Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TMEM136 Gene 0 19.94 61.62 35.50 60.77 23.49 47.95 19.14 18.78 15.40 29.46 19.37 14.45 19.00 21.60 22.59 26.16 16.90 52.68 33.02 55.79 25.08 34.22 23.36 2 375095 Transcript 0 11.03 30.00 22.05 32.47 10.19 29.75 9.81 11.15 8.12 19.00 14.07 6.07 11.62 16.62 15.99 20.86 11.58 45.01 17.57 38.01 20.48 19.38 18.94 3 314475 Transcript 0 3.12 5.43 5.88 9.62 5.21 6.19 3.65 5.52 3.21 6.90 5.72 6.30 8.28 6.62 5.14 7.72 7.22 9.07 4.48 12.64 10.16 10.07 7.53 4 ER1a ExonRegion 0 0.00 0.05 0.00 0.00 0.00 2.48 0.01 0.00 0.52 0.00 0.82 0.00 0.00 0.04 0.45 0.02 0.07 2.35 0.91 0.00 1.37 0.09 0.08 5 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 10.73 0.00 0.00 0.00 0.00 2.68 0.00 0.00 0.00 4.45 0.00 0.00 0.00 9.60 0.00 2.78 2.94 0.00 6 ER1b ExonRegion 1 13.46 7.80 2.39 0.76 0.00 18.43 4.73 0.06 0.00 1.52 11.41 2.98 0.15 13.79 31.11 15.88 12.55 8.78 20.78 6.52 15.10 27.87 25.27 7 E1a_E2a KnownJunction 0 3.70 0.00 1.77 0.00 0.00 2.73 0.00 0.00 0.00 3.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.75 2.90 4.96 0.00 8 E1a_E2b KnownJunction 0 10.15 2.96 3.67 2.00 0.00 7.38 2.25 0.00 0.00 4.73 2.32 0.00 0.00 2.47 0.00 25.29 4.21 17.58 0.00 9.78 0.00 4.65 15.45 9 I1 Intron 0 2.91 7.93 5.33 17.64 5.00 16.77 5.86 6.08 5.07 6.72 7.60 6.01 12.75 9.78 3.31 11.20 8.98 13.35 7.83 16.53 11.05 10.99 13.57 10 I1_SR1 SilentIntronRegion 0 2.94 7.99 5.37 17.78 5.04 16.90 5.90 6.13 5.11 6.78 7.66 6.06 12.85 9.86 3.33 11.29 9.05 13.45 7.89 16.66 11.13 11.08 13.68 11 E2_Aa NovelBoundary 0 23.04 12.50 3.02 18.08 23.60 29.64 16.96 9.20 8.68 15.98 22.53 6.15 13.64 11.65 0.00 22.47 17.20 14.38 9.32 32.34 29.47 18.68 7.00 12 ER2a ExonRegion 0 5.67 16.29 10.33 26.82 15.63 15.83 10.94 14.46 9.63 16.07 12.79 18.90 11.21 14.90 9.74 18.81 13.91 20.20 13.43 32.16 10.77 22.69 18.84 13 E2_Ab KnownBoundary 0 18.00 20.19 14.28 29.00 22.16 17.83 5.70 14.17 16.72 20.82 23.27 0.00 19.80 6.83 21.01 14.61 17.39 45.81 19.77 29.15 37.56 7.84 34.49 14 ER2b ExonRegion 0 13.17 20.15 19.84 41.87 10.42 20.76 8.12 16.78 12.73 21.15 34.88 16.01 11.93 29.27 41.14 47.43 28.95 68.89 37.14 42.91 40.38 47.44 45.82 15 E2_Da NovelBoundary 0 0.00 3.35 0.00 10.75 24.96 19.82 4.37 4.27 1.27 3.65 9.90 0.00 0.00 2.47 9.02 0.00 0.00 1.78 0.00 17.26 3.03 3.12 0.00 16 E2a_E3a KnownJunction 0 14.60 16.51 35.21 44.58 8.23 24.13 9.63 25.18 13.86 32.29 46.27 18.31 26.78 29.02 21.63 73.31 32.26 107.57 38.50 30.04 49.98 35.03 76.57 17 I2_AR1 ActiveIntronRegion 0 2.50 7.68 0.65 11.22 3.41 7.00 2.94 1.82 0.65 3.83 3.19 1.68 6.14 1.96 2.40 2.02 3.90 3.04 2.26 6.03 1.04 8.80 3.36 18 E3_Aa NovelBoundary 0 3.78 2.43 2.84 8.26 3.90 5.22 3.89 4.31 1.10 11.28 2.21 0.00 6.33 6.95 0.00 3.76 12.53 12.56 0.00 6.33 5.68 0.00 15.54 19 ER3a ExonRegion 0 18.00 29.36 24.99 43.18 4.55 48.73 11.37 23.46 12.01 26.46 51.50 15.18 22.94 27.48 44.11 38.52 32.92 94.21 23.43 45.56 61.52 31.68 40.63 20 E3_Da KnownBoundary 0 16.67 56.31 18.57 47.05 3.48 55.42 8.04 15.12 15.62 27.48 18.85 6.90 32.47 26.08 22.50 18.71 16.83 71.01 25.98 56.57 41.82 32.51 24.24 21 E3a_E3b KnownJunction 0 0.00 0.00 5.53 2.03 0.00 0.00 0.00 2.09 0.00 1.37 4.37 0.00 13.64 4.94 5.69 4.36 7.76 7.01 0.00 0.00 16.80 2.57 3.76 22 ER3b ExonRegion 0 9.01 38.26 44.24 58.26 11.41 54.48 14.01 24.87 15.03 39.18 36.71 8.70 26.45 45.28 45.51 32.76 27.18 113.30 32.42 83.16 61.48 38.26 39.51 23 E3_Ab KnownBoundary 0 13.56 60.25 42.61 66.96 22.92 33.96 17.22 24.93 16.87 39.59 24.43 6.00 14.12 40.97 49.94 32.04 26.46 107.53 27.20 62.64 60.73 28.04 42.51 24 ER3c ExonRegion 0 14.26 42.92 46.81 80.14 17.37 60.39 18.78 22.52 22.73 36.40 33.38 14.68 29.51 42.83 57.43 37.14 30.90 104.53 37.24 72.95 64.21 57.51 32.20 25 E3_Db KnownBoundary 0 7.11 40.85 27.44 80.98 53.99 99.83 24.33 14.70 20.49 29.33 26.22 18.31 13.64 22.49 10.01 26.49 12.34 70.89 44.24 87.57 29.22 35.94 50.71 26 ER3d ExonRegion 0 24.95 78.74 40.30 69.61 29.36 54.65 22.96 19.74 16.93 32.11 16.43 15.60 20.01 18.69 18.00 25.38 14.86 46.82 36.93 59.11 19.07 34.53 20.72 27 IG20_AR3 ActiveIntergenicRegion 0 2.36 6.80 6.82 5.94 3.17 16.17 9.04 7.90 22.10 20.36 70.96 11.68 29.31 151.00 19.87 71.80 72.43 59.28 19.09 53.38 123.13 95.85 100.51