Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PTS Gene 0 69.41 128.36 128.27 121.28 72.34 148.04 52.78 73.03 92.96 65.14 40.18 24.73 16.67 28.09 46.16 31.13 45.97 63.60 112.15 100.93 28.03 133.45 45.57 2 280362 Transcript 0 63.16 139.87 143.74 133.93 84.99 195.67 61.79 81.21 102.52 69.71 41.72 25.27 12.14 34.63 60.24 41.89 55.69 114.42 178.09 134.71 37.29 150.86 79.69 3 ER1a ExonRegion 0 64.80 110.91 41.54 44.10 34.97 146.52 48.27 19.02 29.40 29.65 19.53 0.91 0.67 15.47 27.33 27.83 29.20 52.07 78.83 56.96 31.70 47.14 36.49 4 E1a_E2a KnownJunction 0 43.27 48.28 45.30 39.29 18.59 52.47 23.98 33.80 27.17 38.95 33.53 5.85 6.82 16.83 13.72 4.36 33.19 24.87 49.98 54.39 38.43 24.80 11.44 5 I1 Intron 0 11.17 15.55 7.94 9.85 9.45 17.65 8.02 9.50 10.86 4.44 11.25 9.25 11.65 9.83 7.62 10.73 9.87 20.94 18.92 19.49 13.08 17.22 12.88 6 I1_SR1 SilentIntronRegion 0 7.02 22.28 8.17 10.34 6.40 18.96 4.80 10.33 10.51 4.88 12.08 6.07 12.64 11.21 7.82 13.99 11.97 29.49 25.56 20.36 22.10 15.27 14.95 7 I1_AR2 ActiveIntronRegion 0 10.48 9.10 5.31 6.47 12.88 13.90 6.67 5.74 10.85 3.85 11.73 9.94 10.47 7.75 4.45 6.94 4.69 10.27 12.55 17.98 4.59 13.89 9.24 8 I1_AR3 ActiveIntronRegion 1 15.06 8.10 7.19 13.16 12.02 10.82 10.94 8.76 10.49 1.05 10.46 28.82 3.46 14.70 6.14 15.74 14.94 16.30 10.39 18.80 5.35 21.35 14.25 9 I1_SR3 SilentIntronRegion 1 19.83 9.31 13.03 24.10 7.32 15.93 15.75 17.47 17.55 3.14 12.72 43.75 7.41 13.85 12.06 11.89 10.60 24.31 9.56 28.56 7.89 43.97 25.19 10 I1_AR4 ActiveIntronRegion 0 25.73 9.42 14.30 13.88 17.40 21.18 19.48 13.89 15.38 6.58 10.77 11.35 16.04 8.89 12.39 7.21 10.81 15.79 15.13 21.05 2.19 29.66 13.19 11 E2_Aa NovelBoundary 0 33.27 14.14 11.56 3.53 8.23 18.34 15.55 8.54 8.04 6.50 2.05 0.00 0.00 2.47 8.90 3.25 4.21 8.42 3.86 15.21 2.53 14.70 0.00 12 ER2a ExonRegion 0 61.17 112.53 102.89 75.76 40.91 94.12 50.54 52.87 76.90 59.01 64.27 36.10 22.98 42.13 45.15 30.87 65.44 121.88 186.70 171.81 68.04 97.35 73.82 13 E2_Da NovelBoundary 0 6.96 9.67 7.54 12.79 20.54 30.04 21.42 24.15 21.67 15.58 2.32 5.55 19.64 12.30 11.25 8.63 41.14 18.86 22.12 20.39 16.68 17.64 28.60 14 E2a_E3a KnownJunction 0 20.82 84.92 121.64 59.93 10.95 51.11 10.47 53.44 67.79 51.66 20.32 11.55 6.82 30.61 77.76 24.35 38.06 147.04 168.85 151.74 36.33 148.37 102.78 15 E2a_E4a NovelJunction 1 16.89 22.69 20.05 51.91 16.30 28.62 8.97 20.13 16.12 18.08 65.49 37.06 0.00 30.55 42.15 53.92 8.51 22.22 4.24 37.20 0.00 8.33 26.97 16 I2 Intron 0 13.24 23.44 14.55 30.53 30.59 44.90 21.75 15.07 17.32 12.46 8.18 8.59 12.67 8.85 7.52 7.76 11.74 22.19 23.66 29.50 12.20 31.23 16.40 17 I2_AR1 ActiveIntronRegion 0 12.99 16.34 14.41 28.34 33.43 43.28 22.34 15.62 20.31 13.49 8.47 9.36 13.47 9.81 6.97 6.73 13.99 18.69 22.11 31.56 6.76 39.43 14.81 18 I2_SR1 SilentIntronRegion 0 17.02 40.12 11.53 32.15 41.29 71.44 27.54 13.65 5.72 7.40 8.48 5.06 10.96 9.92 11.21 6.76 10.88 25.91 22.73 26.67 25.93 22.50 14.96 19 I2_AR2 ActiveIntronRegion 0 12.79 33.54 15.77 34.79 21.90 41.07 19.03 14.43 14.50 11.85 7.53 8.03 11.57 6.63 7.67 10.21 7.40 28.51 27.26 26.21 19.64 16.94 20.18 20 E3a_E4a KnownJunction 0 40.16 161.42 101.53 82.14 56.45 107.10 40.81 51.88 79.54 54.77 24.37 5.40 0.00 21.90 45.86 15.47 47.69 144.88 310.22 105.78 19.40 156.21 92.70 21 ER3a ExonRegion 0 30.18 121.93 145.34 97.71 34.78 84.59 27.34 69.74 97.41 73.35 29.75 10.35 2.85 31.07 68.75 21.58 47.50 200.68 261.89 145.51 34.78 185.80 113.25 22 I3 Intron 0 28.69 47.79 30.41 60.05 31.78 66.77 34.02 22.28 23.53 16.99 10.23 9.80 6.45 10.04 10.14 8.83 9.38 35.96 25.91 23.63 15.08 22.87 22.75 23 I3_AR1 ActiveIntronRegion 0 28.84 48.03 30.57 60.36 31.95 67.11 34.19 22.40 23.64 17.08 10.28 9.85 6.48 10.09 10.19 8.87 9.42 36.14 26.04 23.75 15.16 22.98 22.86 24 E4_Aa NovelBoundary 0 57.05 80.64 29.09 62.93 61.97 80.64 40.81 37.99 16.84 18.02 2.16 6.30 12.99 23.84 19.90 20.34 14.31 21.02 52.52 61.30 10.63 30.37 23.47 25 ER4a ExonRegion 0 57.78 168.97 172.86 188.77 118.91 218.48 68.85 101.37 128.82 78.53 39.34 15.95 11.85 58.61 81.18 78.16 65.79 190.19 254.16 142.78 36.84 176.84 122.77 26 E4a_E5a KnownJunction 0 101.28 192.07 211.49 246.66 204.24 367.35 107.71 128.40 166.35 93.00 47.22 42.16 12.50 36.32 49.20 106.98 76.11 140.32 189.09 183.06 46.27 164.29 125.14 27 I4_SR2 SilentIntronRegion 0 17.56 9.46 5.30 5.75 9.90 5.53 7.70 2.04 2.83 2.24 3.34 0.96 3.18 3.51 4.33 3.05 2.23 2.39 6.37 4.74 1.66 2.98 2.90 28 I4_AR3 ActiveIntronRegion 0 13.92 14.13 15.46 13.08 10.61 10.57 9.15 7.89 5.58 5.33 2.81 2.17 5.07 3.30 5.14 1.56 0.56 4.82 5.03 4.66 0.88 8.58 1.99 29 E5_Aa NovelBoundary 0 17.19 20.65 18.21 19.05 32.34 5.39 19.03 6.49 7.18 5.29 2.11 12.45 0.00 9.12 10.38 4.19 0.00 8.87 13.84 3.13 2.41 5.45 7.68 30 ER5a ExonRegion 0 99.06 160.14 232.96 224.86 191.60 395.66 116.17 148.33 160.44 96.28 64.11 52.38 21.60 53.18 87.81 64.68 71.74 99.65 164.20 189.09 39.29 190.57 100.63 31 E5a_E6a KnownJunction 0 105.28 249.63 266.73 282.51 154.24 515.90 140.04 154.93 192.30 120.80 76.23 69.17 26.46 51.68 124.11 63.32 95.37 102.68 212.34 195.08 40.83 317.62 71.88 32 ER6a ExonRegion 0 71.02 127.74 138.91 131.50 69.20 119.03 45.48 79.50 101.60 70.87 40.19 28.12 21.01 23.12 41.80 23.15 42.56 34.33 82.72 85.62 18.25 150.46 25.73