Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C11orf82 Gene 0 20.58 74.57 25.89 21.38 23.59 19.81 100.67 20.52 7.19 37.43 82.59 158.25 57.59 82.74 63.28 127.59 69.05 41.69 13.61 47.12 2.44 11.99 3.07 2 329143 Transcript 0 4.68 32.60 4.93 7.72 5.21 5.73 53.70 9.03 4.19 17.09 41.02 100.49 35.81 56.25 23.29 71.66 31.98 23.00 6.46 34.62 1.81 6.70 1.54 3 430323 Transcript 0 3.26 9.08 1.60 3.40 4.33 0.00 12.81 2.26 0.00 4.84 15.11 18.91 0.00 14.72 19.04 7.01 22.91 15.25 0.00 9.46 0.00 0.00 0.00 4 IG1_SR4 SilentIntergenicRegion 0 0.63 1.18 0.49 0.88 0.94 0.27 6.56 0.56 0.30 0.67 1.54 15.54 8.25 3.21 1.51 6.81 4.83 1.44 0.39 5.53 0.12 0.11 0.12 5 IG1_SR5 SilentIntergenicRegion 0 1.40 5.11 1.33 2.28 1.94 1.21 11.46 3.23 1.09 0.79 1.66 13.19 7.91 3.00 8.32 17.87 5.02 3.23 0.42 5.62 0.00 0.00 0.19 6 IG1_SR6 SilentIntergenicRegion 0 1.02 3.93 0.88 0.48 0.00 0.89 6.72 0.00 0.00 0.41 0.00 12.13 5.60 2.33 2.39 16.52 1.60 2.89 0.77 2.57 0.00 0.50 0.00 7 IG1_SR7 SilentIntergenicRegion 0 1.38 2.98 0.30 2.65 1.74 3.88 9.28 0.84 2.40 0.28 2.20 18.09 10.34 4.69 4.73 31.48 4.30 1.50 1.56 4.16 0.00 1.36 0.00 8 ER1a ExonRegion 0 0.00 0.59 0.00 0.00 2.56 0.00 3.25 1.73 1.90 0.05 0.56 4.15 2.54 0.00 0.00 10.53 7.15 0.00 2.52 0.00 0.00 0.00 0.00 9 ER1b ExonRegion 0 0.78 25.53 6.50 4.48 3.56 11.83 36.82 9.29 1.20 15.12 46.25 73.97 28.55 51.04 27.30 88.35 46.31 33.62 2.09 28.41 2.57 8.18 1.08 10 E1a_E2a KnownJunction 0 0.00 31.57 8.01 4.96 3.40 26.01 91.59 13.97 1.48 12.71 56.91 73.97 40.74 35.67 19.41 23.67 50.30 22.30 3.67 19.30 2.53 8.63 0.00 11 I1 Intron 0 0.85 1.72 0.58 0.74 1.48 0.58 4.39 1.07 0.53 2.09 1.34 13.18 6.89 2.91 3.60 25.59 4.29 1.66 1.04 2.44 0.08 0.47 0.07 12 I1_SR2 SilentIntronRegion 0 1.07 2.12 0.62 0.88 2.07 0.69 4.16 1.25 0.63 2.76 1.49 13.19 6.33 2.80 4.20 26.38 3.92 1.70 1.14 2.18 0.04 0.60 0.11 13 E2_Aa NovelBoundary 1 3.48 9.54 0.00 0.00 0.00 0.00 18.90 0.00 0.00 3.04 0.00 26.11 20.94 2.24 0.00 74.68 9.16 2.57 0.00 11.19 0.00 0.00 0.00 14 ER2a ExonRegion 0 7.03 38.84 9.46 14.73 16.95 16.09 72.75 16.37 2.39 24.55 61.98 147.15 52.00 71.21 28.24 64.73 63.67 28.98 4.07 44.59 2.43 11.12 1.85 15 E2a_E3a KnownJunction 0 10.67 46.70 1.12 12.32 3.65 8.23 60.19 10.72 2.66 25.14 46.27 100.53 40.26 61.04 29.17 58.45 20.85 23.30 8.00 40.78 2.84 8.08 0.00 16 E2a_E4a KnownJunction 0 3.26 9.08 1.60 3.40 4.33 0.00 12.81 2.26 0.00 4.84 15.11 18.91 0.00 14.72 19.04 7.01 22.91 15.25 0.00 9.46 0.00 0.00 0.00 17 ER3a ExonRegion 0 4.29 33.30 4.24 8.48 10.29 11.80 76.16 14.65 5.30 22.55 67.60 140.49 51.75 59.32 23.55 98.63 51.30 30.99 7.23 52.83 2.05 11.60 1.79 18 E3a_E4a KnownJunction 0 3.78 49.79 14.34 10.09 4.33 2.90 75.21 9.04 6.89 20.60 49.64 156.80 48.70 104.66 40.42 119.03 48.62 37.72 8.09 44.87 2.35 7.10 4.35 19 E4_Aa NovelBoundary 1 0.00 0.00 0.00 1.73 0.00 5.22 8.04 0.00 0.00 1.50 0.00 18.91 6.82 9.89 0.00 108.01 0.00 8.71 0.00 3.26 0.00 0.00 0.00 20 ER4a ExonRegion 0 23.10 81.16 28.81 23.25 25.62 20.88 107.04 21.68 7.86 40.11 86.74 164.86 59.97 86.51 69.06 135.06 71.65 43.55 15.03 48.30 2.47 12.34 3.31 21 IG2 Intergenic 0 0.30 0.29 0.00 0.29 0.38 0.20 1.71 0.28 0.13 0.43 0.21 6.10 3.72 1.22 2.47 22.56 2.14 1.36 0.46 0.69 0.00 0.00 0.00 22 IG2_SR1 SilentIntergenicRegion 0 0.31 0.00 0.00 0.00 0.63 0.00 0.00 0.00 0.00 0.00 0.00 10.70 2.85 0.38 0.00 16.06 0.00 0.85 0.00 0.00 0.00 0.00 0.00 23 IG2_AR1 ActiveIntergenicRegion 0 2.12 0.00 0.00 0.00 5.35 0.00 0.00 0.00 0.00 0.00 0.00 6.49 18.76 1.62 0.00 41.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 IG2_SR2 SilentIntergenicRegion 0 0.35 0.38 0.00 0.28 0.41 0.25 2.14 0.36 0.09 0.55 0.18 6.32 4.06 1.46 3.07 25.60 2.44 1.44 0.44 0.88 0.00 0.00 0.00