Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AP001767.1 Gene 0 41.56 58.48 70.02 142.33 66.49 55.81 154.76 39.79 22.61 26.56 55.59 155.32 54.33 76.55 98.30 87.97 100.45 35.44 44.47 94.65 26.24 28.51 26.50 2 501011 Transcript 0 51.67 56.69 69.07 132.51 65.41 66.20 151.77 38.08 22.39 20.68 70.67 94.66 41.41 74.09 101.66 126.77 114.21 42.86 56.54 93.95 34.29 27.26 34.28 3 ER1a ExonRegion 1 55.66 58.63 29.62 58.55 67.62 81.29 173.21 12.44 8.26 8.27 80.63 2.41 11.73 79.84 81.98 127.59 87.33 39.04 76.72 74.44 41.27 19.97 51.94 4 E1_Da NovelBoundary 0 178.18 102.02 53.69 90.50 209.85 126.01 275.44 35.69 18.11 20.76 42.70 10.50 12.50 103.18 110.39 200.72 151.75 87.88 51.86 100.73 52.94 19.72 32.78 5 E1a_E2a KnownJunction 1 107.65 102.09 73.95 158.25 109.76 134.35 256.67 41.73 19.13 20.82 123.98 28.66 46.75 67.57 85.54 184.05 190.37 52.85 73.88 91.08 62.77 18.06 28.17 6 I1 Intron 0 20.18 16.78 26.61 27.42 20.93 15.72 45.25 13.80 6.90 12.27 7.87 13.43 12.62 29.86 32.53 46.17 33.95 31.68 22.53 25.30 13.68 4.46 11.96 7 I1_AR1 ActiveIntronRegion 0 20.26 16.85 26.72 27.53 21.01 15.78 45.44 13.86 6.93 12.32 7.90 13.48 12.67 29.97 32.65 46.37 34.10 31.81 22.62 25.41 13.74 4.48 12.01 8 E2_Aa NovelBoundary 1 90.53 26.11 51.83 67.96 12.48 15.50 84.84 40.25 18.61 17.51 18.06 33.01 62.50 57.98 30.41 68.70 88.45 27.36 32.38 23.84 16.49 20.33 21.17 9 ER2a ExonRegion 0 44.67 39.29 102.18 157.62 57.62 51.15 119.36 55.28 31.37 34.04 83.99 114.09 43.32 108.27 111.12 134.02 189.69 54.65 82.91 104.85 50.81 32.48 43.76 10 E2_Da NovelBoundary 1 29.41 38.41 64.84 63.69 38.71 20.33 94.99 21.44 12.64 33.04 7.26 18.31 62.66 34.79 60.70 107.66 43.20 69.35 60.33 77.40 13.53 16.10 7.94 11 E2a_E3a KnownJunction 1 14.08 13.22 79.80 135.41 20.37 11.58 37.45 44.20 32.58 14.00 32.53 111.34 34.09 58.51 135.36 137.91 54.98 44.98 35.95 106.23 9.02 37.72 37.65 12 I2 Intron 0 3.80 13.03 12.17 21.86 17.14 12.22 44.79 5.94 2.36 13.57 3.47 17.43 16.97 19.59 31.36 13.71 25.38 15.54 6.53 30.55 3.39 2.67 7.53 13 I2_AR1 ActiveIntronRegion 0 3.82 13.10 12.23 21.96 17.23 12.28 45.01 5.97 2.37 13.64 3.49 17.51 17.05 19.69 31.52 13.78 25.51 15.62 6.56 30.70 3.41 2.68 7.56 14 E3_Aa NovelBoundary 1 9.56 38.81 43.35 96.52 24.70 12.44 59.93 18.81 2.78 20.25 12.16 92.73 6.82 38.61 69.97 30.42 39.46 14.59 8.00 56.76 8.40 9.00 4.18 15 ER3a ExonRegion 1 36.32 70.25 59.80 152.74 71.68 52.64 172.16 36.74 20.62 26.29 32.21 216.82 71.17 56.27 94.27 50.28 48.69 22.77 13.21 93.16 7.57 28.09 9.88 16 IG5_AR1 ActiveIntergenicRegion 0 17.87 53.89 36.48 123.74 39.21 17.95 115.53 17.32 10.48 14.70 9.12 177.62 76.84 28.76 38.77 17.26 26.36 10.52 11.95 59.25 3.49 2.22 4.02 17 IG5_AR2 ActiveIntergenicRegion 0 27.54 38.40 44.19 134.04 44.72 33.11 165.59 19.05 13.54 15.22 9.71 197.98 67.29 34.22 47.89 27.34 30.27 26.59 14.41 56.46 2.99 5.80 4.15 18 IG5_SR1 SilentIntergenicRegion 0 31.29 30.21 19.68 64.53 44.51 22.23 94.11 11.09 5.53 6.78 5.50 52.08 43.41 22.07 24.83 24.92 19.46 14.04 15.51 30.54 2.60 3.27 7.94 19 IG5_AR3 ActiveIntergenicRegion 0 7.73 17.26 12.60 47.40 20.21 8.95 66.51 9.11 7.75 7.69 5.74 66.57 38.50 16.30 24.93 10.01 10.25 7.59 6.36 19.47 0.95 3.08 1.71 20 IG5_SR2 SilentIntergenicRegion 0 19.87 17.54 20.37 75.06 146.48 49.67 157.25 15.86 8.92 15.47 6.28 70.02 48.23 30.55 36.28 21.43 24.37 16.03 17.84 37.21 1.50 4.22 7.00 21 IG5_AR4 ActiveIntergenicRegion 0 47.87 35.90 15.13 54.52 332.82 134.15 421.48 11.17 4.61 10.81 2.38 76.60 73.60 24.61 32.69 15.09 13.71 6.32 5.64 29.05 0.00 3.61 2.15 22 IG5_SR5 SilentIntergenicRegion 0 78.54 34.90 10.07 39.12 37.97 22.06 119.30 12.15 4.34 5.67 4.65 54.88 35.11 21.64 32.85 29.96 24.44 11.89 17.73 70.85 6.55 3.94 4.84 23 IG5_AR7 ActiveIntergenicRegion 0 48.33 42.92 37.72 109.02 44.26 29.76 119.96 17.60 11.80 17.78 10.17 132.37 80.49 35.91 48.23 49.15 39.83 17.78 16.64 77.81 5.01 7.60 12.66 24 IG5_AR8 ActiveIntergenicRegion 0 19.41 56.08 29.69 116.72 47.01 29.85 122.39 20.15 15.12 20.98 9.48 140.71 65.41 28.75 31.23 31.04 23.05 19.28 15.27 77.66 1.75 4.99 8.31 25 IG5_SR7 SilentIntergenicRegion 0 45.36 58.24 22.04 142.84 49.04 45.66 158.03 19.19 5.45 17.08 8.43 125.85 89.76 28.67 29.46 22.50 40.29 16.15 12.41 78.94 0.00 1.40 9.97 26 IG5_AR9 ActiveIntergenicRegion 0 43.67 52.92 31.65 171.65 61.49 26.53 146.49 22.99 14.98 21.57 20.30 135.06 96.39 31.89 45.08 43.11 45.37 24.92 27.90 85.41 2.93 6.12 12.59 27 IG5_SR8 SilentIntergenicRegion 0 29.10 34.74 25.21 116.83 58.66 19.47 100.48 12.93 11.14 24.50 20.37 150.28 74.08 31.29 44.91 44.35 35.68 32.36 19.85 65.61 3.55 12.36 13.21 28 IG5_AR10 ActiveIntergenicRegion 0 24.18 27.91 8.42 40.07 40.87 13.94 45.61 4.45 7.19 6.74 12.52 24.68 23.92 23.83 20.16 39.53 32.43 19.96 12.82 35.37 7.00 5.57 8.44 29 IG5_SR9 SilentIntergenicRegion 0 54.51 56.47 47.09 171.30 67.61 34.50 133.56 25.48 12.73 22.77 20.91 101.66 81.87 42.07 47.46 63.91 39.51 43.11 30.93 84.44 4.98 7.82 11.87 30 IG5_AR11 ActiveIntergenicRegion 0 31.23 47.74 24.24 129.94 54.56 12.88 101.79 14.38 12.66 25.72 11.04 124.10 87.12 27.35 33.64 28.82 29.67 14.89 16.04 75.31 0.97 9.65 4.80 31 IG5_SR10 SilentIntergenicRegion 0 23.70 33.66 18.68 87.71 47.18 21.24 87.05 12.00 6.52 12.93 5.70 120.15 65.10 24.51 46.93 30.61 7.74 16.17 23.49 45.03 1.04 8.47 5.44 32 IG5_AR12 ActiveIntergenicRegion 0 20.46 25.42 21.24 80.86 19.62 13.75 61.56 16.13 3.71 11.47 15.46 124.11 50.03 36.54 49.32 18.33 23.11 25.56 38.22 54.96 0.00 4.17 5.87 33 IG5_SR11 SilentIntergenicRegion 0 30.12 30.96 19.12 67.72 47.21 19.11 67.12 12.94 7.88 12.69 10.20 50.65 42.95 28.01 29.52 32.16 15.58 16.49 14.52 34.68 2.94 4.21 6.35 34 IG5_AR13 ActiveIntergenicRegion 0 58.45 58.37 53.35 186.38 77.86 37.34 107.00 28.33 22.54 29.17 19.20 92.23 88.39 51.67 62.14 78.49 32.20 52.31 30.91 82.01 8.31 7.58 9.31 35 IG5_SR12 SilentIntergenicRegion 0 28.44 21.96 34.64 109.82 46.88 32.11 78.31 16.93 15.88 17.29 19.21 121.08 97.04 42.87 55.74 67.40 32.99 46.19 22.77 62.74 2.27 9.41 9.96 36 IG5_AR14 ActiveIntergenicRegion 0 9.35 2.71 5.41 17.04 4.68 2.14 24.93 6.48 6.69 7.36 2.58 28.14 29.31 14.75 11.85 17.34 6.60 14.94 2.92 12.06 0.37 1.04 2.20 37 IG5_AR16 ActiveIntergenicRegion 0 35.93 40.62 51.09 180.85 59.46 33.74 83.39 39.05 17.15 22.89 7.18 50.85 56.82 30.07 42.96 34.07 17.63 29.20 13.42 65.49 3.91 7.46 6.89 38 IG5_AR17 ActiveIntergenicRegion 0 81.30 39.92 73.42 207.77 66.17 30.45 93.71 40.52 16.02 24.97 19.92 57.64 81.17 34.39 39.53 43.39 24.18 22.73 15.17 74.48 4.45 4.91 8.22 39 IG5_AR18 ActiveIntergenicRegion 0 30.03 28.28 43.92 91.06 25.92 43.04 49.48 28.90 5.64 16.27 11.72 73.74 35.76 26.14 33.46 11.15 29.91 7.56 7.17 47.67 4.82 1.24 1.19 40 IG5_SR13 SilentIntergenicRegion 0 17.36 13.01 15.44 26.99 9.63 19.81 14.83 9.68 1.24 3.67 4.64 17.32 0.00 10.72 5.80 0.59 11.22 1.11 1.27 11.91 0.44 0.00 0.00 41 IG5_SR14 SilentIntergenicRegion 0 43.74 35.88 43.45 163.48 68.98 45.68 89.04 30.98 18.80 24.46 8.40 81.46 46.30 21.25 44.47 26.31 9.27 10.85 16.42 58.16 0.80 7.08 1.65 42 IG5_AR20 ActiveIntergenicRegion 0 44.83 38.73 77.01 206.53 42.70 22.90 60.96 33.93 13.33 24.52 10.30 90.11 53.34 20.41 55.34 36.55 13.71 22.50 22.28 61.98 2.14 6.72 1.94 43 IG5_SR15 SilentIntergenicRegion 0 9.74 13.76 5.83 35.85 22.44 4.67 25.34 6.16 3.34 4.22 5.51 22.26 13.21 10.54 12.73 17.52 9.89 10.92 8.36 19.45 3.27 1.70 3.05 44 IG5_AR22 ActiveIntergenicRegion 0 21.46 15.88 8.40 63.13 26.84 15.42 33.92 10.37 9.10 10.35 9.30 47.09 42.72 12.14 18.88 17.90 9.42 8.01 7.92 26.65 2.91 4.20 1.28 45 IG5_SR16 SilentIntergenicRegion 0 30.24 27.09 15.05 80.77 43.71 15.49 43.64 17.21 9.14 8.94 7.76 29.18 51.32 18.28 17.70 24.56 13.08 12.29 14.49 28.26 5.16 2.84 1.00 46 IG5_AR23 ActiveIntergenicRegion 0 1.54 2.22 0.11 5.58 1.46 0.00 10.95 0.94 0.90 4.17 0.00 5.51 17.48 4.72 3.17 3.51 5.70 2.02 0.00 0.77 1.60 0.00 0.00 47 IG5_SR17 SilentIntergenicRegion 0 9.93 8.10 9.03 53.18 45.78 16.26 34.80 12.15 10.44 10.20 10.58 22.65 32.07 17.15 17.80 22.21 7.78 15.28 13.31 25.25 5.69 2.53 2.49 48 IG5_AR24 ActiveIntergenicRegion 0 10.36 12.48 16.99 67.63 18.45 15.11 12.01 12.10 5.15 10.99 13.93 18.96 19.41 22.29 18.21 16.19 14.91 27.02 8.68 35.58 13.75 1.29 3.44 49 IG5_AR25 ActiveIntergenicRegion 0 19.70 18.59 10.05 66.35 25.48 7.41 22.23 10.39 8.72 10.52 8.85 22.88 20.28 14.87 16.72 16.67 12.22 21.84 9.08 29.28 5.38 2.16 2.83 50 IG5_SR18 SilentIntergenicRegion 0 8.56 14.81 3.18 21.37 5.51 1.89 9.08 0.93 1.52 5.52 0.85 16.18 9.19 5.64 9.77 3.72 4.80 3.10 4.99 11.07 1.26 0.05 0.00 51 IG5_AR27 ActiveIntergenicRegion 0 18.66 16.42 13.69 73.46 27.34 9.37 26.07 14.65 11.22 10.84 8.28 19.37 18.91 13.61 17.65 20.57 11.42 12.51 9.97 22.96 1.27 3.26 0.73 52 IG5_AR28 ActiveIntergenicRegion 0 5.64 0.58 4.43 19.99 5.48 1.57 7.63 1.32 3.06 5.46 2.12 16.91 4.02 1.86 5.94 10.33 0.00 2.90 0.00 15.20 0.00 2.48 0.00 53 IG5_SR21 SilentIntergenicRegion 0 13.41 5.49 10.61 56.75 29.21 8.20 19.61 13.93 8.12 7.04 6.51 15.75 17.02 7.07 18.26 15.41 2.40 9.96 7.52 17.40 0.80 2.46 1.07 54 IG5_AR30 ActiveIntergenicRegion 0 5.49 3.13 6.66 18.73 4.63 2.82 8.65 2.23 2.47 4.43 5.94 2.05 0.37 1.55 3.02 4.00 2.22 2.03 1.22 3.27 0.00 0.80 0.00