Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ACRV1 Gene 0 7.75 33.95 29.07 14.88 4.44 32.52 6.63 13.80 25.04 23.98 5.66 2.68 2.63 7.69 5.20 8.71 10.82 26.35 32.91 65.37 0.34 0.56 0.68 2 257382 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 453509 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 348856 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.66 0.00 0.00 0.00 0.00 5 315608 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 345274 Transcript 0 0.00 5.59 5.50 0.00 0.00 10.79 0.00 4.03 1.79 1.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.60 0.00 0.00 0.00 0.00 7 433875 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 445562 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 353070 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 425431 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 426183 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 IG7_AR2 ActiveIntergenicRegion 0 1.38 4.36 2.39 2.65 1.21 1.99 2.55 1.85 0.54 0.82 1.24 0.00 0.97 0.79 0.23 1.93 0.64 7.68 4.75 26.24 0.00 0.00 0.00 13 IG7_SR1 SilentIntergenicRegion 0 0.98 6.30 5.17 2.60 1.33 4.37 1.59 1.77 3.74 3.39 0.44 0.47 1.12 0.82 0.73 0.82 1.16 8.51 6.18 22.74 0.00 0.11 0.06 14 ER1a ExonRegion 0 6.45 14.97 8.88 9.13 3.42 9.99 5.51 5.78 3.02 13.69 6.79 4.10 0.00 7.47 8.49 11.40 6.33 18.52 9.18 21.16 0.00 1.00 0.94 15 E1_Da NovelBoundary 0 7.04 21.64 18.04 18.48 10.53 11.02 4.50 4.35 11.31 27.40 9.58 7.65 0.00 13.07 21.01 14.95 4.30 31.92 13.27 38.54 0.00 3.12 0.00 16 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 I1 Intron 0 4.95 24.26 16.44 12.49 9.87 7.13 7.33 9.25 6.80 12.49 7.89 5.19 6.88 5.72 4.64 7.46 8.77 13.16 7.68 36.38 0.49 0.72 0.58 18 I1_AR1 ActiveIntronRegion 0 8.41 37.27 23.13 19.47 13.08 6.91 10.08 13.05 6.05 13.35 9.00 7.37 7.22 7.78 5.92 9.93 10.02 20.76 10.28 40.17 0.28 0.79 0.80 19 I1_SR1 SilentIntronRegion 0 2.72 15.92 12.16 8.01 7.82 7.28 5.56 6.82 7.29 11.95 7.19 3.79 6.66 4.39 3.83 5.87 7.98 8.27 6.01 33.99 0.62 0.68 0.44 20 E2_Aa NovelBoundary 0 0.00 5.99 11.29 11.29 8.66 2.90 3.49 7.52 12.53 20.63 0.00 0.00 6.82 5.18 0.00 4.10 3.55 16.83 0.00 61.30 3.15 0.00 0.00 21 ER2a ExonRegion 0 6.75 27.88 35.29 19.16 4.19 18.44 4.68 9.97 18.49 19.81 3.78 2.20 1.50 5.77 4.54 5.43 9.47 28.89 33.88 50.08 0.00 0.00 0.00 22 E2_Da KnownBoundary 0 10.74 65.05 53.81 33.73 3.57 40.20 14.93 17.87 32.06 41.13 7.53 0.00 6.82 12.48 0.00 11.36 17.30 49.37 56.19 58.42 0.00 0.00 0.00 23 E2a_E2b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.76 0.00 0.00 0.00 0.00 24 E2a_E2c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 E2a_E2d KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 ER2b ExonRegion 0 6.21 49.53 37.31 20.98 3.27 42.50 9.62 19.58 30.81 33.96 4.49 1.12 2.60 11.56 3.50 9.51 10.26 42.38 45.25 87.03 0.00 0.00 0.00 29 E2_Ab KnownBoundary 0 0.00 43.87 26.29 12.29 7.98 51.90 5.74 13.88 19.91 25.87 7.00 0.00 6.82 12.66 6.30 3.25 0.00 52.48 24.38 90.25 0.00 0.00 0.00 30 ER2c ExonRegion 0 5.13 37.24 23.91 15.54 7.67 63.04 1.24 13.02 14.44 27.55 3.31 0.10 5.11 6.53 2.19 5.09 11.81 46.28 28.46 80.14 0.00 0.00 0.00 31 E2_Ac KnownBoundary 0 10.30 31.18 18.04 16.12 12.31 77.40 0.00 9.94 6.57 17.22 4.95 0.00 7.47 7.24 0.00 8.37 21.88 28.02 29.55 88.27 0.00 0.00 0.00 32 E2_Db KnownBoundary 0 0.00 39.27 19.43 5.86 16.30 46.85 4.24 14.01 23.61 20.66 2.42 0.00 0.00 18.95 4.45 11.45 18.14 26.32 24.00 65.58 2.53 0.00 0.00 33 E2b_E2e KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.66 0.00 0.00 0.00 0.00 34 ER2d ExonRegion 0 6.42 34.85 26.66 15.09 13.38 57.80 2.47 17.52 24.02 28.04 5.00 0.00 2.26 10.86 4.80 14.45 21.17 32.11 30.97 81.29 0.76 0.00 0.00 35 ER2e ExonRegion 0 7.32 42.88 26.93 7.26 9.19 38.91 5.76 20.89 36.19 31.76 6.34 0.00 0.00 15.08 2.21 11.89 10.19 36.59 27.28 83.90 1.96 0.00 2.94 36 E2_Ad KnownBoundary 0 14.22 60.98 22.89 5.03 12.14 47.93 10.07 15.61 33.82 31.59 4.37 0.00 0.00 12.42 4.45 11.88 8.88 55.63 33.13 83.67 0.00 0.00 3.16 37 ER2f ExonRegion 0 12.53 49.03 38.54 11.48 8.15 46.42 11.68 13.56 31.16 33.03 3.43 0.15 2.48 7.92 4.34 5.78 9.75 53.23 44.74 94.96 1.68 1.19 0.33 38 E2c_E2e NovelJunction 0 3.26 52.49 36.69 10.72 0.00 39.86 4.42 24.52 27.63 23.42 0.00 0.00 0.00 11.65 4.33 0.00 17.48 41.20 48.85 101.24 2.97 0.00 0.00 39 E2_Ae KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40 E2_Dc KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41 E2c_E3a KnownJunction 0 3.78 0.00 4.61 0.00 0.00 2.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.26 0.00 0.00 0.00 42 ER2g ExonRegion 0 4.23 50.84 37.99 9.54 2.68 51.35 7.94 19.01 28.41 25.23 1.93 4.33 9.38 9.74 2.90 5.94 16.50 42.50 47.78 110.64 2.20 0.00 2.94 43 ER2h ExonRegion 0 0.45 33.55 29.12 7.96 0.10 56.59 7.66 16.95 23.36 17.45 4.35 2.94 6.95 8.00 2.43 7.43 12.97 23.59 34.13 69.38 1.30 0.00 2.36 44 E2_Dd NovelBoundary 0 3.63 24.40 11.18 7.16 3.90 20.27 10.42 6.57 11.46 16.98 5.37 0.00 0.00 7.42 0.00 6.32 0.00 35.28 4.80 56.06 0.00 0.00 3.84 45 E2d_E3a KnownJunction 0 0.00 8.35 18.10 4.96 0.00 34.87 0.00 2.55 18.66 14.02 2.37 0.00 0.00 2.41 0.00 0.00 0.00 6.67 21.46 17.26 0.00 0.00 0.00 46 E2d_E4a KnownJunction 0 0.00 5.59 5.50 0.00 0.00 10.79 0.00 4.03 1.79 1.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.60 0.00 0.00 0.00 0.00 47 I2 Intron 0 2.64 16.45 18.70 9.84 4.14 19.06 7.21 4.89 14.25 10.42 2.41 2.33 6.61 3.99 2.52 4.01 5.61 9.05 10.50 45.17 0.22 0.21 0.15 48 I2_SR1 SilentIntronRegion 0 2.65 16.54 18.81 9.90 4.17 19.12 7.25 4.92 14.33 10.48 2.42 2.34 6.65 4.01 2.54 4.03 5.64 9.10 10.56 45.41 0.22 0.21 0.15 49 E3_Aa NovelBoundary 0 7.11 15.06 31.46 14.28 12.22 16.69 2.16 9.69 27.63 24.74 0.00 0.00 0.00 4.47 5.19 7.52 4.49 12.73 13.65 43.02 0.00 0.00 0.00 50 ER3a ExonRegion 0 9.65 32.49 41.61 15.87 2.21 40.77 7.84 12.55 36.16 26.21 2.13 3.36 4.46 6.40 2.10 1.31 5.64 17.72 37.83 65.89 0.00 0.89 0.00 51 E3_Da NovelBoundary 0 3.19 5.85 13.19 16.48 0.00 2.84 8.48 5.38 7.26 9.67 7.63 6.75 7.30 7.89 0.00 0.00 4.58 11.48 0.00 50.88 0.00 0.00 0.00 52 E3a_E4a KnownJunction 0 0.00 20.65 32.55 10.82 0.00 33.05 0.00 8.26 41.61 17.03 2.47 0.00 6.82 3.00 0.00 0.00 0.00 4.31 39.06 11.25 0.00 0.00 0.00 53 I3 Intron 0 2.06 6.91 3.55 4.93 1.30 10.69 1.93 2.50 3.58 0.83 1.88 1.73 0.00 4.50 0.99 1.44 3.21 11.16 9.28 26.87 0.00 0.00 0.00 54 I3_SR1 SilentIntronRegion 0 2.12 7.12 3.65 5.08 1.34 10.86 1.99 2.58 3.68 0.85 1.93 1.78 0.00 4.60 1.02 1.49 3.30 11.49 9.56 27.60 0.00 0.00 0.00 55 Ix Intron 0 3.60 11.66 9.76 8.13 4.39 10.24 4.98 4.92 6.05 6.79 4.39 1.64 4.25 2.05 4.18 5.86 5.32 6.24 11.32 35.77 0.20 0.50 0.61 56 Ix_SR1 SilentIntronRegion 0 3.90 12.72 10.57 8.22 4.66 9.81 5.26 5.22 6.15 7.39 4.27 1.69 4.60 1.98 4.21 5.74 4.96 5.88 11.13 37.40 0.23 0.50 0.60 57 E4_Aa NovelBoundary 0 9.71 35.78 23.48 14.92 0.00 22.37 14.13 2.05 16.26 29.49 14.11 0.00 6.82 0.00 14.09 0.00 25.62 28.52 37.55 97.86 0.00 0.00 0.00 58 ER4a ExonRegion 0 9.52 39.52 36.09 18.57 4.67 33.84 5.98 17.60 37.39 25.47 7.64 3.43 3.89 5.86 5.64 9.51 15.75 18.27 44.00 82.65 0.29 0.55 0.78