Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AMICA1 Gene 0 164.52 0.68 0.99 14.25 77.79 26.20 21.18 32.44 14.72 4.03 1.66 2.91 8.16 36.46 5.57 21.54 33.78 0.00 0.00 0.04 0.00 0.52 0.00 2 414357 Transcript 0 11.54 0.00 0.00 0.73 7.67 1.56 2.27 2.91 0.95 0.96 0.00 0.00 1.88 1.11 0.00 2.08 1.54 0.00 0.00 0.00 0.00 0.00 0.00 3 356289 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 292067 Transcript 0 12.49 0.00 0.00 0.23 4.79 0.00 1.90 0.44 0.11 0.00 0.00 0.00 0.00 0.74 0.00 0.00 0.92 0.00 0.00 0.00 0.00 0.00 0.00 5 ER1a ExonRegion 0 98.72 1.35 0.45 2.68 63.30 40.14 25.59 7.56 5.93 1.38 3.02 0.00 2.56 21.68 0.00 27.58 28.21 0.00 0.00 0.00 0.00 0.69 0.00 6 E1a_E2a KnownJunction 0 78.46 0.00 1.51 6.63 54.33 18.63 23.01 22.10 16.06 2.82 2.00 0.00 0.00 7.71 0.00 17.77 33.57 0.00 0.00 0.00 0.00 0.00 0.00 7 E1a_E4a NovelJunction 0 54.82 0.00 0.00 11.72 13.41 9.03 10.64 7.35 5.82 1.42 0.00 0.00 0.00 0.00 0.00 10.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER2a ExonRegion 1 39.14 0.00 0.39 6.38 21.70 4.05 4.85 16.00 8.43 3.08 1.96 0.00 5.88 12.30 2.21 10.33 43.54 0.00 0.00 0.00 0.00 0.00 0.00 9 E2a_E4a KnownJunction 0 51.56 0.00 0.00 11.65 18.59 5.39 4.37 19.22 8.33 4.27 4.79 0.00 13.31 13.89 8.90 14.44 48.99 0.00 0.00 0.00 0.00 0.00 0.00 10 ER3a ExonRegion 0 4.53 0.00 0.00 0.46 5.50 0.00 1.68 0.88 0.22 0.00 0.00 0.00 0.00 1.49 0.00 0.00 1.85 0.00 0.00 0.00 0.00 0.00 0.00 11 E3a_E4a KnownJunction 0 20.45 0.00 0.00 0.00 4.07 0.00 2.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER4a ExonRegion 0 58.07 0.00 0.58 12.41 55.00 8.99 11.75 37.37 17.38 3.34 3.83 0.00 2.69 51.27 9.94 50.37 77.69 0.00 0.00 0.00 0.00 0.69 0.00 13 E4a_E5a KnownJunction 0 84.39 0.00 0.00 22.54 93.63 15.10 29.68 44.73 23.93 2.90 0.00 0.00 6.17 70.46 4.45 51.52 63.77 0.00 0.00 0.00 0.00 0.00 0.00 14 ER5a ExonRegion 0 108.40 0.92 0.03 21.16 112.82 46.90 33.05 40.47 21.34 3.45 1.74 4.69 9.15 57.17 10.87 28.25 65.51 0.00 0.00 0.00 0.00 0.94 0.00 15 E5_Da NovelBoundary 0 83.72 0.00 0.00 3.30 25.47 0.00 2.25 19.02 1.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.51 0.00 0.00 0.00 0.00 0.00 0.00 16 E5a_E6a KnownJunction 0 159.07 0.00 0.00 27.30 70.29 39.35 14.71 49.86 22.25 1.67 0.00 12.30 6.82 74.52 21.26 23.33 67.32 0.00 0.00 0.00 0.00 0.00 0.00 17 E6a_E8b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER6a ExonRegion 0 166.90 0.00 1.23 23.95 64.03 33.14 23.07 42.22 23.47 2.62 0.00 12.99 13.07 72.39 14.30 23.78 55.17 0.00 0.00 0.00 0.00 0.00 0.00 19 ER6b ExonRegion 0 217.71 0.00 1.83 20.27 77.90 37.78 27.04 46.70 18.99 4.10 6.36 8.30 24.52 68.92 10.12 48.39 54.77 0.00 0.00 0.00 0.00 2.21 0.00 20 E6_Db NovelBoundary 1 41.79 0.00 0.00 3.43 41.34 0.00 1.94 8.34 7.73 0.00 0.00 0.00 6.01 24.31 4.45 0.00 27.02 0.00 0.00 0.00 0.00 0.00 0.00 21 E6b_E7a KnownJunction 0 219.89 0.00 3.64 15.22 47.28 49.63 21.24 26.82 11.14 2.71 5.00 0.00 12.17 66.57 6.30 15.47 31.79 0.00 0.00 0.00 0.00 0.00 0.00 22 I6 Intron 0 29.53 0.15 0.14 3.98 22.38 4.34 7.30 8.96 5.59 0.89 0.64 2.72 4.57 8.60 1.06 6.93 12.09 0.00 0.00 0.00 0.00 0.46 0.00 23 I6_AR1 ActiveIntronRegion 0 26.61 0.00 0.24 3.47 28.16 6.86 10.85 6.73 7.59 0.34 1.84 0.90 7.09 17.15 4.65 10.76 20.01 0.00 0.00 0.00 0.00 0.83 0.00 24 I6_SR1 SilentIntronRegion 0 22.02 0.25 0.15 2.82 23.91 4.00 7.13 11.15 5.74 0.85 0.50 3.83 3.18 8.07 0.33 6.23 10.54 0.00 0.00 0.00 0.00 0.39 0.00 25 I6_AR2 ActiveIntronRegion 0 53.06 0.00 0.00 7.67 13.32 3.15 4.77 4.87 3.48 1.47 0.00 1.22 6.30 2.77 0.00 5.61 9.62 0.00 0.00 0.00 0.00 0.36 0.00 26 E7_Aa NovelBoundary 0 118.10 0.00 0.00 3.43 36.59 7.50 15.72 8.71 2.84 0.00 0.00 0.00 6.33 12.18 0.00 3.93 23.28 0.00 0.00 0.00 0.00 0.00 0.00 27 ER7a ExonRegion 0 167.77 0.88 1.92 18.06 85.57 34.30 25.82 42.85 22.82 6.86 2.02 8.70 14.23 60.94 5.38 31.66 53.60 0.00 0.00 0.00 0.00 0.89 0.00 28 E7a_E8a KnownJunction 0 199.81 5.13 0.00 14.92 40.92 51.90 44.74 48.14 31.19 5.78 0.00 0.00 0.00 100.59 0.00 24.52 42.45 0.00 0.00 0.00 0.00 0.00 0.00 29 I7 Intron 0 28.53 0.13 0.00 2.74 18.58 5.30 6.28 7.45 6.42 0.75 0.36 1.75 1.82 9.60 0.77 5.88 9.34 0.00 0.00 0.00 0.00 0.20 0.00 30 I7_AR1 ActiveIntronRegion 0 28.57 0.13 0.00 2.75 18.60 5.31 6.29 7.45 6.43 0.75 0.36 1.75 1.82 9.61 0.77 5.89 9.35 0.00 0.00 0.00 0.00 0.20 0.00 31 E8_Aa NovelBoundary 0 81.87 0.00 0.00 7.89 15.28 2.38 8.57 14.21 6.92 0.00 0.00 0.00 6.82 14.72 0.00 0.00 4.77 0.00 0.00 0.00 0.00 0.00 0.00 32 ER8a ExonRegion 0 175.20 2.54 0.00 10.98 51.88 37.80 30.30 54.49 34.34 6.63 4.03 5.77 4.69 80.75 0.08 20.39 49.79 0.00 0.00 0.00 0.00 0.00 0.00 33 E8_Ab KnownBoundary 1 243.38 2.43 0.00 17.78 103.06 32.48 25.17 63.58 40.80 8.70 7.05 6.30 7.63 55.80 0.00 12.30 55.45 0.00 0.00 0.00 0.00 0.00 0.00 34 ER8b ExonRegion 0 257.35 0.10 0.87 23.59 92.82 51.36 27.98 65.33 21.87 8.20 2.35 1.22 21.17 59.34 9.13 35.78 46.34 0.00 0.00 0.00 0.00 0.00 0.00 35 E8a_E9a KnownJunction 0 344.06 0.00 0.00 23.87 180.05 98.01 44.38 72.87 28.41 14.51 0.00 0.00 47.07 69.99 0.00 23.41 36.75 0.00 0.00 0.00 0.00 0.00 0.00 36 ER9a ExonRegion 0 349.09 1.10 2.02 30.36 275.40 89.47 69.00 77.49 35.19 10.37 4.61 10.09 30.04 82.76 3.27 34.15 45.93 0.00 0.00 0.00 0.00 0.11 0.00 37 E9_Da NovelBoundary 0 79.35 0.00 0.00 13.19 58.83 9.60 11.61 23.82 4.80 3.01 0.00 0.00 8.28 9.24 0.00 8.03 8.42 0.00 0.00 0.00 0.00 0.00 0.00 38 E9a_E10a KnownJunction 0 242.04 0.00 0.00 29.87 192.61 32.88 24.02 46.29 23.67 3.63 4.53 0.00 15.10 62.81 17.80 12.22 15.90 0.00 0.00 0.00 0.00 0.00 0.00 39 E9_Db NovelBoundary 0 92.46 0.00 0.00 3.16 61.97 58.38 20.58 11.62 11.46 4.81 0.00 0.00 13.15 34.85 0.00 24.44 13.28 0.00 0.00 0.00 0.00 0.00 0.00 40 ER9b ExonRegion 0 23.07 0.00 0.00 1.45 15.34 3.12 4.55 5.82 1.89 1.91 0.00 0.00 3.75 2.22 0.00 4.16 3.08 0.00 0.00 0.00 0.00 0.00 0.00 41 I9 Intron 0 237.39 0.64 0.00 11.02 61.82 15.17 19.64 20.80 6.16 1.29 0.49 2.70 4.32 13.71 1.75 7.88 6.67 0.00 0.00 0.00 0.00 0.00 0.00 42 I9_AR1 ActiveIntronRegion 0 237.97 0.64 0.00 11.05 61.97 15.20 19.69 20.86 6.17 1.30 0.49 2.71 4.33 13.75 1.75 7.90 6.68 0.00 0.00 0.00 0.00 0.00 0.00 43 E10_Aa NovelBoundary 0 302.42 0.00 0.00 19.38 108.40 39.18 25.92 47.93 5.12 0.00 0.00 0.00 6.82 22.43 0.00 28.20 9.26 0.00 0.00 0.00 0.00 0.00 0.00 44 ER10a ExonRegion 0 728.47 1.96 2.82 39.49 213.72 56.07 47.37 76.41 30.25 7.41 3.91 2.54 14.50 56.12 10.77 29.14 49.29 0.00 0.00 0.00 0.00 2.01 0.00 45 E10a_E11a KnownJunction 0 717.16 3.22 3.31 33.13 133.28 24.36 42.57 71.18 34.00 7.44 0.00 0.00 13.64 66.98 17.06 37.34 42.26 0.00 0.00 0.00 0.00 2.69 0.00 46 ER11a ExonRegion 0 225.29 0.95 1.53 16.40 82.79 19.18 19.75 34.21 14.22 4.81 0.31 2.18 6.10 28.23 7.00 15.49 19.76 0.00 0.00 0.16 0.00 0.35 0.00 47 IG17_AR1 ActiveIntergenicRegion 0 5.02 7.24 0.00 3.61 3.17 2.17 0.79 0.00 0.00 2.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.11 15.11 6.31 1.31 0.00 0.00