0 0.00 1.10 21.51 11.62 0.00 0.75 0.45 11.02 3.31 6.28 0.00 0.00 0.00 0.00 0.00 0.00 1.67 13.83 7.47 11.61 1.05 15.21 9.28 13 E3a_E4a KnownJunction 0 0.00 0.00 26.23 28.97 0.00 0.00 4.11 13.43 5.70 7.47 0.00 0.00 0.00 0.00 0.00 0.00 4.30 32.62 18.64 23.59 0.00 45.68 36.45 14 ER4a ExonRegion 0 0.31 5.07 17.87 13.88 0.00 18.66 1.48 6.44 2.20 5.19 0.00 0.00 0.00 0.00 0.00 0.00 1.00 23.61 3.01 17.27 0.00 14.83 32.68 15 E4a_E5a KnownJunction 0 3.41 3.29 7.69 6.89 0.00 15.22 0.00 11.87 1.27 5.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.11 4.71 5.75 0.00 7.47 0.00 16 ER5a ExonRegion 0 5.05 9.18 6.65 6.93 0.00 21.25 3.32 3.95 6.41 3.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.39 1.16 14.59 1.61 11.61 3.67 17 E5a_E6a KnownJunction 0 17.48 9.47 13.31 10.95 0.00 14.88 4.24 2.34 7.23 4.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.18 0.00 12.59 0.00 20.08 11.01 18 ER6a ExonRegion 0 5.97 10.19 16.81 15.47 1.59 17.45 1.97 3.77 13.76 5.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25.39 1.43 20.89 1.47 26.43 8.13 19 E6a_E7a KnownJunction 0 3.70 16.31 16.29 21.38 0.00 10.45 0.00 2.55 17.42 14.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22.14 4.80 14.25 2.72 24.98 4.35 20 ER7a ExonRegion 0 5.32 11.92 28.67 24.79 5.73 27.85 1.09 6.14 17.07 10.71 0.00 0.00 0.00 0.00 0.00 0.00 1.78 22.16 3.05 26.50 2.23 37.71 18.16 21 E7a_E8a KnownJunction 0 14.30 15.00 40.03 30.27 0.00 27.48 0.00 4.35 23.58 9.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29.10 9.60 14.51 0.00 57.44 4.35 22 ER8a ExonRegion 0 6.35 14.02 35.49 20.09 2.10 37.68 2.53 8.84 12.32 12.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22.05 1.54 29.43 0.86 35.88 25.30 23 E8a_E9a KnownJunction 0 3.41 9.21 37.88 27.64 0.00 32.20 7.99 9.45 16.64 7.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31.42 3.95 26.27 0.00 28.72 30.39 24 ER9a ExonRegion 0 4.10 9.79 38.75 21.14 4.81 30.97 8.89 11.78 11.57 5.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28.70 3.87 23.12 2.29 35.36 25.92 25 E9a_E10a KnownJunction 0 0.00 15.85 37.85 17.21 4.33 29.53 6.93 20.41 8.94 5.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.61 4.80 10.99 0.00 30.25 30.22 26 ER10a ExonRegion 0 3.23 13.68 43.45 32.02 3.17 31.19 0.66 12.88 14.58 6.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28.30 6.66 22.41 4.04 37.54 25.52 27 E10a_E11a KnownJunction 0 6.08 17.89 60.61 40.79 15.03 35.38 0.00 27.44 14.87 4.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.66 7.53 34.32 7.91 17.39 31.93 28 I10_AR2 ActiveIntronRegion 0 2.35 13.31 16.46 16.22 2.97 3.05 0.40 0.00 2.31 0.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.95 0.00 4.55 1.44 29 I10_AR3 ActiveIntronRegion 0 5.05 17.69 11.84 11.43 5.93 2.82 3.39 0.44 1.26 0.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.41 0.54 3.99 0.00 1.78 1.00 30 ER11a ExonRegion 0 9.24 11.62 37.95 28.43 5.00 37.25 0.26 12.59 14.20 4.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18.57 3.43 23.24 2.58 18.67 24.68 31 E11a_E12a KnownJunction 0 3.11 12.70 40.74 28.57 0.00 31.74 2.03 5.09 17.10 10.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25.33 3.76 9.40 0.00 25.66 22.11 32 ER12a ExonRegion 0 2.27 11.10 40.81 31.82 2.29 33.96 7.06 8.96 12.70 8.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22.03 3.06 26.66 1.75 22.99 17.83 33 E12a_E13a KnownJunction 0 5.78 6.31 22.53 16.35 0.00 33.56 0.00 4.52 10.01 5.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.15 4.80 17.45 2.35 20.33 3.93 34 ER13a ExonRegion 0 19.36 61.18 59.07 47.77 6.81 30.12 5.40 10.14 15.32 5.86 0.13 0.08 0.00 0.06 0.00 0.00 0.00 20.91 3.90 21.39 0.41 25.64 13.60