Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TMEM218 Gene 0 42.49 60.83 47.14 44.60 29.44 76.84 23.91 15.35 11.80 19.11 41.10 12.33 24.09 47.87 55.32 37.90 35.73 36.58 35.05 38.28 28.20 20.73 24.02 2 279968 Transcript 1 42.60 32.44 41.64 39.04 19.62 82.02 19.83 18.32 8.42 18.63 64.38 3.15 7.28 38.68 60.40 77.73 70.99 53.98 52.21 32.69 47.19 21.42 49.06 3 455225 Transcript 0 9.74 9.14 18.19 14.72 5.85 19.98 7.69 4.94 4.58 7.07 14.44 4.71 5.74 7.67 8.09 9.82 17.55 11.82 12.21 14.06 8.17 4.46 3.05 4 IG51 Intergenic 0 4.80 5.76 3.10 4.60 4.55 19.74 3.00 2.92 2.09 1.94 4.38 0.00 0.00 1.41 2.80 0.00 3.74 11.97 10.83 4.82 2.50 2.36 4.99 5 IG51_AR1 ActiveIntergenicRegion 0 4.91 5.89 3.17 4.71 4.65 20.17 3.07 2.99 2.13 1.98 4.48 0.00 0.00 1.44 2.87 0.00 3.83 12.24 11.08 4.93 2.55 2.41 5.11 6 ER1a ExonRegion 1 95.47 58.51 48.39 37.51 29.01 164.21 36.28 18.09 6.60 20.46 73.79 0.00 7.94 64.73 92.80 85.32 94.05 65.26 52.49 48.00 69.90 33.48 79.02 7 E1_Da NovelBoundary 0 7.56 0.00 1.42 7.69 3.65 10.96 6.54 2.30 0.00 2.66 7.42 0.00 8.12 2.47 0.00 0.00 0.00 20.27 3.95 2.56 0.00 0.00 4.35 8 E1a_E2b KnownJunction 1 66.60 27.30 77.88 52.64 36.25 85.63 6.76 29.74 18.00 33.20 75.55 0.00 6.33 26.31 81.96 126.21 101.26 89.12 43.30 30.74 59.37 19.53 43.96 9 I1_AR3 ActiveIntronRegion 0 3.87 5.27 9.84 7.51 2.31 9.17 5.30 6.30 1.30 3.77 17.72 1.98 10.49 6.91 3.44 6.65 9.34 8.21 7.83 17.45 0.00 0.00 2.24 10 E2_Aa NovelBoundary 0 176.18 191.22 1348.03 1851.31 203.06 181.60 440.52 1500.27 1373.77 1444.02 77.28 19.96 21.75 20.37 47.35 205.76 207.85 2427.18 179.58 288.39 139.25 62.03 232.19 11 ER2a ExonRegion 0 3.15 9.21 7.17 7.87 0.87 15.30 4.51 2.75 2.65 2.59 6.45 2.17 3.89 4.51 1.62 5.38 5.23 7.18 2.34 8.25 2.30 1.72 5.72 12 E2_Ab KnownBoundary 0 27.93 19.54 8.16 8.76 0.00 7.55 6.27 2.09 0.00 2.79 0.00 6.75 6.82 4.77 0.00 0.00 0.00 0.00 0.00 20.45 2.78 8.63 3.84 13 ER2b ExonRegion 0 23.76 27.17 57.56 39.38 12.59 36.65 12.50 21.62 15.53 19.77 62.65 16.16 18.82 27.26 39.22 45.97 63.11 53.14 23.10 31.49 50.89 8.89 17.62 14 E2_Da KnownBoundary 0 3.78 30.32 39.95 29.40 3.82 35.15 10.82 12.77 12.82 18.86 43.80 6.30 18.99 22.01 4.45 19.74 35.06 30.59 21.65 30.42 63.94 5.94 8.45 15 E2a_E3a KnownJunction 0 17.34 2.76 36.96 23.01 4.33 5.11 8.39 8.87 6.77 9.19 29.22 6.30 0.00 12.18 18.91 16.41 35.90 18.32 21.46 11.82 19.40 5.69 0.00 16 ER2c ExonRegion 1 5.21 23.04 30.68 35.88 13.24 61.54 16.80 16.30 7.87 14.85 91.72 6.61 8.51 54.25 33.59 59.47 84.43 40.02 74.84 39.81 54.12 26.44 58.49 17 E2_Db NovelBoundary 0 7.26 23.88 28.15 20.84 12.65 32.25 6.40 15.94 7.44 4.49 7.53 12.75 19.32 9.71 14.34 44.09 15.90 17.95 25.98 32.60 14.09 6.12 3.50 18 E2b_E3a KnownJunction 1 3.11 20.92 9.61 30.13 0.00 16.69 19.48 9.16 1.22 5.99 16.48 6.00 6.33 9.42 33.25 39.90 4.21 21.51 38.21 12.21 5.37 6.25 14.77 19 E2b_E4a NovelJunction 0 0.00 0.00 0.00 0.00 3.48 0.00 0.00 4.48 0.00 0.00 0.00 0.00 6.82 0.00 8.90 4.36 3.93 1.74 0.00 0.00 0.00 2.45 25.69 20 I2 Intron 0 32.82 28.29 14.30 18.50 15.83 41.63 8.68 8.24 7.36 7.65 18.54 9.81 12.79 39.90 16.40 34.70 25.32 18.22 18.82 20.42 15.13 12.66 20.66 21 I2_AR1 ActiveIntronRegion 0 33.03 28.47 14.39 18.62 15.93 41.89 8.73 8.29 7.40 7.70 18.66 9.87 12.86 40.15 16.50 34.92 25.48 18.32 18.93 20.55 15.22 12.74 20.77 22 E3_Aa NovelBoundary 1 59.20 35.91 22.80 20.64 12.90 74.79 7.86 4.19 9.11 21.30 31.22 12.30 15.10 52.39 9.64 43.75 36.00 29.10 11.86 15.15 32.31 17.64 8.71 23 ER3a ExonRegion 1 23.79 47.50 51.49 44.87 18.97 96.92 26.49 20.08 14.87 20.48 47.83 8.71 6.53 82.64 99.13 58.53 54.86 56.12 41.72 44.84 46.56 25.36 20.89 24 E3_Da NovelBoundary 0 3.41 17.56 14.81 14.65 19.78 28.96 8.92 2.42 1.39 10.13 12.37 0.00 0.00 23.43 0.00 4.27 27.49 9.29 13.65 11.44 11.49 3.12 8.54 25 E3a_E4a KnownJunction 0 35.27 77.09 53.66 71.32 33.87 299.32 39.70 37.34 19.36 24.79 16.48 18.91 26.95 110.31 93.08 31.44 41.70 73.87 51.67 49.54 60.54 32.88 23.05 26 I3 Intron 0 41.07 34.95 18.11 24.02 21.59 32.87 9.13 10.47 7.14 6.53 19.29 9.21 15.23 20.99 13.22 11.90 17.89 8.67 6.87 13.89 7.33 6.42 9.59 27 I3_SR1 SilentIntronRegion 0 30.19 28.07 14.15 22.10 22.27 33.43 9.19 9.92 5.43 5.00 17.24 8.68 11.88 18.58 10.95 7.75 14.49 5.54 3.93 12.58 6.11 4.79 9.27 28 I3_AR1 ActiveIntronRegion 0 55.85 46.88 24.84 29.96 21.48 29.85 9.50 12.02 9.61 9.18 21.99 10.01 19.26 23.70 16.07 17.96 20.88 12.32 9.35 15.44 8.96 8.70 9.79 29 I3_SR2 SilentIntronRegion 1 81.37 51.52 27.50 18.47 35.68 75.59 10.00 11.52 12.35 10.70 34.15 17.32 21.89 43.13 29.01 29.06 46.21 23.20 28.31 23.40 17.63 15.51 17.62 30 I3_AR2 ActiveIntronRegion 0 82.02 43.21 25.73 15.84 31.44 66.02 9.27 9.29 11.42 10.18 34.55 17.32 31.66 45.27 31.91 26.75 44.56 23.79 28.67 21.28 14.32 14.32 17.62 31 I3_AR3 ActiveIntronRegion 0 50.05 26.68 13.80 6.13 8.58 33.49 5.72 5.90 8.25 3.95 18.93 6.37 23.31 21.73 13.23 11.45 27.18 14.46 16.40 15.77 6.74 5.94 8.98 32 E4_Aa NovelBoundary 0 69.94 33.02 23.86 27.57 21.05 62.12 40.01 6.82 6.92 17.49 27.43 31.96 47.24 48.86 21.51 25.98 27.30 8.17 0.00 14.51 16.74 21.19 7.51 33 ER4a ExonRegion 0 104.24 101.56 108.14 97.29 52.53 187.83 49.33 32.09 22.18 54.72 90.19 30.68 40.94 133.41 147.99 109.16 74.38 74.74 82.85 87.67 72.19 55.43 70.48 34 E4_Da NovelBoundary 1 0.00 0.00 1.12 1.43 0.00 0.00 3.97 0.00 1.74 5.05 0.00 0.00 18.34 4.47 9.77 12.65 8.88 1.62 8.19 2.56 0.00 6.12 0.00 35 E4a_E5a KnownJunction 0 213.59 157.54 137.31 113.71 58.57 165.08 35.11 40.33 30.12 68.18 85.44 29.71 67.37 114.84 193.96 86.13 88.92 80.83 55.72 77.85 81.73 79.48 91.85 36 ER5a ExonRegion 0 97.31 144.16 98.15 92.65 68.60 128.30 46.19 29.91 23.16 34.07 72.22 25.42 55.02 91.76 112.99 61.54 50.95 64.02 62.49 64.27 46.04 39.74 38.27 37 E5_Da KnownBoundary 0 93.28 32.30 20.40 26.87 51.36 53.66 17.18 12.16 11.14 19.66 25.80 6.30 13.31 2.24 21.26 11.02 8.60 10.53 4.05 17.96 0.00 2.33 0.00 38 ER5b ExonRegion 0 8.74 15.44 10.44 13.28 12.36 39.52 10.16 3.19 4.31 9.44 7.66 5.67 13.33 6.33 3.72 7.67 11.52 9.95 12.84 22.10 2.80 5.97 3.45