Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CHEK1 Gene 0 34.76 130.69 61.99 49.91 39.72 38.94 58.96 28.69 17.71 43.49 227.94 89.93 89.72 184.29 106.71 131.61 172.72 101.53 44.31 132.31 23.04 50.81 28.86 2 438015 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 427383 Transcript 0 0.00 3.29 1.51 3.76 0.00 0.00 1.85 0.00 1.13 1.29 4.95 0.00 0.00 10.18 10.38 0.00 12.81 10.78 0.00 5.94 0.00 0.00 0.00 4 428830 Transcript 0 16.58 42.11 22.43 14.94 13.84 9.72 15.13 11.43 8.24 12.46 50.51 22.81 19.64 41.96 57.53 26.88 35.67 32.22 19.22 41.04 6.36 9.96 14.02 5 278916 Transcript 0 1.36 0.98 2.35 0.00 0.02 1.18 2.34 1.22 0.89 1.37 5.58 0.57 0.62 4.09 1.37 2.86 10.05 6.94 3.58 4.09 16.96 12.95 7.07 6 IG6 Intergenic 0 9.84 17.04 17.60 32.43 12.44 14.44 9.21 14.74 13.73 8.97 5.07 9.91 8.04 5.12 10.46 7.05 6.16 7.51 8.96 19.38 5.09 18.91 8.91 7 IG6_AR1 ActiveIntergenicRegion 0 22.13 26.49 17.69 43.29 26.57 26.22 16.28 16.71 17.83 10.26 9.51 13.25 21.93 9.40 20.18 7.25 7.33 4.85 10.00 24.51 10.32 32.99 11.85 8 IG6_SR2 SilentIntergenicRegion 0 13.36 24.01 26.70 51.84 20.55 25.77 13.87 21.02 22.80 13.28 8.19 15.26 10.49 6.55 13.57 10.25 11.11 11.81 14.69 29.12 8.10 29.91 17.58 9 IG6_AR2 ActiveIntergenicRegion 0 11.91 25.25 27.92 49.10 12.64 12.85 8.37 25.73 19.68 13.01 4.81 10.60 7.26 5.90 12.93 4.50 4.88 6.52 8.52 24.71 5.81 28.21 4.62 10 ER1a ExonRegion 0 7.13 15.91 16.90 19.22 5.39 7.96 6.16 4.69 6.92 5.32 20.54 4.84 5.14 18.10 19.45 13.83 18.01 13.70 12.24 19.70 5.40 8.22 3.62 11 E1a_E3a KnownJunction 1 161.81 442.82 44.82 47.55 103.57 128.96 248.15 18.07 8.30 45.37 924.81 0.00 81.65 534.52 280.24 581.30 758.02 351.23 119.06 440.96 11.37 55.84 38.33 12 E2_Aa NovelBoundary 0 7.56 10.06 4.67 0.00 0.00 10.33 6.36 7.15 3.07 2.69 8.95 0.00 0.00 4.83 0.00 11.71 16.55 14.63 0.00 5.37 13.90 5.69 11.35 13 ER2a ExonRegion 0 2.72 1.96 4.71 0.00 0.03 2.35 4.67 2.44 1.77 2.74 11.16 1.14 1.24 8.18 2.74 5.72 12.25 9.61 7.15 8.19 25.57 17.51 14.15 14 E2_Da NovelBoundary 0 7.56 26.44 13.84 0.00 12.82 9.94 3.75 1.77 10.50 6.12 4.63 6.30 6.82 9.65 0.00 10.77 9.54 9.12 14.02 54.90 34.60 5.63 29.71 15 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.85 4.27 0.00 0.00 8.34 8.39 0.00 16 ER3a ExonRegion 1 37.92 135.01 30.40 34.01 26.03 39.52 71.73 13.85 7.02 37.07 282.79 10.85 35.04 129.24 66.63 133.92 253.82 54.69 33.13 167.68 37.18 49.44 29.19 17 E3a_E4a KnownJunction 0 6.30 20.00 22.91 12.19 3.99 12.61 17.84 6.94 9.37 7.79 101.03 31.06 25.97 54.15 18.30 24.44 58.16 33.20 22.97 63.41 35.83 49.84 15.02 18 E3a_E5a KnownJunction 0 0.00 3.29 1.51 3.76 0.00 0.00 1.85 0.00 1.13 1.29 4.95 0.00 0.00 10.18 10.38 0.00 12.81 10.78 0.00 5.94 0.00 0.00 0.00 19 ER4a ExonRegion 0 11.63 67.91 45.86 36.37 26.57 27.61 57.41 23.22 20.63 50.54 408.80 91.58 96.06 218.59 90.57 205.34 279.09 145.51 56.43 184.85 30.41 67.13 41.05 20 E4a_E5a KnownJunction 0 20.97 240.42 63.72 45.48 59.17 84.72 160.13 35.12 21.79 61.89 341.09 141.20 143.33 191.65 52.04 170.90 245.07 85.15 58.64 154.81 34.41 75.38 40.29 21 ER5a ExonRegion 0 21.85 239.09 62.93 46.00 16.42 49.29 69.52 31.14 17.84 69.11 402.34 144.47 129.88 266.31 92.48 149.20 308.66 103.62 36.90 198.98 27.97 70.97 35.65 22 E5a_E6a KnownJunction 0 54.60 225.49 58.63 55.37 19.10 39.30 49.90 21.40 13.57 78.54 395.21 163.25 150.15 228.09 121.64 142.27 353.72 96.50 51.30 218.79 14.39 83.46 42.00 23 ER6a ExonRegion 0 51.52 202.89 78.46 71.32 45.07 39.27 58.03 39.71 20.01 75.06 445.89 199.96 161.61 286.12 143.82 229.11 328.86 148.37 72.35 198.75 25.91 87.95 33.06 24 E6a_E7a KnownJunction 0 44.30 244.89 104.61 90.93 75.64 47.19 115.00 53.19 27.52 88.24 521.71 285.54 280.50 313.32 140.06 325.73 315.38 210.71 101.18 212.08 37.38 83.71 48.23 25 ER7a ExonRegion 0 54.46 276.96 108.09 71.20 70.31 50.41 102.50 50.22 29.24 68.19 474.42 222.22 178.15 354.11 161.27 282.93 355.06 194.89 72.91 241.37 29.50 92.62 51.88 26 E7a_E8a KnownJunction 0 75.49 442.62 106.00 83.04 35.40 38.90 80.07 49.66 20.78 85.02 442.95 112.09 201.77 340.28 217.20 248.99 360.17 213.03 101.74 227.99 37.13 67.85 32.10 27 ER8a ExonRegion 0 52.55 355.90 99.40 63.48 85.17 74.21 106.99 44.30 20.22 71.88 396.63 177.01 174.56 394.38 205.33 254.70 327.89 173.60 60.07 243.77 32.57 92.29 43.41 28 E8a_E9a KnownJunction 0 60.53 299.88 86.51 57.17 103.90 90.80 134.25 69.21 22.42 80.69 371.62 212.62 168.01 401.14 241.55 231.05 360.64 198.77 53.74 192.39 40.34 59.89 61.46 29 E8a_E10a NovelJunction 0 0.00 22.23 4.55 6.26 0.00 0.00 0.00 0.00 0.00 0.00 16.64 0.00 0.00 2.24 0.00 0.00 0.00 4.39 4.71 2.62 0.00 0.00 0.00 30 I8 Intron 0 3.11 11.12 5.65 4.81 4.64 2.79 9.40 4.33 3.58 3.86 6.40 9.57 17.13 5.19 2.76 4.84 10.93 4.07 4.19 26.85 0.23 2.52 2.01 31 I8_AR2 ActiveIntronRegion 0 4.49 14.20 11.04 8.22 8.62 6.34 12.87 7.54 7.60 5.97 12.41 14.94 22.51 8.38 3.38 7.90 24.23 8.09 8.58 40.51 0.56 3.54 3.04 32 E9_Aa NovelBoundary 0 10.08 16.51 15.32 15.82 10.61 11.13 11.04 6.20 4.54 8.35 14.48 20.11 13.47 12.54 0.00 7.52 9.35 6.09 0.00 68.77 0.00 0.00 4.01 33 ER9a ExonRegion 0 51.81 217.25 101.67 62.31 81.36 73.26 112.22 60.89 26.17 89.96 474.51 155.55 197.52 494.65 220.86 360.87 381.36 261.15 102.03 235.70 44.72 117.13 65.00 34 E9_Da NovelBoundary 0 0.00 20.26 5.94 6.59 0.00 0.00 10.11 10.15 1.56 9.75 14.58 12.60 11.85 4.59 4.45 0.00 13.28 5.14 3.58 52.86 0.00 5.69 0.00 35 E9a_E10a KnownJunction 0 57.49 257.59 86.10 87.47 94.74 82.57 128.29 56.44 36.89 89.88 519.24 120.64 139.44 542.24 285.56 330.17 512.58 276.95 112.47 253.69 52.82 115.30 29.62 36 E10_Aa NovelBoundary 0 21.63 59.66 26.49 48.01 0.00 19.42 20.98 16.27 12.24 6.53 7.42 0.00 0.00 0.00 8.90 8.03 17.58 19.90 8.94 40.27 3.15 3.12 0.00 37 ER10a ExonRegion 0 61.40 266.40 124.34 101.08 57.61 69.62 108.38 74.09 27.16 96.10 502.32 143.11 176.80 410.25 195.56 338.11 446.95 268.99 97.26 254.81 63.79 111.36 64.07 38 E10a_E11a KnownJunction 0 127.95 466.04 156.62 99.85 118.59 97.33 168.57 70.73 26.01 88.24 551.03 182.61 272.71 397.55 175.29 417.92 485.18 294.53 84.14 301.18 80.80 123.39 85.79 39 ER11a ExonRegion 0 81.40 332.23 116.45 104.70 91.05 84.57 133.65 57.38 28.16 75.53 476.54 166.81 177.98 428.01 214.90 311.74 375.43 288.48 110.16 235.40 64.66 93.64 55.33 40 E11a_E12a KnownJunction 0 75.72 346.39 108.98 75.22 81.66 89.72 107.93 48.59 21.96 63.13 335.93 105.33 167.20 389.19 235.74 222.08 254.51 161.63 69.37 202.75 36.45 68.34 44.22 41 ER12a ExonRegion 0 74.01 234.28 93.62 77.41 83.68 76.71 99.76 45.06 25.87 68.68 322.12 167.41 132.53 302.34 203.75 166.60 222.29 144.05 71.50 213.59 30.68 61.01 41.27 42 E12_Da NovelBoundary 0 0.00 5.85 9.05 7.49 20.37 0.00 8.04 0.00 4.86 2.90 2.68 7.65 0.00 0.00 0.00 3.50 8.88 4.56 17.79 26.78 0.00 0.00 0.00 43 E12a_E13a KnownJunction 0 60.90 220.82 120.93 94.46 116.55 49.06 89.96 47.52 34.52 72.93 360.04 194.91 166.87 353.35 363.93 207.98 161.66 147.08 90.26 267.56 21.93 78.93 67.86 44 ER13a ExonRegion 0 87.19 240.12 115.62 106.40 112.75 71.00 132.40 61.36 43.65 78.68 421.96 186.72 154.17 402.48 241.34 231.97 293.10 171.32 63.27 246.20 31.15 92.33 61.76 45 E13a_E14a KnownJunction 0 105.72 125.37 128.91 103.55 70.80 85.01 156.20 52.21 33.80 65.52 355.62 101.28 78.57 324.80 197.91 191.06 263.58 179.33 34.07 230.61 43.06 85.48 75.55 46 E14_Aa NovelBoundary 0 0.00 2.76 12.24 0.00 0.00 0.00 0.00 0.00 1.65 1.67 0.00 6.30 13.31 0.00 11.50 0.00 4.68 1.95 18.26 21.41 0.00 0.00 0.00 47 ER14a ExonRegion 0 64.55 228.92 116.77 84.78 66.37 79.87 96.30 53.08 31.05 87.25 313.44 168.29 131.32 293.27 226.98 162.72 274.70 158.26 58.61 220.43 37.12 78.60 44.03 48 E14_Da KnownBoundary 0 59.49 202.40 99.11 68.69 85.82 58.32 100.82 38.61 23.78 59.47 265.12 188.31 175.64 305.43 140.43 125.01 270.41 86.35 21.84 175.96 27.43 63.81 24.58 49 E14a_E15a KnownJunction 0 2.96 30.65 14.84 13.52 7.72 0.00 3.93 7.39 3.27 5.67 36.85 11.85 0.00 28.31 32.88 6.49 17.39 11.86 4.80 6.14 0.00 2.88 0.00 50 ER14b ExonRegion 0 41.35 130.92 98.70 82.89 54.23 56.67 82.61 37.80 22.70 60.85 208.08 120.27 143.35 174.75 116.94 103.35 123.81 66.57 36.13 145.90 11.06 61.26 19.77 51 E14_Db NovelBoundary 0 24.00 118.20 69.57 92.96 49.49 24.36 67.26 31.01 30.01 40.62 105.87 109.39 138.14 77.46 48.09 32.13 37.59 47.05 31.81 82.01 0.00 48.07 14.08 52 I14 Intron 0 16.73 66.93 29.70 26.61 17.24 16.44 28.08 13.14 8.54 17.75 26.72 30.54 33.87 24.96 26.46 16.77 15.32 14.85 13.57 52.11 2.12 16.38 4.94 53 I14_AR1 ActiveIntronRegion 0 32.35 125.30 52.82 48.37 30.19 28.61 53.30 22.50 13.03 31.89 55.85 64.25 72.61 53.50 55.68 30.37 28.49 20.97 20.38 81.40 4.55 36.48 9.30 54 I14_SR2 SilentIntronRegion 0 4.99 22.67 12.58 10.12 7.64 6.91 8.72 6.17 5.40 7.16 4.49 4.54 4.02 3.02 4.02 6.67 5.53 10.75 8.73 31.10 0.25 0.87 1.56 55 Ix Intron 0 3.60 11.66 9.76 8.13 4.39 10.24 4.98 4.92 6.05 6.79 4.39 1.64 4.25 2.05 4.18 5.86 5.32 6.24 11.32 35.77 0.20 0.50 0.61 56 Ix_SR1 SilentIntronRegion 0 3.90 12.72 10.57 8.22 4.66 9.81 5.26 5.22 6.15 7.39 4.27 1.69 4.60 1.98 4.21 5.74 4.96 5.88 11.13 37.40 0.23 0.50 0.60 57 E15_Aa NovelBoundary 0 21.34 25.65 7.10 21.48 3.48 44.07 35.37 16.10 15.34 22.13 16.16 12.90 7.30 4.83 8.90 7.69 8.88 7.83 16.66 31.64 0.00 5.20 3.76 58 ER15a ExonRegion 0 30.20 53.57 30.02 16.37 19.95 19.43 26.33 15.46 13.22 19.26 64.17 33.77 39.28 55.61 82.18 47.27 53.96 52.59 33.63 75.94 12.72 17.05 28.03