Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CASP4 Gene 0 191.83 2.57 32.14 23.55 84.96 31.43 24.87 50.23 39.30 13.91 155.54 78.14 67.35 221.90 218.09 236.47 37.30 0.00 0.07 0.31 127.92 198.51 165.13 2 416586 Transcript 0 16.43 0.03 0.99 2.26 19.75 2.70 13.66 4.33 3.78 2.67 5.96 5.50 4.41 20.65 9.96 24.52 6.02 0.00 0.00 0.00 4.95 24.40 9.67 3 417440 Transcript 0 10.98 0.00 0.64 1.78 4.85 1.60 0.03 0.80 2.09 0.00 6.22 0.00 0.00 11.74 2.84 2.01 3.20 0.00 0.00 0.00 0.00 6.41 1.47 4 444739 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 421898 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 393150 Transcript 0 12.55 0.00 1.42 1.30 0.74 0.00 0.00 1.68 1.03 0.38 1.76 1.19 5.30 3.01 9.17 6.29 0.00 0.00 0.00 0.00 0.99 1.29 0.06 7 355546 Transcript 1 329.47 0.00 74.21 53.04 1006.28 299.43 94.51 111.56 102.43 10.64 171.20 6.60 7.95 28.25 89.87 901.30 76.58 0.00 0.00 3.07 107.00 538.06 795.58 8 ER1a ExonRegion 0 19.33 0.19 2.36 1.71 15.01 7.25 6.96 2.40 2.75 1.10 4.27 0.22 0.42 12.94 14.52 8.26 1.97 0.00 0.00 0.59 6.71 12.97 8.79 9 E1a_E3a KnownJunction 1 964.32 15.85 87.08 52.71 304.41 99.09 156.29 111.52 114.09 32.21 143.77 6.15 23.38 219.91 342.79 434.42 77.33 0.00 0.00 0.00 112.87 456.99 465.40 10 ER2a ExonRegion 0 3.09 0.00 0.37 0.04 0.00 0.00 0.00 2.34 0.00 0.00 0.99 3.57 1.38 0.91 1.79 2.21 0.00 0.00 0.00 0.00 1.12 0.06 0.17 11 E2a_E3a KnownJunction 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 2.14 0.00 0.00 2.68 0.00 8.28 0.00 4.45 6.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER3a ExonRegion 1 205.73 2.55 44.67 28.16 61.38 21.74 20.70 82.30 78.23 20.59 262.63 54.62 57.16 171.06 142.77 327.94 57.31 0.00 0.00 0.00 197.09 269.84 248.42 13 E3_Ab KnownBoundary 1 198.92 0.00 63.63 35.73 93.12 35.66 8.44 101.54 90.71 22.89 507.97 122.44 100.64 575.02 378.39 251.30 144.93 0.00 0.00 0.00 331.81 451.54 204.19 14 ER3b ExonRegion 1 173.45 1.25 71.97 61.28 293.24 91.07 34.39 137.78 109.69 27.98 323.96 157.16 136.69 660.19 529.36 1059.37 77.39 0.00 0.00 0.44 197.03 778.23 794.03 15 E3_Da KnownBoundary 1 57.49 0.00 47.90 55.10 138.03 28.68 4.42 104.90 93.34 9.64 83.02 41.11 20.62 98.24 67.00 392.72 25.62 0.00 0.00 0.00 49.98 237.40 324.38 16 E3a_E3c KnownJunction 1 329.47 0.00 74.21 53.04 1006.28 299.43 94.51 111.56 102.43 10.64 171.20 6.60 7.95 28.25 89.87 901.30 76.58 0.00 0.00 3.07 107.00 538.06 795.58 17 E3_Ac KnownBoundary 0 81.64 0.00 29.86 8.26 146.10 44.52 32.81 43.54 26.56 7.84 117.98 49.52 46.91 74.93 76.89 87.16 46.19 0.00 0.00 3.20 41.08 117.02 77.85 18 ER3c ExonRegion 0 267.39 0.00 80.87 58.60 908.86 281.79 94.44 154.98 116.51 21.79 331.81 246.78 146.95 395.20 338.48 1037.27 95.73 0.00 0.00 2.13 166.75 616.72 866.31 19 ER3d ExonRegion 0 281.03 1.86 66.20 42.97 767.20 259.69 109.89 122.38 92.56 20.29 386.20 253.75 152.30 363.58 284.40 681.69 105.35 0.00 0.00 1.83 188.48 443.62 539.12 20 E3b_E4a KnownJunction 0 9.93 0.00 0.00 1.40 24.45 0.00 17.18 4.64 4.31 3.25 0.00 0.00 0.00 12.18 8.90 29.39 3.93 0.00 0.00 0.00 0.00 23.76 4.35 21 E3b_E4b KnownJunction 1 293.24 6.25 33.17 18.58 383.45 180.12 84.79 83.38 53.62 16.09 388.99 180.51 95.29 389.02 258.11 288.90 97.43 0.00 0.00 0.00 238.52 255.47 150.15 22 ER4a ExonRegion 0 22.92 0.07 1.97 3.12 15.06 5.41 10.14 4.01 3.24 2.10 11.93 11.01 8.82 29.12 11.01 19.65 8.11 0.00 0.00 0.00 9.90 25.04 14.98 23 E4_Da NovelBoundary 0 449.86 8.29 24.60 28.97 224.96 138.56 178.37 62.23 66.12 19.23 329.45 218.17 106.65 350.40 394.22 271.04 74.61 0.00 0.00 0.00 226.54 289.27 148.45 24 ER4b ExonRegion 0 300.97 6.24 31.90 22.53 262.58 146.40 128.73 75.76 61.26 19.69 370.47 190.21 89.42 384.48 310.34 269.57 83.95 0.00 0.00 0.28 238.96 274.12 142.33 25 ER4c ExonRegion 0 549.20 14.80 42.73 41.80 116.34 82.03 85.99 90.49 71.17 24.71 307.65 198.50 158.21 468.51 314.77 305.41 73.46 0.00 0.00 1.27 215.60 366.65 204.60 26 E4_Db KnownBoundary 0 3.78 0.00 1.60 1.66 7.98 5.05 0.00 2.55 1.48 0.00 4.79 0.00 0.00 14.95 4.45 4.19 0.00 0.00 0.00 0.00 0.00 11.08 0.00 27 E4b_E5a KnownJunction 0 1918.78 26.51 69.69 70.72 181.41 89.44 61.34 130.53 93.29 32.88 380.31 257.18 352.41 547.53 462.21 584.63 122.95 0.00 0.00 0.00 268.30 612.58 360.23 28 ER4d ExonRegion 0 10.98 0.00 0.64 1.78 4.85 1.60 0.03 0.80 2.09 0.00 6.22 0.00 0.00 11.74 2.84 2.01 3.20 0.00 0.00 0.00 0.00 6.41 1.47 29 ER5a ExonRegion 0 668.25 7.43 57.23 45.67 147.52 68.85 42.77 92.16 71.86 27.16 347.51 251.16 191.81 562.66 457.91 510.03 76.89 0.00 0.00 0.00 305.86 428.18 318.51 30 E5a_E6a KnownJunction 0 577.29 6.51 88.26 59.17 148.56 84.89 66.11 106.05 74.13 27.86 494.81 197.31 174.66 525.64 552.32 476.20 124.45 0.00 0.00 0.00 420.83 384.06 366.46 31 ER6a ExonRegion 0 394.49 5.92 74.16 54.08 140.20 48.61 46.46 110.52 77.41 31.87 386.25 197.59 155.57 519.54 561.07 526.52 83.98 0.00 0.69 0.00 326.57 400.78 351.47 32 E6a_E7a KnownJunction 0 322.65 3.22 66.79 54.64 105.35 48.72 50.08 118.21 61.95 33.95 311.92 154.10 102.92 461.01 579.27 528.58 67.88 0.00 0.00 0.00 234.82 383.93 286.56 33 I6_SR1 SilentIntronRegion 0 33.18 0.84 1.34 3.58 9.14 3.26 6.61 4.92 6.72 1.43 6.22 19.77 12.62 22.18 10.69 13.75 5.78 0.00 0.00 0.00 3.92 14.83 9.80 34 E7_Aa NovelBoundary 0 27.56 2.50 1.15 11.32 19.52 2.90 11.26 8.58 4.86 1.02 17.95 12.60 0.00 17.25 13.97 16.49 13.84 0.00 0.00 0.00 10.07 19.78 7.26 35 ER7a ExonRegion 0 328.94 3.54 81.90 51.68 155.99 54.80 49.87 122.22 80.57 34.81 345.55 160.79 144.58 509.33 552.21 519.83 78.05 0.00 0.00 0.00 288.01 397.65 364.47 36 E7_Da NovelBoundary 0 18.08 0.00 3.67 6.23 7.89 0.00 4.46 11.42 8.16 1.67 4.74 5.85 0.00 24.19 9.64 35.38 17.11 0.00 0.00 0.00 14.15 25.53 16.39 37 E7a_E8a KnownJunction 0 179.59 3.35 64.04 75.61 105.01 26.29 27.69 102.19 101.13 35.03 343.03 191.76 143.33 396.96 498.43 502.60 55.82 0.00 0.00 0.00 289.67 336.11 364.50 38 ER8a ExonRegion 0 210.50 4.38 87.03 57.63 104.40 23.81 23.52 102.06 86.67 35.51 302.71 107.06 104.08 415.35 537.13 437.42 82.55 0.00 0.00 0.00 278.83 333.91 282.29 39 E8_Da NovelBoundary 0 6.00 0.00 0.00 5.49 3.23 2.67 16.08 0.00 9.06 1.32 4.42 0.00 6.82 21.48 10.26 16.58 4.77 0.00 0.00 0.00 6.30 12.19 8.02 40 E8a_E9a KnownJunction 1 295.24 0.00 68.42 46.01 80.65 28.62 42.53 99.97 83.51 26.94 307.34 63.62 103.08 416.33 423.76 342.90 55.82 0.00 0.00 0.00 227.65 214.93 204.19 41 E9_Aa NovelBoundary 0 39.34 0.00 6.56 5.83 39.56 7.10 6.93 11.09 4.48 4.89 4.58 12.15 19.97 7.30 18.54 3.59 8.04 0.00 0.00 0.00 10.75 16.96 16.90 42 ER9a ExonRegion 0 346.07 3.23 60.31 42.62 98.87 17.84 30.83 76.40 73.43 23.89 185.97 51.12 92.72 290.75 348.26 261.92 59.13 0.00 0.00 0.00 189.86 382.05 206.69 43 E9_Da NovelBoundary 0 171.66 0.00 35.51 23.27 35.31 8.69 16.65 32.61 37.82 20.84 16.53 11.85 13.47 58.51 26.58 63.57 8.98 0.00 0.00 0.00 5.50 88.97 27.66 44 E9a_E10a KnownJunction 1 722.05 5.72 46.27 33.86 157.47 32.14 49.59 43.13 41.81 6.96 133.98 45.31 122.88 146.63 574.82 234.81 69.75 0.00 0.00 0.00 235.12 229.20 222.37 45 I9 Intron 0 69.94 0.85 6.01 9.44 28.50 7.18 11.27 15.33 12.68 5.53 12.81 14.44 11.61 31.20 24.83 36.46 4.31 0.00 0.00 0.00 8.28 52.10 16.86 46 I9_SR1 SilentIntronRegion 0 42.64 0.98 6.42 5.52 12.41 7.33 9.10 11.53 10.30 4.65 15.14 12.66 11.03 24.75 20.73 38.01 7.92 0.00 0.00 0.00 2.82 54.96 21.12 47 I9_AR1 ActiveIntronRegion 0 80.58 1.18 6.97 13.24 39.90 9.14 13.09 20.31 15.27 6.04 11.06 14.30 11.73 39.81 28.97 43.94 3.46 0.00 0.00 0.00 12.16 56.45 16.39 48 I9_SR2 SilentIntronRegion 0 89.18 0.00 3.52 7.61 29.38 3.10 10.86 11.01 11.08 5.86 13.04 17.44 12.35 23.64 22.73 19.48 0.77 0.00 0.00 0.00 8.55 39.64 11.73 49 ER10a ExonRegion 1 224.81 1.59 14.44 15.83 75.19 15.91 13.17 32.65 19.88 4.79 50.68 58.04 98.26 120.84 180.94 86.07 15.69 0.00 0.00 0.00 66.00 81.48 58.24 50 ER10b ExonRegion 0 34.57 0.00 2.04 3.86 2.23 0.00 0.00 0.58 3.09 1.15 1.61 0.00 6.25 8.12 21.28 9.91 0.00 0.00 0.00 0.00 1.84 3.82 0.00