Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 UVRAG Gene 0 77.40 51.96 54.30 44.63 53.33 63.52 110.80 34.74 29.44 23.96 153.16 103.50 121.08 137.54 124.85 165.46 173.79 55.98 31.92 48.44 39.63 57.35 42.47 2 356136 Transcript 1 42.54 34.72 31.23 31.78 43.43 56.23 120.30 26.50 33.11 21.97 226.84 205.22 204.37 202.76 103.46 233.26 285.68 50.78 31.14 57.67 47.57 70.07 59.26 3 IG7_AR2 ActiveIntergenicRegion 0 0.77 21.80 0.59 2.96 2.12 8.30 5.51 0.00 0.00 0.00 0.00 0.00 1.53 0.03 0.88 0.00 2.48 0.26 0.00 7.80 1.73 0.00 0.00 4 ER1a ExonRegion 0 2.25 1.58 2.09 0.99 1.43 9.83 11.86 2.90 3.10 3.34 23.25 4.80 5.97 34.86 17.20 31.15 39.23 12.26 6.37 13.01 14.55 6.62 8.32 5 E1a_E2a KnownJunction 0 3.70 3.35 17.74 7.76 11.54 69.68 83.03 14.46 12.33 13.51 58.12 18.61 12.99 81.52 40.05 79.12 97.24 48.00 11.95 24.86 35.77 35.52 15.62 6 I1_AR3 ActiveIntronRegion 1 0.00 2.62 0.81 1.86 0.00 0.00 8.05 1.27 2.05 0.94 1.93 2.16 5.92 4.87 4.73 36.76 6.95 2.63 2.43 0.00 4.41 1.26 2.94 7 I1 Intron 0 15.89 3.95 2.69 2.59 8.25 0.61 13.22 2.07 1.23 1.15 2.07 10.18 21.56 0.97 12.39 14.54 11.72 0.62 1.71 4.14 0.74 0.56 1.57 8 I1_SR1 SilentIntronRegion 0 15.91 3.95 2.70 2.59 8.26 0.62 13.24 2.07 1.24 1.15 2.08 10.20 21.59 0.97 12.41 14.56 11.74 0.62 1.71 4.14 0.74 0.56 1.58 9 ER2a ExonRegion 1 19.69 14.58 12.09 14.30 16.44 60.87 79.18 12.74 16.38 13.55 117.38 84.28 87.68 147.34 52.03 112.13 179.40 43.94 24.92 34.60 32.66 35.19 26.95 10 E2a_E3a KnownJunction 1 30.60 18.55 16.20 15.62 31.32 41.74 44.12 16.88 17.68 18.19 160.57 176.01 199.99 225.85 63.66 165.00 168.77 32.42 0.00 45.00 32.93 44.76 16.39 11 ER3a ExonRegion 1 38.82 20.74 25.49 20.25 36.47 46.63 67.18 18.77 25.09 18.97 206.32 234.29 222.04 238.24 62.75 205.42 241.34 34.90 10.28 39.70 37.59 64.83 21.73 12 E3a_E4a KnownJunction 1 53.27 18.22 24.16 20.04 51.95 39.75 83.86 17.50 25.06 12.01 208.16 235.13 193.98 225.79 63.04 232.76 299.67 28.06 22.02 32.73 35.83 75.99 27.15 13 ER4a ExonRegion 1 30.22 15.23 25.63 25.33 26.77 45.11 65.82 16.03 32.91 21.94 230.49 166.50 199.21 226.48 77.35 214.84 309.43 40.41 21.88 58.76 47.88 70.25 46.13 14 E4a_E5a KnownJunction 1 28.00 17.50 24.98 23.67 30.90 37.25 100.51 29.08 50.38 19.64 269.44 239.18 296.57 250.69 78.25 266.34 338.85 35.61 37.08 55.16 59.00 85.79 78.70 15 ER5a ExonRegion 1 28.02 19.69 26.60 29.75 42.35 47.53 104.45 30.14 45.44 23.86 277.31 232.46 319.74 221.64 87.97 261.35 306.54 40.50 24.25 69.30 51.63 81.01 63.67 16 E5a_E6a KnownJunction 0 33.41 18.48 29.18 34.66 47.96 66.55 79.40 24.56 38.45 23.75 225.11 220.72 213.78 214.43 96.42 192.43 295.18 31.84 25.79 59.57 43.68 82.48 65.73 17 I5_SR1 SilentIntronRegion 0 19.48 6.19 5.11 5.12 8.94 1.76 13.43 4.43 2.69 2.29 1.93 6.52 16.82 1.43 9.95 14.69 8.59 2.56 1.59 4.43 0.49 0.96 1.53 18 ER6a ExonRegion 1 28.33 27.36 28.31 25.66 46.11 38.72 69.80 32.46 34.55 25.67 254.38 214.91 235.81 198.26 79.82 251.94 320.92 46.49 24.37 50.27 47.74 82.49 54.46 19 E6a_E7a KnownJunction 0 12.37 46.77 36.28 27.57 19.78 28.05 67.04 37.71 44.68 20.28 254.17 239.93 131.97 176.23 97.29 255.92 273.87 45.39 30.40 43.66 36.14 58.05 80.75 20 ER7a ExonRegion 1 46.26 27.40 24.69 28.41 45.66 63.75 87.12 27.98 30.23 25.26 234.87 193.19 220.83 189.27 79.78 228.77 307.64 33.85 26.99 52.03 46.09 55.17 70.67 21 E7a_E8a KnownJunction 0 49.93 22.89 14.87 25.60 63.92 63.60 116.06 11.58 24.94 23.67 180.36 170.46 251.61 181.06 82.08 285.65 309.96 21.47 48.57 53.12 37.50 75.93 68.55 22 ER8a ExonRegion 1 40.45 29.30 27.66 28.02 44.03 42.67 129.88 13.91 34.27 23.71 250.85 234.58 260.57 230.42 78.84 286.61 294.46 62.20 31.13 61.00 45.38 62.46 70.29 23 E8a_E9a KnownJunction 1 32.15 36.24 26.14 31.80 43.80 64.79 103.43 11.05 37.24 20.93 316.24 198.81 138.95 221.32 81.09 239.60 343.34 35.48 35.01 70.24 54.86 41.64 79.47 24 ER9a ExonRegion 1 39.62 40.84 33.34 36.72 41.05 66.62 108.46 18.32 33.20 27.01 290.57 258.80 221.76 225.05 88.40 296.30 338.87 76.89 34.78 72.24 56.39 71.06 83.57 25 E9_Da NovelBoundary 0 6.67 9.60 0.00 2.76 0.00 0.00 6.14 4.03 2.23 1.07 0.00 6.30 0.00 0.00 24.11 4.36 12.81 1.91 14.21 2.75 5.75 0.00 0.00 26 E9a_E10a KnownJunction 0 50.16 60.65 42.22 51.71 34.30 64.00 163.53 19.72 53.38 35.19 249.91 231.23 253.55 201.90 118.05 355.46 297.33 95.92 42.73 74.34 50.90 93.99 123.61 27 ER10a ExonRegion 0 56.57 46.45 36.59 44.73 49.32 52.60 169.26 19.35 40.77 34.26 281.15 195.42 248.31 222.15 123.57 304.10 323.83 58.20 25.59 83.53 46.78 84.95 72.58 28 E10a_E11a KnownJunction 0 91.35 45.91 35.36 36.89 95.67 68.88 274.21 14.38 37.41 25.49 331.08 247.73 239.27 221.14 114.47 265.06 381.49 27.48 35.77 115.56 50.97 70.11 60.27 29 ER11a ExonRegion 0 57.04 42.97 28.24 37.56 70.10 62.92 199.09 24.82 36.81 26.62 292.18 265.16 251.03 227.88 124.14 259.84 347.30 56.25 30.23 77.26 46.21 77.06 67.45 30 E11a_E12a KnownJunction 0 72.75 40.85 48.73 51.64 28.44 54.74 199.26 30.76 36.69 27.86 291.02 348.41 233.10 187.95 177.27 260.53 309.40 84.77 18.17 64.56 56.53 90.63 47.12 31 ER12a ExonRegion 0 65.36 56.57 42.94 43.83 49.02 78.17 166.34 39.99 35.45 23.83 269.45 249.78 250.72 232.46 143.56 263.89 323.37 64.55 32.10 65.93 47.71 98.65 62.75 32 E12a_E13a KnownJunction 0 33.71 60.12 29.72 42.75 55.60 80.81 197.36 42.51 38.63 26.16 215.79 240.98 296.41 228.38 148.09 247.80 363.81 41.87 37.65 78.94 48.74 96.38 80.84 33 I12_AR1 ActiveIntronRegion 0 2.03 1.27 0.23 2.77 2.46 1.32 12.12 1.71 1.38 0.43 4.20 23.20 22.09 3.60 7.83 9.57 12.04 2.19 2.21 5.20 0.70 1.02 1.39 34 I12_AR5 ActiveIntronRegion 1 26.81 15.91 8.64 15.94 12.49 5.77 29.05 4.89 5.04 4.32 2.54 20.15 36.44 1.30 7.99 22.44 17.89 3.40 1.61 5.11 0.00 1.36 5.60 35 I12_AR6 ActiveIntronRegion 1 85.19 8.64 15.93 26.35 13.60 9.17 28.69 11.96 3.71 4.59 1.93 35.36 29.31 4.87 13.06 47.06 23.11 8.31 0.00 6.91 2.39 2.08 2.94 36 I12_SR5 SilentIntronRegion 0 18.81 6.68 4.88 9.85 13.09 2.94 19.61 4.83 3.04 2.11 1.14 11.69 19.64 1.34 6.85 12.19 6.39 2.25 2.24 3.08 0.39 1.09 1.99 37 I12_AR8 ActiveIntronRegion 0 16.55 1.89 4.80 5.58 6.59 1.56 16.79 4.15 0.83 0.49 3.11 13.80 17.78 1.49 9.41 13.24 14.72 1.48 2.42 3.91 1.04 0.59 2.23 38 ER13a ExonRegion 0 53.82 61.63 32.37 43.15 72.38 90.44 176.89 48.33 35.27 21.92 236.82 289.53 287.52 244.77 146.24 230.81 302.09 58.36 41.81 58.17 49.51 81.36 72.93 39 E13a_E14a KnownJunction 1 76.01 62.49 52.01 32.26 61.80 67.29 194.05 68.76 37.18 14.94 174.57 318.55 205.67 239.86 182.34 219.69 282.37 96.46 57.79 62.00 69.31 44.88 73.75 40 I13 Intron 0 10.51 4.24 3.09 4.76 6.71 1.98 17.61 3.16 2.57 1.72 5.56 15.76 27.24 3.68 8.46 17.90 15.41 2.62 2.07 3.74 1.23 1.17 2.56 41 I13_SR1 SilentIntronRegion 0 14.50 4.98 3.98 5.81 10.38 4.01 23.42 3.79 3.54 2.54 8.36 18.69 34.12 7.73 11.57 24.31 22.22 3.00 2.24 5.22 1.64 1.86 3.70 42 I13_AR1 ActiveIntronRegion 1 20.56 10.88 4.79 15.08 17.06 1.83 33.32 6.48 5.80 2.02 7.74 23.83 27.18 3.09 27.32 43.11 23.37 7.21 7.21 4.49 0.35 2.00 4.40 43 I13_SR2 SilentIntronRegion 0 17.28 7.94 4.83 7.98 9.32 2.15 22.98 5.09 3.71 2.69 4.78 16.80 32.19 2.74 11.79 24.84 16.51 4.40 3.27 4.39 1.60 1.43 3.32 44 I13_AR2 ActiveIntronRegion 1 1.96 1.75 2.89 1.53 3.62 0.32 9.32 1.93 2.44 0.30 2.05 19.92 34.30 0.24 1.96 4.46 8.17 0.33 0.75 1.64 0.00 0.95 0.15 45 ER14a ExonRegion 0 38.21 38.44 42.94 38.98 48.54 61.19 107.76 48.68 43.39 21.06 248.84 243.06 189.08 235.13 162.47 360.27 339.78 104.02 61.87 57.72 85.20 114.44 88.64 46 E14a_E15a KnownJunction 0 23.71 48.48 50.71 48.25 30.65 45.88 121.18 34.17 28.79 18.43 296.23 125.29 163.79 230.62 189.51 243.35 408.60 54.55 68.43 51.26 73.33 94.30 51.47 47 I14 Intron 0 8.73 6.68 3.45 6.08 6.70 6.66 29.90 5.58 6.95 2.41 11.92 19.44 43.43 9.17 11.73 32.07 33.14 11.80 5.68 19.57 4.40 4.62 6.50 48 I14_AR2 ActiveIntronRegion 0 3.55 1.38 1.49 2.73 0.10 0.00 22.32 0.00 0.75 0.00 1.73 12.68 29.82 3.77 7.67 21.23 31.71 3.50 0.00 10.49 6.77 0.00 5.03 49 I14_SR2 SilentIntronRegion 0 6.85 2.95 2.38 3.94 3.77 2.93 27.80 3.48 4.01 1.65 7.98 23.26 53.35 6.68 8.44 27.50 31.50 7.98 4.16 18.61 3.62 2.88 6.11 50 I14_AR3 ActiveIntronRegion 1 20.22 3.62 4.14 8.22 10.40 4.14 45.87 5.83 5.95 0.55 13.46 42.95 104.09 10.50 19.48 42.83 47.03 8.33 5.16 23.42 3.57 2.36 12.83 51 I14_SR3 SilentIntronRegion 0 5.25 5.23 2.59 3.90 3.83 4.39 25.29 4.12 4.94 1.90 9.86 16.37 38.64 8.86 9.26 30.05 32.51 9.22 5.01 15.27 3.49 3.38 6.82 52 I14_AR4 ActiveIntronRegion 0 9.83 12.20 2.70 5.97 14.01 5.37 28.96 6.01 10.69 3.59 8.42 11.31 20.35 13.31 11.03 39.18 37.75 10.28 8.14 27.05 2.93 7.59 5.55 53 I14_SR4 SilentIntronRegion 0 8.93 10.90 4.83 9.30 9.55 11.85 37.07 9.49 9.45 3.29 14.43 26.44 49.55 12.29 16.94 38.51 36.59 12.17 7.85 24.01 4.32 7.55 6.16 54 I14_AR5 ActiveIntronRegion 1 24.58 15.30 6.27 11.19 15.25 17.66 51.46 7.87 14.05 3.50 25.93 18.07 64.16 24.46 27.15 56.89 47.04 24.26 9.06 36.52 9.49 7.28 6.55 55 I14_SR5 SilentIntronRegion 0 6.02 7.45 1.15 5.95 10.15 11.22 31.13 6.64 11.68 3.55 9.00 13.61 33.41 11.04 10.62 24.54 9.41 14.45 4.00 16.57 2.96 7.50 2.08 56 I14_AR6 ActiveIntronRegion 0 13.00 12.96 7.42 14.57 8.64 16.00 33.00 10.04 12.06 2.60 20.11 16.63 23.34 10.66 17.78 44.63 27.01 33.95 9.70 20.73 10.36 6.92 9.90 57 I14_AR7 ActiveIntronRegion 0 13.68 19.25 3.87 8.59 9.58 11.94 39.54 5.66 19.76 1.40 25.35 2.21 11.38 11.82 18.45 39.07 43.64 36.48 5.64 24.65 10.70 6.66 7.69 58 I14_SR6 SilentIntronRegion 0 20.70 14.81 7.18 13.34 18.54 15.94 39.40 11.38 16.00 6.48 26.51 12.07 29.95 10.80 18.22 34.99 34.46 19.85 8.89 25.06 6.08 10.39 7.32 59 E15_Aa NovelBoundary 1 49.49 20.65 39.29 21.58 19.19 58.83 62.09 29.08 11.69 17.35 26.85 5.70 28.57 16.48 68.11 61.52 43.20 49.00 4.80 40.20 11.98 13.41 23.65 60 ER15a ExonRegion 0 97.91 63.63 68.40 53.60 62.20 70.74 118.62 40.86 30.49 26.22 133.63 73.57 94.80 119.19 144.48 148.38 140.62 60.47 35.05 47.83 38.70 56.01 38.89