Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 DDX6 Gene 0 63.99 185.77 78.74 173.72 141.71 277.46 128.39 119.53 139.18 159.62 183.63 195.88 314.28 204.31 100.93 229.76 290.29 198.56 160.15 283.05 150.93 192.06 162.84 2 264018 Transcript 0 66.55 260.94 69.44 168.40 139.43 297.56 157.54 127.90 191.88 207.40 265.83 331.33 564.93 308.74 157.10 354.69 475.07 329.61 214.34 503.42 253.38 265.37 230.97 3 IG33_AR3 ActiveIntergenicRegion 0 12.03 5.82 5.35 6.17 7.36 2.34 2.74 4.82 4.24 10.43 0.70 6.42 5.30 0.27 0.25 1.48 1.50 1.82 1.49 11.13 0.40 1.20 1.33 4 IG33_AR2 ActiveIntergenicRegion 0 11.67 6.40 12.79 13.95 13.89 9.19 2.65 9.16 8.07 12.49 1.93 18.27 3.37 2.74 7.47 3.96 2.93 8.28 8.43 22.89 1.32 4.17 7.83 5 ER1a ExonRegion 1 45.99 36.30 7.76 7.10 43.38 114.69 77.43 11.64 18.92 22.38 59.68 3.65 13.96 53.43 43.75 109.93 100.46 47.12 39.84 83.79 62.89 63.64 58.47 6 E1a_E2a KnownJunction 1 142.91 194.37 35.39 37.76 108.74 406.92 177.18 52.08 81.31 97.08 138.93 5.70 44.64 71.52 76.40 246.60 297.43 207.10 62.78 258.93 184.28 112.55 149.04 7 I1_AR1 ActiveIntronRegion 0 24.29 25.25 3.99 6.09 29.23 175.58 59.87 3.02 1.69 9.47 23.22 0.00 2.10 61.91 18.64 60.33 47.62 51.27 29.72 43.57 54.76 34.84 50.27 8 ER2a ExonRegion 0 60.68 132.64 91.33 149.89 117.05 276.19 120.56 128.03 191.76 193.50 280.90 250.41 418.16 266.71 145.45 304.00 421.37 337.71 185.76 472.59 284.53 246.28 205.26 9 E2_Da NovelBoundary 0 28.82 14.14 33.00 53.24 3.90 2.33 18.37 21.89 15.25 3.76 8.90 11.85 6.82 2.12 13.35 10.42 16.83 3.48 4.05 5.18 0.00 2.45 0.00 10 E2a_E3a KnownJunction 0 49.42 184.97 67.41 153.26 140.92 262.46 111.33 124.87 201.65 173.39 223.74 257.33 464.42 256.05 138.45 278.82 482.56 286.32 255.44 564.39 241.86 324.66 224.76 11 I2 Intron 0 19.74 10.75 10.43 22.76 18.19 8.31 13.38 10.25 6.54 5.24 1.76 4.68 8.58 2.44 5.82 5.22 4.18 4.03 4.17 9.69 1.12 2.41 4.76 12 I2_AR1 ActiveIntronRegion 0 34.19 7.01 13.65 30.47 15.92 9.86 17.06 8.17 11.22 6.62 7.75 10.91 13.92 4.75 9.49 6.93 6.09 3.43 5.18 15.27 1.01 2.21 5.35 13 I2_AR2 ActiveIntronRegion 0 25.25 12.50 14.20 33.54 25.84 5.71 18.67 12.48 8.99 5.15 2.34 8.21 10.52 3.90 5.42 7.29 5.77 4.44 5.30 10.67 0.89 2.11 5.74 14 I2_AR3 ActiveIntronRegion 0 30.35 12.83 11.59 11.71 11.14 5.33 6.85 10.77 4.48 4.68 0.31 4.65 3.15 1.28 2.86 1.45 2.69 2.24 3.11 5.11 0.00 0.93 0.48 15 I2_AR4 ActiveIntronRegion 0 18.27 16.35 7.88 16.32 18.88 6.83 18.94 12.13 10.47 7.04 1.52 2.00 15.64 0.79 3.95 4.08 2.59 1.64 1.87 10.43 0.00 1.63 2.88 16 E3_Aa NovelBoundary 0 44.97 18.29 14.16 48.45 35.06 24.08 36.74 35.57 11.72 11.82 2.21 12.60 21.75 7.42 0.00 4.36 0.00 7.92 9.60 23.33 2.72 5.33 4.18 17 ER3a ExonRegion 0 46.27 188.17 70.48 149.32 125.22 286.99 114.21 137.57 195.82 200.96 258.62 299.68 385.39 311.25 168.77 353.40 472.39 263.33 173.05 501.00 208.49 258.55 197.12 18 E3a_E4a KnownJunction 0 37.04 193.98 95.41 177.87 157.39 305.68 177.49 153.62 228.33 246.83 228.74 337.01 312.80 310.73 165.40 356.06 563.53 303.98 143.53 642.05 171.93 240.59 230.48 19 ER4a ExonRegion 0 58.34 170.67 69.18 172.23 128.08 250.74 147.12 136.50 207.21 211.78 286.05 387.05 458.28 322.70 138.02 365.18 609.72 378.67 194.06 556.53 224.88 247.03 247.96 20 E4_Da NovelBoundary 0 9.71 33.42 17.00 22.37 16.13 0.00 14.31 36.23 14.55 7.01 2.68 0.00 6.82 0.00 8.90 0.00 4.49 0.00 0.00 26.59 0.00 0.00 24.16 21 E4a_E5a KnownJunction 0 36.08 164.05 70.22 146.80 117.32 201.47 97.03 110.82 169.67 227.41 257.70 381.87 651.26 318.56 198.78 424.33 631.32 368.77 214.22 466.92 260.08 272.67 314.82 22 I4 Intron 0 21.74 9.94 7.54 13.68 13.45 4.99 10.39 8.90 6.25 4.63 0.64 2.48 6.98 0.46 6.45 3.51 5.00 2.36 3.80 13.16 1.26 0.69 4.14 23 I4_SR1 SilentIntronRegion 0 21.75 9.94 7.55 13.69 13.45 4.99 10.40 8.90 6.26 4.63 0.64 2.48 6.98 0.46 6.45 3.51 5.00 2.37 3.80 13.17 1.27 0.69 4.15 24 E5_Aa NovelBoundary 0 30.01 32.82 8.34 39.02 15.79 0.00 9.89 4.35 10.56 7.71 0.00 0.00 13.64 0.00 0.00 4.27 0.00 3.23 9.13 20.39 2.84 2.51 0.00 25 ER5a ExonRegion 0 52.26 157.74 67.46 153.61 104.99 224.94 120.95 112.19 200.97 196.21 270.78 330.14 411.14 368.83 186.60 404.39 589.34 508.43 264.34 572.91 330.73 247.04 304.67 26 E5a_E6a KnownJunction 0 44.01 192.93 31.31 105.35 56.71 285.74 105.55 92.13 170.69 176.27 280.28 299.95 397.38 399.26 124.24 365.29 501.26 399.82 281.61 537.61 366.65 278.49 209.14 27 E5a_E7a NovelJunction 0 3.78 15.66 3.25 9.09 12.99 0.00 0.00 2.01 9.81 5.61 7.32 18.31 12.50 12.77 13.35 18.97 11.13 8.87 4.80 5.43 8.71 19.78 8.28 28 I5 Intron 0 28.97 12.09 5.47 13.09 18.18 8.79 11.17 7.85 6.99 4.01 1.74 5.01 14.08 1.53 7.88 5.94 9.72 3.31 4.77 10.52 2.31 3.02 6.16 29 I5_AR1 ActiveIntronRegion 0 29.63 16.37 5.64 7.19 28.63 3.25 17.51 9.94 2.81 1.58 6.77 5.63 4.92 0.00 7.25 6.98 10.56 1.62 6.53 12.77 3.91 3.96 2.13 30 I5_AR2 ActiveIntronRegion 0 36.85 20.07 14.28 17.45 24.55 4.66 16.41 20.25 7.38 3.44 4.62 13.08 20.29 0.00 14.51 5.30 27.34 2.93 18.00 19.24 6.18 8.29 12.00 31 I5_SR1 SilentIntronRegion 0 46.80 21.28 4.39 16.81 12.28 6.40 10.48 5.21 7.68 3.24 1.32 4.99 11.01 0.71 7.58 4.47 6.67 3.17 8.28 9.40 0.97 2.39 8.76 32 I5_AR3 ActiveIntronRegion 0 16.67 5.57 7.83 17.62 15.96 8.28 8.98 11.12 11.27 6.50 2.34 6.23 22.60 1.52 9.24 2.56 6.00 3.85 1.58 10.24 0.27 3.00 6.65 33 I5_SR2 SilentIntronRegion 0 32.92 12.09 2.92 5.57 29.37 12.58 15.44 4.71 2.95 3.13 0.00 2.62 8.33 2.73 3.67 11.56 13.59 2.94 2.91 9.73 6.55 0.48 0.67 34 I5_AR4 ActiveIntronRegion 0 16.87 7.54 0.97 4.32 8.53 12.66 6.33 2.74 0.00 0.00 1.03 1.89 4.10 2.28 10.43 9.47 13.99 3.43 5.08 11.30 1.17 7.79 9.36 35 ER6a ExonRegion 0 51.46 285.66 50.35 134.37 90.48 231.84 112.05 87.29 182.36 188.58 273.96 313.28 421.18 365.68 182.70 371.50 528.70 494.08 256.84 527.86 339.81 235.24 264.12 36 E6a_E7a KnownJunction 0 69.20 415.39 31.05 140.51 118.76 241.28 129.31 97.39 209.20 183.31 319.66 192.21 376.11 254.28 199.02 361.10 505.84 388.92 240.29 577.62 302.52 319.15 222.80 37 I6 Intron 0 31.77 10.17 9.43 16.55 18.35 11.54 13.03 12.26 9.06 8.55 4.06 6.41 16.56 2.14 8.48 5.76 10.92 7.86 7.72 16.48 2.85 3.19 6.16 38 I6_AR1 ActiveIntronRegion 0 16.05 9.48 5.41 10.84 42.31 14.41 24.60 11.56 8.46 0.81 1.17 2.11 11.34 1.02 9.01 3.53 10.21 5.56 5.67 6.23 1.43 2.47 3.65 39 I6_AR2 ActiveIntronRegion 0 33.26 4.07 5.78 16.55 38.61 6.55 15.70 13.09 9.53 2.29 3.59 0.00 32.16 1.62 9.95 0.00 8.49 2.90 0.00 15.50 6.61 0.00 5.87 40 I6_SR1 SilentIntronRegion 0 22.96 1.86 5.03 10.61 18.09 2.39 7.08 7.48 4.94 1.87 3.66 0.00 29.87 0.56 4.23 0.00 5.09 0.28 0.00 11.66 3.50 0.00 1.92 41 I6_AR4 ActiveIntronRegion 0 50.72 13.14 15.36 25.54 16.38 14.86 15.61 17.09 12.43 13.98 5.61 9.77 19.92 2.75 11.84 9.14 13.90 12.05 10.04 21.63 3.53 4.72 9.97 42 ER7a ExonRegion 0 46.25 344.34 48.07 168.18 116.38 301.32 158.85 110.17 179.56 193.54 252.56 337.52 462.04 256.92 160.76 322.08 426.86 336.78 198.90 495.41 224.62 263.20 207.30 43 E7a_E8a KnownJunction 0 35.71 332.90 51.89 190.22 142.87 283.02 172.10 134.23 210.65 230.10 277.54 433.49 610.67 297.13 158.72 378.11 468.91 309.82 169.13 548.92 178.91 244.93 258.31 44 I7 Intron 0 14.91 12.56 14.30 28.99 13.74 11.33 14.06 12.77 15.38 9.67 1.35 4.79 9.56 2.34 11.10 6.98 10.63 5.21 5.54 15.18 0.19 7.07 5.62 45 I7_SR1 SilentIntronRegion 0 14.93 12.58 14.32 29.03 13.76 11.35 14.08 12.80 15.41 9.68 1.35 4.80 9.57 2.34 11.11 7.00 10.65 5.22 5.55 15.21 0.19 7.08 5.63 46 I7 Intron 0 15.51 8.56 6.55 15.52 11.27 13.73 11.36 6.43 6.32 5.33 2.11 1.03 5.55 1.25 7.75 1.85 5.15 1.01 4.97 12.28 3.78 6.82 4.58 47 I7_SR1 SilentIntronRegion 0 13.31 5.68 2.55 5.68 13.09 19.22 10.17 3.60 0.00 1.19 1.35 0.00 5.40 0.00 6.32 2.08 9.22 0.00 4.45 10.41 7.70 2.91 6.15 48 I7_SR2 SilentIntronRegion 0 16.21 9.43 7.73 18.41 10.79 12.20 11.74 7.27 8.16 6.55 2.34 1.33 5.62 1.62 8.19 1.80 3.99 1.30 5.14 12.87 2.67 7.98 4.14 49 ER8a ExonRegion 0 69.97 277.33 91.63 287.36 164.50 247.95 154.16 177.27 257.61 262.96 322.45 471.21 614.85 307.76 213.87 425.13 546.85 307.04 254.16 651.81 164.17 370.53 262.01 50 E8_Da NovelBoundary 0 33.49 14.93 25.04 30.83 11.71 14.71 9.19 14.50 12.90 5.05 4.84 6.30 14.45 4.71 13.35 3.93 3.74 4.44 4.61 18.09 2.97 2.69 3.93 51 E8a_E9a KnownJunction 0 70.61 374.28 102.89 249.02 243.72 281.09 200.28 163.47 224.74 251.56 275.75 530.57 514.25 270.82 131.16 371.53 446.10 189.98 188.99 641.09 193.49 337.52 181.74 52 E8a_E10a NovelJunction 0 0.00 2.50 0.00 0.00 0.00 0.00 0.00 0.00 1.79 2.31 0.00 0.00 6.49 2.47 0.00 7.01 16.64 6.34 0.00 6.07 0.00 6.25 15.37 53 I8 Intron 0 17.25 9.49 12.89 25.23 27.67 15.50 16.18 12.80 10.98 6.97 3.65 6.38 13.55 4.46 10.32 14.77 13.13 10.05 7.60 16.08 4.16 6.21 4.38 54 I8_AR1 ActiveIntronRegion 0 17.32 9.53 12.94 25.33 27.77 15.56 16.24 12.85 11.02 6.99 3.67 6.41 13.59 4.48 10.36 14.83 13.18 10.09 7.63 16.14 4.18 6.24 4.40 55 ER9a ExonRegion 0 84.61 464.95 90.22 199.51 159.13 378.08 190.94 143.10 200.64 214.04 276.75 389.32 709.87 258.56 144.21 318.41 494.85 244.38 198.31 500.79 241.78 249.52 213.21 56 E9_Da NovelBoundary 0 36.30 20.06 35.45 31.83 56.37 19.70 20.93 12.03 13.89 17.57 2.00 12.60 27.11 5.18 17.80 18.80 21.69 19.73 3.67 16.11 5.56 0.00 0.00 57 E9a_E10a KnownJunction 0 94.54 401.44 103.93 214.59 123.43 229.58 171.13 158.05 200.52 219.87 263.70 300.70 720.24 358.23 234.25 361.70 464.05 287.27 238.03 453.05 272.38 270.84 179.26 58 I9 Intron 0 19.37 7.37 6.27 14.52 23.98 15.03 17.42 7.61 8.07 5.38 2.40 8.45 22.69 4.49 7.04 7.96 6.61 5.00 6.68 12.17 3.36 5.36 10.64 59 I9_SR1 SilentIntronRegion 0 19.44 7.39 6.29 14.57 24.07 15.09 17.48 7.64 8.10 5.40 2.40 8.48 22.76 4.51 7.07 7.99 6.63 5.02 6.71 12.22 3.37 5.38 10.67 60 ER10a ExonRegion 0 63.93 295.53 71.89 189.27 151.63 273.06 165.18 133.52 196.63 253.05 327.29 450.45 806.48 364.30 153.37 386.45 537.65 296.62 209.64 561.59 278.74 285.71 233.15 61 E10a_E11a KnownJunction 0 69.64 257.32 69.99 188.55 184.30 326.57 182.83 150.37 211.34 232.17 305.02 346.31 768.78 336.98 130.05 406.99 486.49 345.47 290.46 624.85 249.21 273.71 307.48 62 ER11a ExonRegion 0 87.60 263.06 72.72 212.06 176.47 399.54 198.51 174.90 242.64 280.53 363.23 457.16 953.40 421.61 166.41 414.24 540.73 442.77 309.63 603.56 346.53 330.56 296.00 63 E11a_E12a KnownJunction 0 118.69 400.78 82.67 215.52 218.59 572.68 256.63 162.24 246.90 304.88 377.41 425.69 933.87 572.08 316.83 524.48 565.87 460.63 325.84 643.33 345.77 337.95 305.60 64 ER12a ExonRegion 0 71.82 296.03 73.43 166.66 138.27 373.70 202.29 126.13 185.01 230.53 295.45 389.74 867.47 365.49 151.89 396.25 480.44 379.55 249.40 505.15 288.53 259.07 244.46 65 E12a_E13a KnownJunction 1 58.31 247.46 64.49 156.09 155.01 354.23 168.70 133.29 218.63 219.95 254.80 549.18 1218.75 334.45 130.42 332.82 464.05 427.18 241.51 517.79 344.59 302.49 257.80 66 ER13a ExonRegion 0 91.59 288.92 95.57 184.38 153.95 326.79 198.86 148.60 206.67 222.69 265.36 335.45 626.36 369.63 145.06 374.34 486.71 336.78 253.12 434.51 333.82 279.07 266.35 67 E13a_E14a KnownJunction 0 75.87 314.62 86.81 217.39 177.67 318.91 221.21 175.10 222.08 223.01 293.34 325.46 860.33 358.59 157.24 439.63 496.96 410.02 207.91 450.36 296.59 346.40 258.22 68 I13_AR1 ActiveIntronRegion 0 19.15 10.78 6.64 22.28 25.41 10.76 11.15 8.19 7.82 3.62 2.17 7.09 17.22 3.82 4.81 15.32 9.17 5.31 13.68 12.97 0.75 2.70 6.03 69 I13_AR2 ActiveIntronRegion 0 28.12 14.83 7.99 22.61 13.46 10.43 8.35 10.51 5.07 6.34 3.15 15.58 14.53 2.77 5.83 8.74 7.73 8.08 5.47 13.12 0.00 0.18 7.89 70 ER14a ExonRegion 0 64.12 169.56 81.42 179.87 149.72 278.75 121.71 118.67 119.23 143.33 147.78 145.31 231.02 164.49 79.82 184.00 216.40 140.87 140.34 197.90 103.45 167.54 136.55