Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PCSK7 Gene 0 189.67 52.64 133.45 125.93 72.45 96.88 40.59 85.56 72.72 95.83 307.67 34.33 97.02 360.46 239.15 324.97 194.37 170.27 72.36 105.63 135.52 89.69 79.86 2 320934 Transcript 0 126.85 39.02 106.00 105.43 54.39 89.60 34.41 68.29 64.35 85.89 305.15 38.27 98.62 346.05 225.20 313.50 191.55 164.20 77.69 102.79 139.28 79.68 83.57 3 IG4_AR1 ActiveIntergenicRegion 0 0.27 0.26 3.92 3.19 1.73 2.61 0.69 1.33 3.80 3.54 9.13 0.00 3.46 7.22 5.17 10.30 8.81 19.22 12.37 7.73 7.13 1.62 9.48 4 ER1a ExonRegion 0 19.82 4.39 1.95 0.22 7.64 26.05 10.92 1.18 3.90 2.76 35.32 2.45 0.00 43.62 77.37 57.81 44.97 11.70 7.11 7.52 21.30 14.71 7.32 5 E1a_E2a KnownJunction 1 41.34 15.52 16.50 13.75 12.31 28.22 21.90 9.41 16.81 16.76 80.13 0.00 5.84 49.80 112.12 82.80 94.25 28.19 30.21 15.40 39.78 36.86 15.37 6 ER2a ExonRegion 0 39.19 6.90 25.17 23.21 13.80 27.54 13.42 30.72 27.76 34.49 159.24 10.25 29.39 122.65 62.35 94.46 111.38 59.25 29.01 44.75 57.09 24.05 26.89 7 E2a_E3a KnownJunction 1 19.41 12.83 50.00 37.56 0.00 8.40 0.00 46.66 53.36 52.33 321.29 32.11 15.10 143.21 70.59 80.66 201.96 58.57 17.88 58.48 113.55 14.76 7.17 8 ER3a ExonRegion 0 37.06 12.70 51.42 51.09 16.14 40.34 16.93 45.06 40.61 64.03 232.43 16.04 59.29 274.80 181.87 236.12 154.63 130.15 48.21 77.65 112.02 52.58 55.62 9 E3a_E4a KnownJunction 0 68.68 9.34 83.38 77.05 23.85 52.81 14.40 60.95 60.59 97.00 258.80 19.06 81.00 337.57 215.34 302.74 127.26 110.43 49.32 83.80 116.57 61.54 63.94 10 ER4a ExonRegion 0 51.53 16.62 82.97 67.50 39.30 48.45 22.05 47.97 67.33 90.52 272.90 31.08 90.08 349.22 210.12 288.43 144.29 159.43 57.76 90.95 135.39 48.26 83.07 11 E4a_E5a KnownJunction 0 63.64 47.95 124.69 92.73 40.83 82.45 37.36 96.52 78.30 95.87 320.34 42.46 100.48 459.48 276.66 404.42 149.42 222.56 125.27 91.79 179.46 84.69 107.13 12 ER5a ExonRegion 0 65.03 22.08 85.60 71.63 36.86 47.72 21.74 52.72 60.39 82.07 279.29 31.48 94.34 390.49 218.52 294.83 190.44 165.71 82.82 110.00 139.87 70.71 95.26 13 E5a_E6a KnownJunction 0 79.72 2.96 85.75 57.83 87.18 65.19 26.50 66.05 67.77 68.39 315.76 45.31 114.93 333.92 222.51 300.43 231.32 183.27 88.66 108.79 133.01 87.81 101.24 14 E5a_E7a NovelJunction 0 11.04 0.00 3.55 10.62 4.33 2.50 2.25 1.77 7.32 1.21 4.63 0.00 0.00 4.94 6.30 0.00 0.00 1.53 0.00 8.56 11.86 8.82 8.11 15 ER6a ExonRegion 0 82.20 29.50 89.71 83.50 57.28 72.99 24.84 59.19 59.67 76.75 322.96 44.44 122.15 430.16 232.16 368.90 238.86 168.39 89.86 129.11 124.91 86.07 94.75 16 E6_Da NovelBoundary 0 30.60 6.38 13.54 17.85 4.33 2.84 19.65 19.72 17.62 14.24 4.79 6.15 19.80 14.30 16.81 30.25 4.30 32.38 32.38 18.66 2.66 11.76 8.28 17 E6a_E7a KnownJunction 1 146.32 30.85 87.96 89.77 56.79 121.07 50.39 55.57 65.13 87.19 357.67 74.87 106.65 408.80 204.46 342.99 226.27 185.13 119.63 120.80 140.17 96.01 150.07 18 E7_Aa NovelBoundary 0 12.97 3.09 21.44 4.63 30.14 5.22 6.18 2.30 16.55 8.84 0.00 5.40 0.00 6.89 22.25 3.85 12.81 14.26 22.31 6.52 8.65 6.25 3.50 19 ER7a ExonRegion 0 80.54 22.52 82.37 73.45 31.62 73.15 29.92 47.42 55.94 75.40 363.67 56.13 104.89 376.56 226.30 312.67 235.92 168.04 79.87 117.37 148.45 81.41 91.89 20 E7a_E8a KnownJunction 0 91.65 25.72 96.39 85.27 67.91 87.90 31.89 49.66 52.37 77.42 417.21 79.08 114.44 367.30 248.84 317.27 275.83 186.13 78.21 130.71 186.01 60.87 81.69 21 ER8a ExonRegion 0 82.03 35.79 93.90 99.91 65.70 108.15 29.24 66.00 64.78 90.37 365.85 39.84 122.04 369.96 250.82 336.49 249.28 163.41 60.48 138.92 161.35 101.97 92.45 22 E8_Da NovelBoundary 1 26.67 17.83 32.46 86.70 36.59 39.41 20.67 28.30 33.82 29.44 58.65 13.95 87.17 111.54 48.09 149.62 57.88 68.98 29.65 55.35 27.24 32.82 50.28 23 E8a_E9a KnownJunction 0 32.52 37.30 96.89 42.88 33.96 118.68 26.94 49.33 51.04 62.32 331.03 17.86 65.90 378.78 242.91 318.12 185.88 157.32 72.28 113.58 147.46 74.58 90.57 24 I8 Intron 0 43.41 6.27 22.04 55.11 28.17 23.80 12.25 20.80 28.90 19.08 71.22 19.83 67.83 75.67 39.00 98.99 44.63 54.69 32.95 33.60 31.59 34.21 30.91 25 I8_AR1 ActiveIntronRegion 0 42.61 5.72 21.14 60.53 28.30 23.72 11.58 21.33 27.76 18.67 79.38 19.46 75.07 81.97 43.29 107.95 45.52 58.59 39.29 35.71 32.62 35.92 30.89 26 I8_SR1 SilentIntronRegion 0 44.98 2.03 39.06 87.14 20.24 18.91 12.25 31.87 33.19 31.90 61.61 27.60 52.47 72.88 29.19 65.39 66.02 54.74 22.30 36.57 35.81 29.17 23.86 27 I8_AR2 ActiveIntronRegion 0 45.37 7.87 22.61 41.70 28.94 24.64 13.79 18.95 31.18 18.98 56.12 20.11 55.09 63.82 31.49 84.66 41.35 47.27 21.22 29.36 29.45 31.56 31.92 28 E9_Aa NovelBoundary 0 43.34 3.35 16.14 46.81 17.15 37.99 3.40 22.80 27.37 21.14 18.32 0.00 27.76 73.93 9.27 60.16 43.01 33.58 29.27 18.09 14.58 9.37 15.19 29 ER9a ExonRegion 0 88.52 28.73 110.38 113.94 61.44 109.45 39.59 59.97 73.52 89.88 429.79 43.47 98.96 458.58 256.43 352.21 242.89 185.67 72.06 130.14 184.15 104.20 126.45 30 E9a_E10a KnownJunction 0 124.39 40.85 135.48 151.20 84.89 121.63 61.03 61.12 72.34 118.76 446.53 36.76 182.94 530.99 394.34 433.22 266.11 231.52 72.28 133.91 177.05 130.61 110.72 31 ER10a ExonRegion 0 82.82 38.35 107.69 119.78 51.25 91.05 28.33 69.66 65.33 92.65 317.40 48.11 106.36 384.43 244.38 304.40 202.85 172.05 73.34 112.16 155.26 81.53 80.20 32 E10a_E11a KnownJunction 1 143.06 47.29 124.15 129.49 57.47 77.68 37.94 65.47 62.38 103.93 293.34 64.67 131.00 393.32 199.77 331.54 179.15 164.40 64.00 95.56 158.27 66.81 78.11 33 ER11a ExonRegion 0 86.48 29.79 124.51 108.11 47.57 114.46 37.28 60.54 60.93 73.49 313.27 41.61 123.42 357.79 241.50 295.48 182.56 176.41 71.76 102.28 158.24 86.02 96.28 34 E11a_E12a KnownJunction 0 110.54 26.38 168.33 127.36 62.39 121.41 41.12 97.26 69.96 91.68 399.57 54.02 120.45 381.19 292.85 421.26 194.02 219.79 86.03 91.53 141.16 101.40 102.27 35 E12_Aa NovelBoundary 0 2.67 0.00 15.37 17.08 31.58 0.00 13.78 9.28 5.70 4.57 14.69 6.30 6.17 28.72 0.00 59.98 34.13 28.85 9.60 18.34 9.14 10.16 3.33 36 ER12a ExonRegion 0 72.00 20.85 113.33 105.52 30.63 87.01 27.91 61.77 56.19 77.14 287.21 27.03 149.85 365.99 225.03 330.43 169.11 140.88 90.12 92.77 147.84 79.13 75.73 37 E12_Da NovelBoundary 0 10.82 2.89 11.65 22.87 7.47 5.11 5.83 16.68 18.95 16.71 11.32 18.61 15.75 41.14 29.67 45.89 17.11 29.39 16.66 27.23 11.31 9.98 8.02 38 E12a_E13a KnownJunction 0 70.23 35.85 89.53 105.81 33.11 93.47 24.42 35.20 48.78 50.07 264.54 49.52 107.30 345.28 211.39 258.56 145.58 113.38 62.21 68.46 128.62 45.13 71.71 39 E12a_E14a NovelJunction 0 7.41 9.14 8.19 1.40 3.82 6.81 0.00 0.00 6.05 0.00 4.74 0.00 0.00 12.66 0.00 7.60 12.81 11.61 0.00 3.07 0.00 10.35 0.00 40 I12 Intron 1 128.31 60.08 57.91 73.65 72.11 40.30 36.36 50.76 43.63 51.18 57.47 29.21 81.66 103.95 61.63 125.49 61.89 77.40 42.89 65.43 29.66 26.66 29.22 41 I12_SR1 SilentIntronRegion 1 42.62 30.32 25.79 37.18 46.20 21.58 18.70 29.64 23.11 26.82 35.88 16.79 32.54 71.09 41.78 73.86 47.50 33.63 29.98 43.40 16.71 11.44 16.90 42 I12_AR2 ActiveIntronRegion 0 142.18 46.49 64.60 84.92 67.08 43.61 30.62 71.17 56.15 65.97 65.71 21.83 53.38 116.04 66.47 160.53 79.44 123.26 70.05 83.64 45.99 36.83 44.90 43 I12_AR3 ActiveIntronRegion 0 148.81 78.62 71.04 98.47 67.02 44.42 42.01 64.82 52.83 68.24 63.45 29.24 102.52 117.46 68.92 154.14 74.77 101.33 48.31 87.51 33.43 25.78 33.59 44 I12_SR2 SilentIntronRegion 0 141.02 40.08 18.61 22.08 58.19 27.43 21.61 14.01 21.24 26.72 27.60 24.59 57.59 82.83 54.78 101.01 38.11 41.83 30.32 27.52 19.45 17.00 15.98 45 I12_AR7 ActiveIntronRegion 1 203.95 126.22 92.93 121.08 115.95 57.40 63.70 74.03 57.81 68.59 75.73 58.16 149.81 142.05 90.71 173.70 76.97 84.22 50.87 84.49 30.02 39.26 37.83 46 I12_SR3 SilentIntronRegion 0 103.60 36.88 43.07 44.74 75.24 36.89 30.95 31.20 28.29 32.32 51.88 21.95 66.51 87.09 44.89 94.11 50.50 50.82 31.81 46.87 23.56 19.93 22.26 47 I12_AR8 ActiveIntronRegion 0 78.18 28.34 42.55 55.06 35.30 28.23 21.92 38.50 46.66 46.84 45.89 20.33 55.31 78.95 54.28 82.76 42.09 74.20 28.47 49.57 28.74 24.12 18.94 48 E13_Aa NovelBoundary 1 93.87 53.54 67.65 67.39 78.78 63.54 40.94 30.07 77.83 75.00 55.65 31.06 86.03 139.80 87.77 100.49 47.59 125.15 40.38 97.03 25.64 16.66 22.96 49 ER13a ExonRegion 0 142.29 43.24 127.91 127.92 72.18 131.69 50.88 76.35 76.47 92.45 291.50 35.57 147.27 352.16 262.63 354.71 178.63 207.25 79.57 119.76 148.77 79.86 92.83 50 E13_Da NovelBoundary 1 148.10 38.74 87.11 74.15 20.46 48.15 9.98 69.00 69.76 68.01 60.02 24.46 54.70 156.98 168.74 233.53 47.31 209.42 113.51 71.40 37.62 43.54 64.96 51 E13a_E14a KnownJunction 0 95.50 22.56 95.30 120.70 31.58 104.20 31.58 51.30 53.33 65.38 223.06 25.06 68.34 319.74 198.53 316.33 164.38 134.93 100.61 82.96 131.96 74.15 81.18 52 I13 Intron 1 74.21 29.82 43.36 33.66 37.95 35.95 18.57 36.15 33.74 28.33 44.98 18.83 29.68 76.72 51.24 88.10 43.67 59.30 25.38 47.81 29.85 15.27 18.25 53 I13_AR1 ActiveIntronRegion 0 74.66 30.00 43.63 33.87 38.17 36.17 18.69 36.36 33.95 28.50 45.26 18.95 29.87 77.19 51.56 88.63 43.95 59.67 25.54 48.11 30.02 15.37 18.37 54 E14_Aa NovelBoundary 1 226.26 56.44 89.62 81.84 113.24 73.76 60.72 61.41 35.36 57.22 78.44 0.00 60.55 88.65 49.32 92.28 52.08 143.39 36.71 78.23 31.57 25.29 37.99 55 ER14a ExonRegion 0 199.15 69.78 111.96 141.17 82.38 109.87 48.48 82.84 70.13 84.38 297.46 40.24 142.87 386.27 256.75 368.42 196.28 184.60 103.34 86.90 148.55 78.45 102.01 56 E14_Da NovelBoundary 0 16.74 22.89 8.01 23.37 19.95 5.56 6.01 17.09 6.66 12.44 2.68 0.00 0.00 21.37 5.69 19.57 0.00 17.20 4.24 11.70 0.00 0.00 3.67 57 E14a_E15a KnownJunction 1 188.77 76.37 118.83 140.28 49.66 52.87 42.18 99.03 86.17 129.07 288.18 59.12 126.13 319.86 223.99 376.74 141.28 262.77 152.00 131.80 170.88 110.65 139.14 58 E14a_E16a NovelJunction 0 16.60 6.25 13.01 19.58 0.00 13.63 6.27 21.19 13.51 4.30 12.11 5.85 6.17 10.01 20.64 3.25 8.51 14.72 8.47 9.33 2.47 2.51 0.00 59 I14 Intron 0 51.39 13.81 24.67 17.99 24.88 10.42 9.28 11.41 9.24 9.21 8.56 1.84 7.46 15.11 9.80 15.57 6.82 16.07 6.58 7.22 5.69 3.69 5.85 60 I14_AR1 ActiveIntronRegion 0 51.54 13.85 24.74 18.04 24.96 10.45 9.31 11.44 9.26 9.23 8.58 1.85 7.48 15.16 9.83 15.62 6.84 16.11 6.60 7.24 5.70 3.70 5.87 61 E15_Aa NovelBoundary 0 50.75 6.12 41.01 30.37 11.54 2.90 10.55 16.96 12.96 8.54 14.42 0.00 6.82 9.77 13.35 19.91 0.00 14.01 13.65 12.66 8.65 3.12 0.00 62 ER15a ExonRegion 0 258.22 75.52 149.27 146.54 79.62 102.89 46.09 100.25 95.24 132.97 344.34 34.82 106.22 366.24 228.21 338.44 219.76 185.31 84.78 121.73 169.50 99.01 83.23 63 E15_Da NovelBoundary 0 135.65 8.68 75.54 12.49 24.70 2.56 8.35 8.13 19.56 11.58 2.42 0.00 0.00 14.01 5.19 8.29 3.83 28.69 0.00 12.53 9.27 15.49 4.27 64 E15a_E16a KnownJunction 0 448.30 89.13 124.48 154.73 80.73 154.63 69.29 121.95 102.66 152.71 348.61 31.06 118.17 383.84 273.94 408.01 264.33 212.99 150.69 150.46 182.98 114.81 69.66 65 I15 Intron 0 47.12 5.42 56.29 26.28 25.46 4.54 10.58 23.04 16.46 5.20 4.05 0.00 2.73 6.73 7.73 10.18 2.51 16.42 1.21 6.07 8.38 4.76 8.94 66 I15_AR1 ActiveIntronRegion 0 47.48 5.46 56.72 26.47 25.65 4.57 10.66 23.21 16.59 5.24 4.08 0.00 2.75 6.78 7.79 10.26 2.53 16.55 1.22 6.12 8.44 4.79 9.01 67 E16_Aa NovelBoundary 0 71.05 12.23 95.18 39.62 34.63 4.77 8.97 39.39 17.51 9.51 5.00 0.00 6.82 0.00 4.45 3.42 4.21 11.36 3.58 2.49 12.48 6.25 4.35 68 ER16a ExonRegion 0 469.13 140.27 244.01 255.19 126.98 180.52 65.65 153.41 120.40 155.22 465.08 52.61 110.37 431.24 303.60 545.49 276.63 305.10 133.87 158.56 179.75 143.80 127.00 69 E16_Da NovelBoundary 0 150.10 20.59 83.47 40.35 23.09 10.33 21.33 34.05 22.22 24.15 20.11 6.30 19.15 23.43 56.49 8.63 9.54 15.30 8.09 5.82 17.24 5.20 11.95 70 E16a_E17a KnownJunction 0 264.49 84.06 196.33 281.52 134.21 167.46 45.80 146.14 89.26 129.39 287.97 37.96 88.63 402.14 283.83 397.93 225.15 175.39 52.80 159.03 120.53 119.28 76.91 71 I16 Intron 0 94.96 15.68 86.81 41.56 47.59 15.01 24.17 33.25 23.18 9.95 14.30 3.97 6.25 24.03 12.12 22.92 12.99 14.90 7.52 10.72 10.75 11.15 6.47 72 I16_AR1 ActiveIntronRegion 0 95.54 15.78 87.34 41.81 47.89 15.10 24.32 33.45 23.32 10.01 14.39 3.99 6.29 24.18 12.19 23.07 13.07 14.99 7.57 10.78 10.82 11.22 6.51 73 E17_Aa NovelBoundary 0 133.58 10.98 110.11 39.62 96.52 31.57 66.95 21.97 29.48 12.33 5.11 0.00 0.00 14.54 32.88 26.92 4.77 16.37 8.47 8.88 5.50 10.29 7.77 74 ER17a ExonRegion 0 341.41 85.84 201.99 182.55 117.69 127.48 59.49 126.99 94.57 121.37 338.21 38.82 99.68 404.21 281.58 373.27 210.62 188.47 77.72 114.54 136.20 117.73 79.95 75 IG3 Intergenic 0 33.24 3.43 34.85 13.38 33.44 3.73 9.39 8.70 11.81 5.77 2.94 0.00 3.40 1.90 3.95 4.02 4.46 0.93 4.30 2.16 7.82 4.93 7.93 76 IG3_AR1 ActiveIntergenicRegion 0 33.46 3.45 35.07 13.47 33.64 3.76 9.44 8.76 11.89 5.81 2.96 0.00 3.42 1.92 3.97 4.04 4.49 0.94 4.33 2.17 7.87 4.96 7.99