Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RDX Gene 0 91.66 126.82 58.90 83.15 75.39 137.95 78.94 51.00 58.69 55.12 178.76 147.68 189.67 144.22 69.39 90.25 119.30 55.45 5.10 76.71 70.82 120.80 67.82 2 429481 Transcript 0 0.00 0.00 0.00 0.00 0.00 2.61 0.00 0.00 0.00 1.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 343115 Transcript 0 51.08 85.07 49.87 73.22 72.58 109.44 74.30 38.31 36.37 47.40 135.29 112.82 107.82 100.79 70.23 60.82 78.85 25.32 3.12 51.02 38.76 99.71 42.06 4 405097 Transcript 0 2.97 32.47 3.75 20.02 8.90 50.57 3.16 21.09 30.94 10.74 0.96 0.21 3.46 0.64 4.34 2.42 0.08 2.99 0.00 12.86 1.07 3.36 0.33 5 IG24_AR2 ActiveIntergenicRegion 0 0.00 0.00 0.53 0.00 0.00 0.53 0.00 0.00 0.00 0.00 3.38 0.00 1.13 2.40 3.23 0.00 3.04 0.00 0.00 0.00 0.00 8.50 2.43 6 ER1a ExonRegion 0 16.46 16.94 4.21 3.95 4.71 26.74 14.31 0.70 5.82 5.63 15.06 1.21 4.23 27.32 6.19 9.13 17.19 10.96 0.00 4.39 26.30 16.97 12.75 7 E1a_E2a KnownJunction 1 17.63 23.61 15.52 13.42 4.33 5.56 6.23 9.90 12.76 10.21 65.75 6.30 18.34 62.51 18.54 12.13 55.82 16.42 0.00 22.88 71.48 37.54 0.00 8 ER2a ExonRegion 1 26.29 35.51 37.24 50.84 21.79 49.42 17.19 28.20 49.78 42.41 193.37 94.45 109.10 209.04 46.84 72.62 137.77 63.21 6.62 71.58 148.49 105.49 63.72 9 E2a_E3a KnownJunction 1 21.41 45.65 59.61 90.40 72.50 123.45 23.94 54.59 75.38 71.56 256.70 79.83 265.40 308.08 93.08 132.70 171.29 101.98 18.82 128.47 199.17 257.24 152.12 10 ER3a ExonRegion 1 9.00 47.14 48.45 61.20 57.21 114.42 42.92 50.66 74.20 60.61 248.26 80.35 162.87 192.69 41.31 132.65 168.50 95.82 8.49 95.69 154.23 110.80 92.40 11 E3a_E4a KnownJunction 1 10.15 55.85 47.69 71.52 39.56 199.49 56.70 44.98 67.62 52.30 221.00 150.20 271.74 196.54 14.09 98.95 185.60 83.28 4.80 80.92 135.91 115.98 29.88 12 E3a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 5.22 0.00 0.00 0.00 3.17 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E4_Aa NovelBoundary 0 21.71 13.09 20.93 9.42 7.64 5.39 6.27 4.15 3.59 0.00 0.00 0.00 0.00 0.00 8.90 3.16 0.00 0.00 0.00 15.47 0.00 0.00 0.00 14 ER4a ExonRegion 0 34.31 88.80 64.78 90.52 43.40 146.42 60.27 68.18 80.00 70.61 334.67 184.36 245.88 221.88 61.65 106.28 199.91 58.99 8.10 112.92 167.62 182.89 88.59 15 E4_Da NovelBoundary 0 6.45 21.18 23.06 15.48 3.23 0.00 5.65 9.32 2.72 0.00 9.95 6.00 0.00 0.00 4.45 7.18 4.77 1.53 0.00 9.08 3.03 0.00 0.00 16 E4a_E5a KnownJunction 0 82.46 125.64 60.14 82.07 32.09 173.37 64.57 88.88 82.58 87.49 409.74 228.67 321.73 333.22 103.59 148.34 164.28 63.26 12.24 167.65 150.61 324.35 117.12 17 I4_AR2 ActiveIntronRegion 0 14.82 10.85 15.93 13.63 8.03 1.83 14.56 8.64 2.47 3.44 1.93 0.72 18.76 0.00 2.42 1.98 3.30 0.00 3.19 9.93 0.00 0.00 0.00 18 I4_SR3 SilentIntronRegion 0 6.06 8.02 14.84 11.13 6.99 1.83 9.27 6.77 1.65 2.87 2.04 5.17 28.53 1.17 10.56 3.96 1.47 0.00 1.42 7.33 0.00 0.00 0.00 19 ER5a ExonRegion 1 81.84 91.39 82.33 99.32 71.77 206.99 84.05 81.00 100.64 83.55 388.97 259.09 446.92 295.52 64.62 152.16 231.61 85.35 10.39 119.02 97.04 220.19 106.61 20 E5a_E6a KnownJunction 1 356.80 161.88 71.49 84.47 121.14 199.66 64.08 64.08 99.83 80.83 340.67 228.37 451.27 300.43 67.87 127.57 311.92 70.68 3.67 109.55 80.99 210.40 86.05 21 ER6a ExonRegion 1 235.38 139.76 80.21 89.08 81.33 164.88 90.03 60.71 98.02 82.19 308.15 300.57 449.11 283.38 59.96 95.11 231.66 54.76 3.76 109.09 65.64 169.46 84.01 22 E6_Da KnownBoundary 0 206.85 166.35 95.92 119.27 56.88 154.85 137.92 66.46 106.28 82.17 272.81 342.86 525.29 298.78 80.23 98.35 175.03 47.05 4.80 128.47 61.10 153.63 96.20 23 E6a_E14b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 ER6b ExonRegion 1 396.70 209.98 80.47 111.06 105.77 196.83 143.84 63.68 89.56 83.52 271.25 289.06 405.55 266.58 60.47 100.99 216.50 51.45 6.37 123.15 61.62 194.34 96.51 25 E6b_E7a KnownJunction 1 454.38 255.22 70.22 137.05 159.59 284.50 165.17 68.39 82.09 97.97 282.91 177.51 341.70 221.67 41.78 106.47 256.76 46.39 4.80 142.22 77.04 230.30 96.80 26 ER7a ExonRegion 0 366.55 349.06 88.93 148.72 142.43 301.79 159.48 69.35 104.54 111.59 311.17 396.51 502.22 251.40 76.10 130.81 244.51 59.34 11.38 149.49 64.34 241.15 103.96 27 E7a_E8a KnownJunction 1 129.95 210.36 91.24 152.03 255.18 371.04 245.41 81.33 121.47 117.14 271.28 338.06 614.41 217.26 81.96 157.57 181.02 59.44 17.69 150.78 57.02 274.94 56.34 28 ER8a ExonRegion 0 168.95 230.23 123.54 170.28 233.18 275.09 198.76 99.73 113.57 117.36 293.58 366.49 556.37 260.55 99.06 140.43 227.01 56.88 10.31 174.97 95.67 275.05 138.17 29 E8a_E9a KnownJunction 0 232.71 281.27 125.99 202.14 221.99 326.29 228.23 110.45 117.22 123.94 353.46 423.29 545.58 422.33 187.40 191.74 256.10 80.21 4.52 223.20 148.51 386.69 207.86 30 ER9a ExonRegion 0 514.66 359.25 133.76 167.98 173.16 251.66 153.91 98.72 110.66 94.52 306.68 308.16 499.03 242.21 103.61 147.03 217.98 73.27 7.36 159.31 108.81 204.83 134.89 31 E9a_E10a KnownJunction 0 442.45 458.47 136.01 183.19 132.94 197.56 111.42 121.46 112.27 83.25 332.56 241.28 531.78 268.00 170.59 216.35 263.21 85.02 4.80 160.37 60.48 216.03 141.45 32 ER10a ExonRegion 0 353.88 390.59 106.09 142.94 121.84 232.30 140.82 92.74 109.09 84.91 266.95 274.18 499.29 260.71 138.00 160.38 232.55 98.69 6.44 139.74 113.60 197.65 138.49 33 E10a_E11a KnownJunction 0 124.61 428.34 134.83 179.50 138.88 314.88 194.80 119.77 126.71 93.43 278.49 237.83 367.35 227.50 98.52 131.50 254.70 96.01 17.88 158.20 166.00 223.07 166.29 34 E11_Aa NovelBoundary 1 33.41 16.25 15.23 32.53 27.67 22.09 18.86 22.51 1.45 9.54 4.42 0.00 33.28 7.06 9.64 67.42 15.71 8.79 0.00 12.14 0.00 20.88 3.84 35 ER11a ExonRegion 1 103.79 242.85 123.27 188.40 126.16 271.32 141.65 115.91 136.31 109.93 308.45 362.57 650.25 344.18 170.85 300.65 256.01 248.56 17.37 179.95 219.51 305.79 225.34 36 E11a_E12a KnownJunction 0 145.95 260.61 178.47 231.11 163.33 226.57 145.30 132.05 163.80 152.28 616.31 360.27 319.95 373.42 189.13 326.32 384.95 315.09 25.98 244.10 335.57 407.88 271.97 37 ER12a ExonRegion 0 113.02 289.12 123.76 150.88 109.27 196.08 104.37 91.63 126.51 104.10 453.98 273.22 299.46 358.39 125.28 219.43 333.78 195.25 9.76 181.58 284.21 186.24 143.17 38 E12a_E13a KnownJunction 0 147.95 443.01 96.48 140.04 158.06 197.90 142.07 98.99 125.29 122.33 282.91 266.79 236.35 424.98 159.10 215.67 281.91 273.59 17.13 162.67 237.41 141.57 173.37 39 ER13a ExonRegion 0 204.28 355.32 112.17 140.88 132.54 285.86 160.89 101.46 124.99 91.35 348.99 239.65 321.53 309.48 138.90 244.67 255.96 201.82 14.04 177.21 194.92 218.53 185.88 40 E13a_E14a KnownJunction 0 62.90 374.28 153.01 204.40 134.97 192.84 121.80 130.99 148.09 86.33 387.26 280.59 206.80 274.59 155.76 258.14 213.65 202.58 13.74 218.53 173.29 217.69 187.03 41 E14_Ab NovelBoundary 0 80.24 324.15 126.64 162.62 118.76 261.21 112.08 114.97 137.56 81.55 334.40 246.08 125.64 174.41 61.19 202.60 221.60 159.51 4.80 144.71 194.48 178.25 158.35 42 ER14a ExonRegion 0 59.40 312.83 129.36 166.50 105.42 212.97 94.09 117.77 137.34 80.82 378.14 241.58 153.52 231.06 102.61 226.08 211.26 179.54 10.51 173.26 191.87 184.32 166.70 43 ER14b ExonRegion 0 63.51 225.98 95.56 159.67 116.10 259.62 135.58 108.72 109.08 84.46 365.76 261.32 192.36 237.84 142.29 205.58 241.54 164.07 10.67 160.55 207.37 162.80 140.60 44 E14_Da KnownBoundary 1 30.97 86.63 42.55 92.20 99.58 121.41 78.08 34.54 37.41 31.80 159.72 36.31 68.34 76.17 50.44 114.93 74.61 74.45 4.52 72.93 71.60 84.32 108.58 45 E14a_E15a KnownJunction 0 3.11 58.15 0.00 22.34 8.32 56.73 0.00 22.47 21.61 5.08 2.68 0.00 0.00 0.00 8.90 7.52 0.00 1.62 0.00 11.89 2.47 9.25 0.00 46 E14_Db KnownBoundary 0 69.72 155.24 61.06 71.29 41.77 112.55 50.43 28.05 48.21 67.29 204.21 74.12 67.37 41.50 13.35 134.49 117.16 103.88 15.15 111.98 122.57 99.50 83.23 47 ER14c ExonRegion 0 83.60 218.61 97.11 161.16 126.43 222.35 128.76 83.83 82.14 102.36 395.28 229.46 178.22 217.23 118.23 281.61 231.89 210.64 17.52 180.85 227.53 200.02 211.44 48 ER14d ExonRegion 0 51.08 85.07 49.87 73.22 72.58 109.44 74.30 38.31 36.37 47.40 135.29 112.82 107.82 100.79 70.23 60.82 78.85 25.32 3.12 51.02 38.76 99.71 42.06 49 E14_Dc NovelBoundary 0 0.00 17.69 11.32 14.75 22.41 20.44 6.14 18.11 17.79 10.83 4.84 6.30 6.82 2.47 13.35 15.72 17.95 1.58 8.09 26.27 3.15 7.96 15.45 50 I14_SR2 SilentIntronRegion 0 4.87 14.24 2.48 25.00 20.37 30.50 15.76 11.20 14.51 7.58 3.48 9.33 5.52 1.91 9.54 6.54 7.34 2.75 0.00 17.52 0.00 7.25 5.74 51 I14_AR3 ActiveIntronRegion 0 13.12 33.50 15.46 30.24 22.91 31.80 13.36 22.66 11.37 15.00 7.05 8.14 10.07 2.74 6.80 5.38 4.73 2.71 0.50 11.91 0.35 14.02 3.29 52 ER15a ExonRegion 0 4.66 45.94 2.10 21.81 8.27 49.08 7.59 18.91 38.69 10.26 0.65 0.22 5.65 1.46 1.75 1.40 0.34 6.07 0.00 10.94 1.44 2.79 0.09 53 E15a_E16a KnownJunction 0 0.00 6.45 5.09 23.61 10.10 56.84 1.68 24.52 36.37 17.97 0.00 0.00 6.17 0.00 4.45 0.00 0.00 0.00 0.00 18.54 0.00 0.00 0.00 54 ER16a ExonRegion 0 4.10 19.35 7.82 12.32 8.89 39.62 3.36 18.48 27.09 9.64 0.49 0.60 2.01 1.09 2.27 0.75 0.00 4.26 0.00 10.06 0.37 1.41 1.24