Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 USP28 Gene 0 91.47 74.06 43.76 65.35 55.93 71.67 38.23 32.42 28.87 38.45 167.27 72.43 134.64 144.59 78.84 147.36 129.31 62.59 41.88 50.03 53.71 85.64 74.54 2 260188 Transcript 1 83.79 58.02 44.35 39.52 33.62 15.10 22.66 24.89 23.99 13.40 172.94 33.76 93.18 168.29 38.82 182.17 133.89 83.94 25.98 17.07 51.58 77.83 124.63 3 3302 Transcript 0 2.55 56.18 7.94 26.74 17.67 39.85 4.91 21.52 13.04 20.12 4.94 0.00 0.02 5.59 1.84 1.69 1.79 28.44 1.27 20.72 2.50 2.03 2.73 4 ER1a ExonRegion 0 11.45 9.22 2.25 1.14 2.65 21.78 10.71 1.56 0.10 0.79 28.37 0.00 4.22 26.56 15.38 35.20 14.05 3.80 0.25 15.22 9.04 7.55 16.48 5 E1a_E2a KnownJunction 0 6.30 0.00 8.60 2.93 3.74 5.62 12.50 0.00 1.10 1.10 17.16 0.00 0.00 10.18 0.00 8.72 16.74 9.78 3.58 3.26 2.59 7.53 0.00 6 ER2a ExonRegion 1 2.66 1.51 6.58 3.37 0.45 9.05 4.96 3.12 5.72 6.88 52.01 17.37 14.97 41.64 13.61 14.10 54.13 6.30 8.25 20.87 29.41 6.09 11.67 7 E2a_E3a KnownJunction 1 3.78 2.70 5.26 6.73 0.00 7.78 0.00 6.70 13.02 15.82 78.18 44.11 27.60 68.10 15.45 28.62 136.42 16.33 3.95 38.35 48.93 21.43 27.15 8 ER3a ExonRegion 0 2.75 10.58 7.69 15.01 8.35 9.91 3.47 8.19 12.13 10.44 99.26 31.38 48.42 86.85 25.15 91.73 93.57 47.33 17.03 38.11 27.59 33.32 49.17 9 E3a_E4a KnownJunction 0 3.11 29.21 8.07 29.73 46.77 40.37 16.30 4.72 11.92 16.82 112.13 46.67 85.71 107.48 39.80 98.26 112.58 45.72 13.27 46.08 38.92 34.78 47.80 10 ER4a ExonRegion 0 10.62 28.39 9.02 21.96 28.37 54.30 30.43 13.63 17.83 16.93 151.70 60.08 71.06 123.26 37.80 92.47 125.78 49.87 19.29 41.49 48.86 43.40 51.09 11 E4a_E5a KnownJunction 1 30.82 41.18 13.84 17.45 19.95 73.82 32.81 12.40 18.72 22.19 151.25 18.91 125.64 131.62 58.84 126.12 123.24 39.67 27.95 63.66 72.90 64.30 66.33 12 ER5a ExonRegion 0 13.88 32.51 15.36 28.36 19.42 29.70 19.40 11.85 20.88 23.78 170.30 55.12 114.47 162.86 54.38 128.82 134.80 59.15 23.61 56.64 77.06 75.58 63.30 13 E5a_E6a KnownJunction 0 16.00 27.30 19.10 35.33 37.52 30.15 30.52 20.66 18.95 40.45 140.25 22.96 66.55 121.90 58.59 92.88 121.27 47.96 31.44 59.32 70.06 65.76 41.74 14 ER6a ExonRegion 0 25.30 41.54 14.63 27.51 29.09 59.50 33.72 17.05 20.63 34.14 153.39 62.70 132.67 174.06 57.19 126.50 149.87 52.71 26.00 49.18 57.93 75.27 49.99 15 E6a_E7a KnownJunction 1 24.30 45.45 7.63 25.04 35.91 56.05 32.50 21.60 21.53 30.76 139.93 75.02 116.71 180.59 43.27 108.18 95.56 56.92 22.21 48.32 50.47 91.42 66.16 16 ER7a ExonRegion 0 25.49 33.51 18.96 26.81 25.28 48.10 38.16 14.83 16.99 25.80 161.37 52.20 160.00 153.15 60.02 124.57 115.46 58.03 25.88 32.62 57.54 59.64 52.99 17 E7_Da NovelBoundary 0 9.93 22.04 5.09 13.98 19.02 14.65 23.10 3.86 8.42 12.60 14.74 12.60 20.29 16.83 4.45 3.50 12.06 1.58 9.04 20.90 16.74 32.27 7.68 18 E7a_E8a KnownJunction 0 3.33 24.54 9.37 12.45 20.03 26.29 21.29 3.94 8.68 13.59 131.72 57.92 161.84 134.68 38.57 151.07 110.43 52.40 26.35 36.94 60.42 58.78 35.51 19 I7 Intron 0 18.55 14.46 6.34 12.54 9.59 9.91 12.78 2.98 4.47 5.84 7.99 9.83 21.60 11.43 10.81 11.96 10.56 7.39 4.57 12.20 4.98 8.04 8.91 20 I7_SR1 SilentIntronRegion 0 18.59 14.50 6.36 12.57 9.61 9.93 12.80 2.99 4.47 5.86 8.01 9.85 21.64 11.44 10.83 11.99 10.58 7.41 4.58 12.23 4.99 8.06 8.92 21 E8_Aa NovelBoundary 0 9.93 40.52 12.30 23.87 14.94 32.48 7.15 4.27 2.43 7.68 5.05 0.00 26.46 4.71 4.45 12.30 22.25 1.78 4.42 13.68 8.28 5.69 7.77 22 ER8a ExonRegion 1 8.64 18.30 11.43 16.13 21.37 17.99 20.61 3.62 9.51 14.49 149.62 79.39 102.17 133.46 31.87 119.37 108.17 54.03 21.09 39.28 53.72 65.41 47.34 23 E8_Da NovelBoundary 0 20.30 12.96 8.13 36.26 8.23 6.64 19.56 4.48 9.98 9.08 19.48 25.06 12.82 13.71 15.70 23.75 17.58 7.21 9.32 9.08 0.00 15.25 11.78 24 E8a_E9a KnownJunction 1 14.15 9.08 14.87 12.99 4.16 13.80 25.48 9.36 14.99 12.68 103.39 65.87 101.45 128.20 13.60 108.35 55.17 25.49 20.42 17.07 49.98 49.05 54.21 25 E9_Aa NovelBoundary 0 9.71 5.66 8.90 20.94 16.64 24.99 10.73 9.86 9.78 5.83 24.16 0.00 33.28 21.48 25.47 14.53 7.48 9.37 0.00 23.84 6.05 14.14 0.00 26 ER9a ExonRegion 1 21.60 20.20 16.18 11.04 18.66 51.82 23.26 7.56 15.69 15.88 140.42 86.20 115.12 165.24 41.07 144.86 136.07 63.78 34.29 38.91 58.27 45.00 51.56 27 E9a_E10a KnownJunction 1 22.82 37.43 15.82 9.22 45.08 50.37 23.98 3.82 24.80 20.68 159.46 74.87 132.95 182.06 40.42 149.45 140.81 89.46 29.27 67.24 58.94 60.80 60.10 28 ER10a ExonRegion 0 28.04 37.03 17.16 27.06 28.21 56.15 34.63 14.13 22.91 20.37 160.43 88.39 116.31 170.50 49.32 150.62 145.66 64.31 30.34 49.91 77.28 62.30 72.81 29 E10_Da NovelBoundary 0 11.34 12.23 1.69 1.66 8.15 5.74 4.42 2.42 4.25 3.92 6.95 12.30 6.66 14.48 8.90 15.98 13.09 14.47 8.94 23.59 3.09 0.00 20.23 30 E10a_E11a KnownJunction 0 19.04 8.75 13.13 13.25 20.54 23.62 25.70 5.26 13.19 18.80 147.98 56.72 124.50 159.10 65.89 122.02 159.05 45.68 16.28 42.95 89.14 49.17 41.49 31 I10_AR2 ActiveIntronRegion 0 7.01 13.26 5.17 12.83 10.04 12.98 12.26 5.88 3.46 3.26 9.29 12.09 38.31 11.90 6.48 7.49 5.87 1.06 0.83 15.31 3.21 5.28 4.69 32 E11_Aa NovelBoundary 0 14.22 24.54 2.93 14.35 6.79 12.89 24.07 4.35 4.34 5.08 6.69 24.31 31.49 11.95 12.36 0.00 8.98 1.87 9.32 8.88 2.90 17.51 4.35 33 ER11a ExonRegion 0 35.83 34.81 16.02 33.43 38.00 55.97 28.74 25.72 19.43 23.21 175.82 65.48 141.80 158.28 49.59 131.17 136.86 60.50 38.35 48.15 58.00 82.46 70.36 34 E11a_E12a KnownJunction 0 22.74 43.08 22.12 55.87 50.76 43.33 39.53 22.71 19.30 36.42 212.26 64.07 104.21 143.03 35.48 117.06 119.87 45.31 50.07 38.93 54.55 81.38 69.74 35 ER12a ExonRegion 0 39.18 47.41 23.05 39.92 40.78 54.10 35.72 27.39 16.94 30.56 169.63 82.26 144.76 144.11 46.21 145.51 114.84 52.80 28.87 46.08 41.87 93.54 82.35 36 E12a_E13a KnownJunction 0 41.56 67.62 9.79 25.30 55.77 34.01 31.22 27.85 26.56 28.04 194.79 91.53 112.01 137.27 37.09 152.61 146.24 54.80 49.79 28.32 41.33 131.47 95.09 37 E12a_E14a NovelJunction 0 16.74 2.83 1.36 4.10 0.00 2.16 7.99 0.00 0.00 0.00 13.79 0.00 0.00 4.94 0.00 3.59 4.21 6.26 0.00 0.00 0.00 0.00 0.00 38 I12_SR1 SilentIntronRegion 0 11.86 12.71 6.51 11.01 12.39 11.47 10.49 3.22 1.88 5.30 8.14 14.79 33.92 8.70 7.39 9.09 9.64 6.94 4.57 11.32 3.57 5.69 4.22 39 I12_AR4 ActiveIntronRegion 0 10.41 14.52 5.16 15.14 7.61 9.93 5.02 5.07 5.15 6.89 9.15 10.67 18.82 11.59 9.95 20.50 11.51 16.61 8.45 14.18 11.39 4.48 7.70 40 I12_AR5 ActiveIntronRegion 0 8.82 11.00 7.47 19.41 7.27 8.64 5.61 5.87 4.27 6.72 10.56 5.62 17.38 12.93 10.11 21.64 16.33 19.85 10.04 15.60 9.30 6.23 10.54 41 I12_AR6 ActiveIntronRegion 0 0.00 13.05 9.55 7.89 14.74 12.43 6.50 4.57 2.80 3.22 14.22 3.88 6.79 5.07 7.14 13.04 3.50 7.67 3.76 9.62 8.19 3.08 15.69 42 I12_AR7 ActiveIntronRegion 0 19.69 9.46 6.29 11.54 15.21 12.32 8.44 7.99 6.34 7.95 6.99 10.36 23.48 8.99 7.38 9.73 6.26 8.55 3.29 8.43 1.90 8.26 4.55 43 E13_Aa NovelBoundary 0 37.41 39.86 11.50 11.82 62.39 19.25 9.80 5.09 6.45 13.81 14.42 0.00 12.34 15.01 4.45 20.68 12.72 21.80 3.76 14.51 5.62 5.20 0.00 44 ER13a ExonRegion 0 67.23 67.45 25.22 56.89 43.32 72.23 32.20 21.56 29.95 44.70 204.62 78.12 144.32 176.44 46.50 166.90 134.90 68.41 37.37 55.28 54.85 98.97 79.35 45 E13a_E14a KnownJunction 1 72.31 89.00 27.53 43.12 40.58 112.61 33.70 19.55 41.87 40.56 222.53 88.53 101.29 188.59 47.22 169.87 126.51 51.57 57.79 80.79 63.57 129.94 67.01 46 ER14a ExonRegion 0 53.36 54.62 38.10 64.68 50.95 83.73 37.88 37.07 36.72 42.57 232.20 99.00 165.14 185.48 63.16 170.12 184.36 66.45 49.21 69.74 50.88 107.49 80.43 47 E14a_E15a KnownJunction 0 74.68 46.83 55.85 51.97 38.29 102.72 60.86 35.98 34.95 48.43 301.71 67.82 206.48 204.55 98.52 148.85 226.09 54.26 33.70 66.15 67.58 98.10 101.84 48 E15_Aa NovelBoundary 0 0.00 0.00 4.23 1.86 0.00 0.00 17.00 2.55 0.00 1.56 2.26 0.00 0.00 0.00 0.00 8.20 4.39 4.06 0.00 2.88 0.00 2.88 0.00 49 ER15a ExonRegion 0 69.25 54.76 37.73 51.87 43.26 59.84 35.45 23.98 30.91 42.97 238.51 92.81 188.92 199.22 68.04 165.27 177.09 64.80 50.47 69.70 68.10 82.46 95.01 50 E15a_E16a KnownJunction 0 53.86 57.56 35.27 79.08 15.03 79.44 19.96 27.60 29.43 49.64 176.78 92.73 116.39 172.47 55.50 171.75 118.09 81.58 53.46 68.33 53.56 104.46 99.87 51 ER16a ExonRegion 0 61.40 61.35 37.59 83.73 46.25 73.21 32.27 44.07 38.87 51.02 237.97 115.48 177.55 199.81 68.98 214.43 153.15 90.68 54.49 70.52 72.52 105.14 97.36 52 E16a_E17a KnownJunction 0 76.31 73.28 39.44 96.79 28.69 111.58 30.56 37.71 55.84 49.37 179.84 87.48 147.07 187.24 60.20 149.79 145.39 68.77 44.14 43.98 91.43 74.64 83.14 53 ER17a ExonRegion 0 50.55 64.04 57.31 80.51 47.29 62.69 31.51 31.45 38.01 48.61 172.34 102.24 128.02 180.83 69.21 194.86 154.68 98.30 48.43 60.33 85.37 83.82 98.32 54 E17a_E18a KnownJunction 0 47.71 61.57 74.51 80.34 43.80 57.01 35.77 24.93 35.36 45.61 126.98 79.98 68.18 179.12 79.49 196.44 161.01 116.07 83.96 48.00 74.19 103.67 111.91 55 ER18a ExonRegion 0 67.96 78.42 52.03 56.64 40.06 55.76 35.43 24.48 30.28 38.62 184.19 54.46 101.84 160.31 57.78 158.31 143.85 85.70 41.64 53.05 98.10 85.14 98.48 56 E18a_E19a KnownJunction 0 0.00 26.05 4.91 14.72 4.33 23.51 0.00 17.29 5.01 14.32 2.53 0.00 0.00 7.42 0.00 0.00 0.00 24.33 0.00 18.41 3.15 3.06 0.00 57 E18a_E20a KnownJunction 1 83.79 58.02 44.35 39.52 33.62 15.10 22.66 24.89 23.99 13.40 172.94 33.76 93.18 168.29 38.82 182.17 133.89 83.94 25.98 17.07 51.58 77.83 124.63 58 I18_AR1 ActiveIntronRegion 0 3.79 21.44 4.07 16.65 7.98 31.53 15.96 7.70 6.66 10.19 6.46 0.00 7.16 7.78 3.10 7.43 10.71 19.92 4.28 8.21 4.97 0.99 2.81 59 ER19a ExonRegion 0 3.88 46.01 5.00 27.37 9.64 33.79 6.21 22.45 13.24 21.92 4.45 0.00 0.05 6.87 5.53 1.39 5.36 30.01 3.82 23.76 1.19 3.04 4.19 60 E19a_E20a KnownJunction 0 3.78 96.50 13.90 38.12 39.05 62.24 8.52 24.81 20.86 24.12 7.84 0.00 0.00 2.47 0.00 3.67 0.00 30.97 0.00 20.01 3.15 0.00 4.01 61 E20_Aa NovelBoundary 0 16.74 2.96 10.23 21.71 3.82 2.50 6.49 4.56 4.63 1.56 0.00 6.30 0.00 2.35 0.00 7.69 3.65 6.30 0.00 0.00 0.00 0.00 3.84 62 ER20a ExonRegion 0 113.30 137.81 51.62 77.68 56.58 75.30 46.56 37.35 33.18 44.56 212.25 50.19 101.27 172.94 80.05 162.77 133.11 79.88 60.47 60.11 76.01 94.08 97.98 63 E20a_E21a KnownJunction 0 134.62 147.47 65.93 104.12 60.10 100.51 42.93 28.51 40.86 51.68 185.73 80.28 178.40 174.76 68.24 203.45 126.79 56.00 44.33 60.59 45.78 101.53 108.58 64 ER21a ExonRegion 0 106.79 127.86 60.40 90.83 77.33 102.51 46.86 32.69 44.00 44.87 202.76 82.86 135.89 158.71 88.73 168.32 121.09 61.14 52.22 68.27 39.81 86.29 97.36 65 E21a_E22a KnownJunction 0 123.28 142.08 64.04 83.17 123.43 127.88 58.16 36.31 37.85 43.33 196.15 57.02 163.14 149.57 96.42 144.66 131.00 71.42 29.27 69.61 43.43 115.12 77.94 66 I21 Intron 0 5.76 16.44 3.47 9.72 4.20 3.48 6.45 4.25 2.28 2.40 6.70 3.66 17.10 3.98 1.62 6.62 3.81 2.28 0.53 4.74 0.73 7.74 1.45 67 I21_AR1 ActiveIntronRegion 0 4.80 18.48 3.45 9.41 3.57 3.23 5.64 3.82 3.09 2.28 8.35 4.32 18.12 3.62 1.82 5.42 4.09 2.45 0.92 5.60 1.27 7.81 1.69 68 E22_Aa NovelBoundary 0 6.82 9.67 9.96 13.09 0.00 4.66 17.62 16.47 5.38 4.67 13.64 0.00 0.00 7.30 4.45 8.72 13.28 2.57 0.00 0.00 0.00 23.76 3.67 69 ER22a ExonRegion 0 135.35 126.21 56.49 78.16 94.89 76.13 36.72 34.20 36.59 45.58 237.92 60.45 112.62 144.45 83.92 156.89 121.72 70.12 68.53 55.05 53.88 111.68 85.46 70 E22a_E23a KnownJunction 0 209.52 146.88 75.37 117.97 39.39 69.45 25.57 37.99 45.66 46.31 215.95 103.53 128.56 177.47 129.80 287.87 163.53 95.38 113.89 69.03 50.60 126.32 141.96 71 E23_Aa NovelBoundary 0 52.60 49.00 2.93 15.82 17.32 8.69 3.44 10.64 2.43 2.23 4.95 6.30 19.97 23.37 8.90 15.89 3.93 20.31 8.75 3.26 2.66 8.82 4.18 72 ER23a ExonRegion 0 123.15 110.98 52.38 77.99 48.42 92.41 38.99 30.32 38.70 43.02 205.37 83.90 151.44 185.23 83.64 213.99 152.27 77.34 77.96 45.56 62.02 120.69 102.59 73 E23a_E24a KnownJunction 0 174.92 118.07 33.59 84.34 114.69 151.22 69.07 53.56 25.40 46.52 245.90 67.97 189.60 155.63 149.58 177.47 150.63 61.52 48.85 54.14 45.22 111.32 99.45 74 E23a_E25a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.63 0.00 0.00 5.36 5.93 0.00 0.00 0.00 0.00 0.00 0.00 8.63 4.01 75 I23_SR2 SilentIntronRegion 0 24.75 1.33 0.00 1.47 9.52 3.35 7.64 0.00 0.00 1.19 4.91 2.75 3.07 6.12 3.57 5.83 6.03 0.00 0.00 0.00 3.86 6.65 3.95 76 ER24a ExonRegion 0 131.85 129.81 71.43 102.92 89.73 131.21 57.92 47.23 38.23 60.05 245.37 96.93 204.45 192.34 109.08 235.83 211.93 104.61 83.53 67.27 70.23 148.49 117.90 77 E24a_E25a KnownJunction 0 80.09 75.32 79.39 82.64 103.40 169.56 23.27 41.81 34.78 53.70 208.32 118.54 237.16 215.85 141.17 152.61 241.33 77.77 45.93 54.14 61.72 136.55 94.50 78 E25_Aa NovelBoundary 0 10.30 0.00 8.43 0.00 28.27 2.61 2.25 2.18 1.16 3.01 4.84 0.00 0.00 9.95 9.77 3.33 3.74 0.00 0.00 3.26 0.00 0.00 3.67 79 ER25a ExonRegion 0 165.97 99.67 66.95 93.07 87.23 90.99 51.13 47.31 33.25 46.71 148.45 74.86 155.93 123.98 120.65 143.03 119.44 54.48 44.12 46.20 42.44 95.60 73.21