Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MAP6 Gene 0 46.70 262.25 194.63 103.23 111.49 460.03 348.44 243.56 186.41 100.21 0.07 0.10 0.14 0.10 0.12 0.00 0.18 346.03 309.72 286.96 6.09 26.65 19.57 2 434603 Transcript 0 53.05 379.39 208.56 134.37 150.27 581.83 492.62 315.16 182.04 125.88 0.13 0.19 0.20 0.00 0.19 0.00 0.23 351.97 278.42 370.73 3.02 20.50 16.33 3 304771 Transcript 0 53.69 148.29 183.98 67.56 81.28 362.80 210.47 133.45 209.34 63.27 0.00 0.00 0.00 0.22 0.04 0.00 0.13 339.90 399.72 166.30 15.85 47.68 34.51 4 ER1a ExonRegion 0 1.29 12.73 10.33 1.92 2.50 40.35 21.39 16.24 19.04 12.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 74.79 43.28 42.88 1.71 2.52 2.26 5 E1a_E2a KnownJunction 0 14.82 125.77 129.33 42.79 29.88 235.04 126.13 150.74 220.66 132.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 608.41 420.91 372.77 17.42 24.00 29.11 6 ER2a ExonRegion 0 18.16 186.87 170.01 62.23 60.82 510.57 283.67 208.63 254.81 122.80 0.00 0.00 0.92 0.00 0.00 0.00 0.00 636.20 489.06 443.71 13.80 39.43 32.91 7 E2_Da NovelBoundary 0 3.78 53.54 14.58 23.71 11.71 72.00 54.14 78.99 83.62 42.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 240.72 128.85 160.69 5.81 3.12 8.45 8 E2a_E3a KnownJunction 0 3.26 113.86 160.73 73.32 76.23 476.60 227.70 188.82 205.24 119.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 562.61 470.60 348.09 7.23 34.05 43.71 9 I2 Intron 0 9.64 79.94 32.73 29.36 21.15 129.19 92.34 64.02 68.56 37.86 0.17 0.18 0.23 0.00 0.00 0.00 0.00 178.28 106.96 156.15 2.33 8.63 6.21 10 I2_SR1 SilentIntronRegion 0 8.11 93.95 27.24 22.22 22.61 132.40 82.16 63.36 78.42 33.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 179.70 118.18 145.07 3.41 9.80 4.33 11 I2_AR2 ActiveIntronRegion 0 10.47 103.07 33.66 36.33 25.90 149.70 98.14 72.55 78.65 44.63 0.00 0.55 0.35 0.00 0.00 0.00 0.00 157.93 132.75 163.61 2.18 9.71 7.06 12 I2_SR2 SilentIntronRegion 0 7.29 47.40 23.70 21.05 19.12 114.15 79.56 55.58 56.13 29.20 0.00 0.00 0.34 0.00 0.00 0.00 0.00 175.73 85.33 136.12 2.87 5.63 6.04 13 I2_AR4 ActiveIntronRegion 0 13.30 94.71 51.65 38.00 17.58 127.33 115.94 69.18 72.04 46.15 0.83 0.00 0.00 0.00 0.00 0.00 0.00 226.36 102.81 192.70 1.26 11.61 6.71 14 E3_Aa NovelBoundary 0 10.74 66.37 44.11 56.94 51.27 196.25 137.57 95.83 89.41 50.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 269.90 85.56 155.83 0.00 6.18 12.21 15 ER3a ExonRegion 0 23.41 187.29 169.89 75.13 83.84 451.59 280.22 276.03 270.86 151.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 529.25 586.03 429.26 11.97 52.89 34.46 16 E3_Da KnownBoundary 0 46.82 360.66 134.80 109.48 147.20 744.91 519.97 402.11 260.12 183.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 970.26 459.21 340.68 8.22 33.43 37.30 17 E3a_E4a KnownJunction 0 32.23 91.43 56.56 15.48 44.99 234.75 135.98 14.99 118.55 30.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 217.34 286.03 102.27 17.36 42.13 33.21 18 ER3b ExonRegion 0 53.05 379.39 208.56 134.37 150.27 581.83 492.62 315.16 182.04 125.88 0.13 0.19 0.20 0.00 0.19 0.00 0.23 351.97 278.42 370.73 3.02 20.50 16.33 19 E3_Db NovelBoundary 0 6.74 35.06 26.40 21.91 33.45 150.37 167.73 105.89 62.62 34.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 108.57 31.91 101.31 0.00 0.00 0.00 20 I3 Intron 0 5.16 31.22 15.82 9.75 12.81 56.58 49.84 26.44 27.28 10.96 0.03 0.08 0.00 0.05 0.03 0.02 0.00 65.27 42.00 59.26 0.65 2.02 1.76 21 I3_SR1 SilentIntronRegion 0 3.17 13.23 19.48 7.53 17.41 58.33 42.20 55.80 37.00 21.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 68.12 34.82 75.01 0.43 1.08 1.34 22 I3_AR1 ActiveIntronRegion 0 6.64 22.58 11.73 5.98 16.98 63.94 56.39 45.68 32.25 12.88 0.00 0.00 0.00 0.00 0.00 0.00 0.00 66.23 57.13 77.21 0.37 1.74 2.30 23 I3_SR2 SilentIntronRegion 0 4.80 19.97 10.93 6.77 8.34 47.63 43.21 28.02 32.84 10.99 0.11 0.00 0.00 0.00 0.00 0.00 0.00 77.29 50.27 63.85 0.64 2.22 1.89 24 I3_SR3 SilentIntronRegion 0 5.28 13.87 7.29 9.24 3.16 29.99 29.67 9.55 22.59 8.40 0.00 0.00 0.00 0.00 1.06 0.21 0.00 73.41 35.13 48.87 2.57 3.43 3.53 25 I3_AR4 ActiveIntronRegion 0 3.83 20.74 13.44 8.92 8.98 44.75 39.00 9.64 16.16 9.71 0.00 0.00 0.00 0.94 0.00 0.00 0.00 72.70 48.95 50.55 1.99 2.69 2.65 26 I3_AR5 ActiveIntronRegion 0 3.92 48.86 20.82 13.59 12.33 58.31 52.99 22.78 26.75 13.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 90.84 39.96 53.48 0.00 1.10 0.78 27 I3_AR6 ActiveIntronRegion 0 6.20 85.67 31.08 21.20 18.56 79.90 77.49 24.47 34.22 14.00 0.12 0.00 0.00 0.00 0.00 0.00 0.00 77.20 34.95 67.35 0.81 2.72 0.90 28 I3_SR6 SilentIntronRegion 0 7.27 88.76 45.83 18.87 26.00 79.54 66.51 19.99 28.99 15.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 129.99 45.87 78.80 1.09 4.58 2.07 29 I3_AR8 ActiveIntronRegion 0 9.70 60.91 49.44 27.03 17.31 99.97 60.81 31.00 34.39 12.33 0.00 0.00 0.00 0.10 0.00 0.00 0.00 100.96 40.55 58.19 0.00 0.89 1.33 30 E4_Aa NovelBoundary 0 14.00 65.45 66.76 15.05 15.87 126.35 113.01 39.06 28.67 7.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 124.48 91.20 58.10 0.00 0.00 4.01 31 ER4a ExonRegion 0 75.15 205.15 311.41 119.65 117.57 490.85 284.97 251.92 300.13 95.71 0.00 0.00 0.00 0.43 0.08 0.00 0.27 462.46 513.41 230.33 14.34 53.22 35.82 32 IG2_SR1 SilentIntergenicRegion 0 0.70 0.48 1.92 0.48 0.63 0.00 0.33 1.71 0.00 1.78 0.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.35 0.00 4.58 5.09 14.04