Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AP002004.1 Gene 0 81.97 1.35 10.48 12.08 23.72 15.83 10.97 11.36 13.87 6.66 1.28 13.28 0.76 11.13 13.15 14.67 0.67 0.16 0.00 0.00 7.06 6.86 1.87 2 412702 Transcript 0 253.16 2.37 24.80 15.63 43.36 50.77 17.88 20.06 17.41 11.56 2.13 10.38 0.19 14.33 23.32 30.36 0.50 0.56 0.00 0.00 14.21 10.12 2.04 3 ER1a ExonRegion 1 326.04 1.81 19.82 11.70 72.01 82.00 28.26 7.55 12.35 10.27 1.89 1.98 0.00 12.82 45.03 37.22 0.36 0.00 0.00 0.00 16.91 9.69 0.00 4 E1a_E2a KnownJunction 1 894.31 8.62 52.39 28.43 130.05 191.65 63.42 16.35 27.98 23.50 1.95 7.65 0.00 15.25 72.44 103.56 0.00 0.00 0.00 0.00 32.43 21.06 0.00 5 E1a_E4a NovelJunction 0 3.78 0.00 8.07 0.00 36.50 5.39 3.58 0.00 3.18 4.62 0.00 0.00 0.00 5.06 4.45 3.76 0.00 0.00 0.00 0.00 2.72 0.00 0.00 6 ER2a ExonRegion 0 129.03 1.91 26.79 11.19 20.96 24.56 10.38 12.35 14.48 10.80 1.20 11.42 0.00 9.35 16.11 23.21 2.81 0.00 0.00 0.00 19.43 7.82 1.72 7 E2_Da NovelBoundary 0 7.26 6.64 0.00 2.00 0.00 0.00 2.25 3.45 15.34 4.32 0.00 6.00 0.00 5.24 13.35 26.57 0.00 0.00 0.00 0.00 5.81 3.06 3.93 8 E2a_E3a KnownJunction 0 0.00 0.00 1.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 E2a_E4a NovelJunction 1 0.00 0.00 33.20 11.12 35.74 16.18 10.51 18.61 6.83 16.49 0.00 7.20 0.00 14.66 76.27 22.99 0.00 0.00 0.00 0.00 9.33 7.84 0.00 10 I2 Intron 0 40.66 0.71 1.58 6.17 13.11 6.04 8.38 2.90 8.62 4.15 0.75 7.64 0.00 9.47 2.25 7.99 0.00 0.00 0.00 0.00 2.48 2.98 0.64 11 I2_AR1 ActiveIntronRegion 0 22.17 1.02 1.84 3.18 10.02 7.08 6.13 0.11 5.34 4.39 0.69 3.77 0.00 2.86 1.86 4.48 0.00 0.00 0.00 0.00 1.59 1.79 0.49 12 I2_SR1 SilentIntronRegion 0 47.22 0.60 1.50 7.22 14.22 5.70 9.19 3.89 9.79 4.07 0.78 9.01 0.00 11.80 2.39 9.24 0.00 0.00 0.00 0.00 2.80 3.41 0.69 13 E3_Aa NovelBoundary 0 18.45 0.00 2.72 10.22 8.23 2.21 7.77 15.16 8.56 4.14 0.00 12.30 0.00 16.48 0.00 12.30 0.00 0.00 0.00 0.00 2.84 2.69 3.67 14 ER3a ExonRegion 0 48.31 1.02 1.85 10.29 18.65 7.44 9.26 5.28 10.40 3.13 0.76 12.78 1.01 8.80 8.09 7.73 0.29 0.00 0.00 0.00 3.46 4.18 1.02 15 E3_Da NovelBoundary 0 20.89 0.00 7.10 10.59 32.43 19.36 4.33 5.79 10.88 0.00 0.00 12.60 0.00 2.12 0.00 12.13 0.00 0.00 0.00 0.00 0.00 5.88 0.00 16 E3a_E4a KnownJunction 0 14.37 3.35 0.00 2.83 8.15 0.00 2.21 0.00 4.66 0.00 0.00 0.00 0.00 0.00 8.90 4.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 I3 Intron 0 45.07 0.83 3.22 8.82 10.53 5.47 7.54 5.24 3.74 0.46 0.00 11.16 0.00 2.59 6.11 2.82 0.00 0.00 0.00 0.00 2.39 1.98 0.40 18 I3_AR1 ActiveIntronRegion 0 5.68 0.00 0.00 1.36 5.39 7.38 2.67 0.00 0.00 1.15 0.00 16.41 0.00 0.00 0.00 1.99 0.00 0.00 0.00 0.00 2.96 0.00 0.00 19 I3_AR2 ActiveIntronRegion 0 62.80 1.18 4.60 12.21 13.49 5.69 10.01 7.49 5.35 0.33 0.00 11.21 0.00 3.70 8.74 3.46 0.00 0.00 0.00 0.00 2.56 2.83 0.57 20 E4_Aa NovelBoundary 0 68.83 0.00 1.42 13.95 24.70 7.89 19.21 5.05 4.92 1.37 0.00 11.70 0.00 2.12 0.00 10.94 0.00 0.00 0.00 0.00 5.75 2.94 0.00 21 ER4a ExonRegion 0 69.67 3.27 34.18 22.88 50.79 42.73 25.18 20.14 24.99 14.42 1.90 17.04 0.00 18.57 31.86 44.37 0.00 0.40 0.00 0.00 8.27 10.74 1.52 22 E4a_E5a KnownJunction 0 125.21 0.00 69.42 37.39 64.94 110.22 26.50 52.16 27.49 22.75 5.00 24.91 0.00 33.37 8.90 29.99 0.00 2.28 0.00 0.00 27.86 19.72 0.00 23 I4 Intron 0 18.43 0.45 5.19 5.10 7.11 3.99 4.40 3.99 1.90 2.21 0.00 4.16 0.00 2.99 1.20 0.99 0.12 0.00 0.00 0.00 0.98 0.69 0.00 24 I4_SR1 SilentIntronRegion 0 18.42 0.51 4.95 5.03 7.08 4.13 4.79 3.99 1.84 2.00 0.00 4.16 0.00 3.19 1.35 1.09 0.14 0.00 0.00 0.00 0.87 0.78 0.00 25 I4_AR1 ActiveIntronRegion 0 18.78 0.00 7.12 5.71 7.40 2.96 1.42 4.01 2.43 3.84 0.00 4.22 0.00 1.48 0.06 0.19 0.00 0.00 0.00 0.00 1.79 0.00 0.00 26 ER5a ExonRegion 0 198.55 1.73 40.88 22.32 39.19 37.02 15.65 47.15 35.40 22.24 5.01 21.14 1.05 27.15 26.96 32.97 2.09 0.70 0.00 0.00 18.40 24.36 9.83 27 E5a_E6a KnownJunction 0 873.64 3.09 22.21 18.21 60.53 57.58 14.40 44.65 26.27 14.59 5.11 6.30 0.00 25.25 28.31 41.70 0.00 1.66 0.00 0.00 25.76 10.84 7.85 28 ER6a ExonRegion 0 105.67 1.29 4.09 6.67 11.69 5.31 1.46 15.05 7.45 5.45 0.64 10.95 0.00 7.03 9.88 8.83 0.00 1.17 0.00 0.00 3.76 2.95 0.44