Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 FAT3 Gene 0 1.13 27.59 2.09 14.00 17.02 10.98 15.11 19.23 17.70 15.84 0.45 0.79 0.95 0.54 0.90 1.00 0.78 15.71 7.57 28.70 1.57 33.90 18.39 2 409404 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 298047 Transcript 0 0.00 23.73 1.02 2.12 3.57 6.21 4.05 3.84 0.00 1.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.61 0.00 4.86 0.00 4 359050 Transcript 0 1.67 3.19 0.57 1.78 4.22 1.19 5.47 2.06 1.21 3.66 0.69 1.10 7.58 1.88 1.05 1.41 0.71 0.58 0.98 3.17 1.18 5.57 2.38 5 489716 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 469900 Transcript 0 0.00 1.61 0.00 0.70 0.04 0.69 2.91 0.06 1.71 0.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.16 1.66 2.61 0.00 0.80 4.49 7 ER1a ExonRegion 0 0.00 6.13 0.72 3.96 3.91 3.15 12.60 8.03 6.32 6.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.38 5.73 28.73 1.01 22.01 11.85 8 E1_Ab KnownBoundary 0 0.00 9.93 0.00 6.46 7.39 7.78 14.09 6.24 4.66 3.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.68 0.00 29.21 5.56 9.67 14.51 9 ER1b ExonRegion 0 0.00 5.45 1.89 6.42 2.74 3.10 6.47 5.91 6.43 6.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.34 5.91 29.62 1.19 18.19 14.44 10 E1a_E2a KnownJunction 0 0.00 12.63 1.83 3.63 0.00 2.67 9.98 4.81 7.18 5.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.03 3.29 21.60 0.00 14.39 16.39 11 I1_AR5 ActiveIntronRegion 0 0.30 25.93 3.50 16.15 12.73 0.54 9.11 8.87 2.40 2.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.02 0.94 4.81 0.00 2.54 2.56 12 ER2a ExonRegion 0 0.18 8.33 1.07 4.96 4.98 2.67 8.94 4.88 3.97 7.12 0.12 0.15 0.19 0.10 0.02 0.25 0.12 16.78 5.90 26.57 0.37 16.29 15.52 13 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 3.31 0.00 1.77 0.00 0.00 3.33 0.00 0.00 12.99 2.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.82 0.00 14 E2a_E4a KnownJunction 0 0.00 21.90 0.00 3.60 7.22 0.00 4.24 12.65 5.27 10.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.90 0.00 26.08 0.00 19.59 19.38 15 E3_Aa NovelBoundary 0 439.19 402.17 490.34 535.93 382.09 193.47 581.00 496.22 440.82 477.44 86.71 36.91 104.54 34.73 49.08 189.86 230.29 363.96 184.19 301.24 160.44 108.63 194.20 16 ER3a ExonRegion 0 3.35 6.37 1.15 3.55 5.14 2.39 9.18 4.13 2.42 3.99 1.37 2.20 2.17 1.41 2.10 2.82 1.41 1.16 1.95 6.34 2.36 5.31 4.77 17 ER4a ExonRegion 0 0.00 15.88 0.00 2.59 5.27 0.00 4.83 8.89 5.54 6.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.08 4.01 22.89 0.00 25.91 22.92 18 E4a_E5a KnownJunction 0 0.00 8.95 0.00 1.50 3.90 0.00 3.62 6.53 6.42 5.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.03 4.80 31.96 0.00 29.76 11.52 19 ER5a ExonRegion 0 0.00 10.95 0.46 5.86 2.91 0.89 7.57 5.51 7.77 5.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.42 2.82 28.60 0.59 22.99 14.28 20 E5a_E6a KnownJunction 0 0.00 6.12 1.83 0.00 0.00 0.00 2.03 1.97 6.60 5.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.52 0.00 43.08 3.03 49.29 20.40 21 ER6a ExonRegion 0 0.00 10.87 0.64 4.42 4.53 1.77 9.14 3.87 2.63 1.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.17 0.00 22.41 1.78 21.49 14.35 22 E6a_E7a KnownJunction 0 0.00 2.63 0.00 0.00 0.00 0.00 2.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.34 0.00 10.80 6.30 16.78 8.02 23 ER7a ExonRegion 0 0.00 3.14 0.00 0.74 1.03 1.81 6.51 3.89 2.26 1.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.13 2.57 19.26 2.42 24.03 11.52 24 E7a_E8a KnownJunction 0 0.00 5.72 0.00 0.00 0.00 2.90 9.01 11.58 6.66 2.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.74 12.52 30.94 0.00 8.02 7.26 25 ER8a ExonRegion 0 0.00 2.36 0.00 1.48 2.94 6.23 6.96 7.64 5.21 4.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20.02 6.73 28.75 0.53 26.52 8.80 26 E8a_E9a KnownJunction 0 0.00 5.26 0.00 3.36 0.00 0.00 4.15 11.62 8.94 8.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.71 4.61 32.85 2.84 14.08 11.61 27 ER9a ExonRegion 0 0.00 5.01 0.00 1.92 0.65 2.18 5.11 8.63 6.23 5.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28.60 6.99 25.98 3.62 30.34 16.17 28 E9a_E10a KnownJunction 0 0.00 3.35 0.00 1.43 0.00 0.00 2.12 6.16 9.06 2.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26.74 21.93 44.10 0.00 50.33 11.44 29 ER10a ExonRegion 0 0.05 6.50 0.41 2.57 2.04 5.33 7.62 5.58 11.01 6.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18.04 7.55 30.75 1.63 28.54 19.74 30 E10a_E11a KnownJunction 0 0.00 6.71 1.33 1.93 0.00 15.50 2.25 6.33 11.52 3.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21.97 3.76 42.89 2.90 13.59 15.88 31 ER11a ExonRegion 0 0.55 6.67 0.56 2.41 4.31 5.60 7.86 10.63 14.16 8.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23.02 2.47 38.36 3.11 22.58 23.79 32 E11a_E12a KnownJunction 0 0.00 3.29 0.00 2.06 12.14 11.53 6.76 12.86 20.17 5.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20.77 4.80 31.96 2.97 31.90 28.34 33 ER12a ExonRegion 0 0.00 6.13 0.00 5.42 6.90 12.05 5.87 15.74 15.41 6.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18.57 4.22 32.23 0.97 38.67 30.78 34 E12a_E13a KnownJunction 0 0.00 0.00 0.00 3.66 0.00 13.97 1.99 21.48 7.96 5.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26.24 0.00 23.65 0.00 28.04 38.75 35 ER13a ExonRegion 0 0.46 5.05 0.40 6.62 3.50 4.65 6.41 10.70 12.00 7.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23.28 6.14 25.61 0.96 34.65 21.31 36 E13a_E14a KnownJunction 0 0.00 2.83 0.00 6.19 0.00 5.28 1.81 11.42 8.91 4.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44.65 17.88 43.27 0.00 38.21 44.22 37 ER14a ExonRegion 0 0.00 6.59 1.16 5.98 4.43 4.13 8.28 10.38 12.03 8.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39.09 8.28 29.02 1.32 28.91 26.09 38 E14a_E15a KnownJunction 0 0.00 6.25 1.24 5.59 10.19 2.73 5.65 16.18 13.51 6.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20.93 4.14 23.07 9.27 34.60 36.79 39 ER15a ExonRegion 0 0.00 10.99 0.06 4.30 5.00 4.77 6.73 6.63 11.47 9.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25.54 4.52 18.65 1.78 28.99 28.62 40 E15a_E16a KnownJunction 0 0.00 23.94 0.00 7.92 12.05 11.41 8.66 3.57 9.46 12.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20.10 4.33 23.52 0.00 43.41 15.62 41 ER16a ExonRegion 0 0.00 19.45 0.00 4.01 10.35 7.24 9.82 4.27 11.35 14.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22.20 3.88 24.73 0.13 38.20 29.17 42 E16a_E17a KnownJunction 0 0.00 25.32 0.00 4.89 0.00 4.88 8.17 7.48 8.97 16.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.21 0.00 24.03 2.41 43.29 32.18 43 ER17a ExonRegion 0 1.50 20.11 0.27 7.39 5.07 7.50 10.42 9.10 13.28 13.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25.45 8.10 24.29 2.40 35.36 16.17 44 E17a_E18a KnownJunction 0 0.00 39.66 1.83 5.93 10.70 2.16 9.45 11.46 17.36 24.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22.76 13.55 24.74 5.87 39.99 19.55 45 ER18a ExonRegion 0 0.00 18.51 0.60 7.69 3.20 8.07 9.38 14.81 12.17 13.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.85 12.36 22.66 2.16 26.63 19.59 46 E18a_E19a KnownJunction 0 0.00 35.85 1.60 5.63 0.00 5.62 16.25 13.39 6.39 20.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22.59 20.24 28.19 0.00 38.21 12.12 47 ER19a ExonRegion 0 0.14 11.60 0.21 5.61 4.27 5.30 7.90 10.83 16.34 13.87 0.37 0.00 0.00 0.17 0.37 0.00 0.00 30.24 10.25 30.85 1.99 21.73 20.31 48 E19a_E20a KnownJunction 0 0.00 9.14 1.83 7.19 0.00 4.43 6.36 8.87 15.08 8.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35.19 9.04 36.69 2.53 16.90 21.85 49 ER20a ExonRegion 0 0.00 7.19 1.72 4.81 5.71 5.57 3.42 13.43 17.29 11.08 0.73 0.00 0.00 0.00 0.00 0.00 0.00 18.34 5.17 23.37 1.50 23.63 16.31 50 E20a_E21a KnownJunction 0 0.00 17.10 0.00 3.93 7.39 6.42 7.51 14.25 17.62 9.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.49 9.60 22.95 0.00 30.98 11.27 51 ER21a ExonRegion 0 0.68 10.55 1.77 5.50 6.71 6.92 9.80 18.15 21.53 14.71 0.62 0.00 0.00 0.00 0.00 0.00 0.00 25.69 10.24 29.44 1.42 36.67 18.72 52 E21a_E22a KnownJunction 0 0.00 23.88 0.00 5.09 16.30 6.47 7.95 10.47 11.26 19.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23.96 3.48 23.46 0.00 34.29 15.79 53 ER22a ExonRegion 0 0.00 8.03 0.16 2.89 2.79 3.57 3.48 5.73 13.07 9.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.34 2.12 21.31 1.20 20.22 17.09 54 E22a_E23a KnownJunction 0 0.00 6.58 1.33 3.60 0.00 0.00 1.77 4.68 11.26 5.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22.76 0.00 17.77 0.00 19.29 12.21 55 ER23a ExonRegion 0 0.00 7.37 1.32 6.75 7.63 7.20 8.34 14.29 11.64 8.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23.23 6.70 25.89 0.73 28.60 25.67 56 E23a_E24a KnownJunction 0 0.00 3.35 0.00 4.46 3.40 11.24 4.06 8.17 11.52 13.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.84 11.58 25.18 0.00 11.51 26.89 57 ER24a ExonRegion 0 0.00 5.46 0.33 3.51 2.77 6.87 4.24 10.34 17.05 11.56 0.00 0.65 0.00 0.00 0.00 0.00 0.00 20.91 2.74 24.84 1.08 19.79 13.41 58 E24_Ab KnownBoundary 0 0.00 3.22 0.00 2.06 4.24 0.00 4.50 1.64 10.59 7.98 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.23 3.76 11.12 3.15 17.57 4.35 59 ER24b ExonRegion 0 0.00 6.17 0.00 3.94 3.44 4.97 3.04 3.62 9.37 11.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.17 2.41 17.99 0.70 15.38 18.59 60 E24a_E25b KnownJunction 0 0.00 17.37 0.00 7.99 4.07 0.00 7.91 13.80 13.69 11.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30.26 8.09 17.96 0.00 23.82 38.93 61 ER25a ExonRegion 0 0.00 1.61 0.00 0.70 0.04 0.69 2.91 0.06 1.71 0.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.16 1.66 2.61 0.00 0.80 4.49 62 E25_Ab KnownBoundary 0 0.00 0.00 0.00 1.50 0.00 0.00 8.30 0.00 1.45 1.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.20 4.61 0.00 0.00 2.69 4.10 63 ER25b ExonRegion 0 0.00 7.40 0.00 7.82 7.48 18.45 6.76 14.26 27.81 17.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28.29 3.44 28.81 2.15 30.29 19.59 64 E25a_E26a KnownJunction 0 0.00 2.76 0.00 8.66 3.48 19.99 3.89 21.07 23.96 17.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.20 0.00 35.35 6.18 31.72 15.45 65 E25a_E28a KnownJunction 0 0.00 3.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 66 I25_AR2 ActiveIntronRegion 0 0.00 3.15 0.00 1.14 2.09 1.51 2.99 2.45 1.36 1.14 0.00 1.00 0.00 0.00 0.00 0.00 0.00 1.02 0.57 3.40 0.00 9.12 3.00 67 ER26a ExonRegion 0 0.00 11.46 0.00 13.67 7.45 10.67 6.58 24.05 30.63 25.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27.47 5.15 24.72 1.58 27.57 29.90 68 E26a_E27a KnownJunction 0 0.00 20.85 0.00 21.34 12.73 8.01 16.21 16.10 28.04 28.98 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30.14 0.00 25.89 0.00 38.70 60.69 69 ER27a ExonRegion 0 0.00 14.80 0.00 14.80 7.88 13.30 19.05 17.86 25.46 30.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26.48 6.64 23.46 1.53 26.51 54.25 70 E27a_E28a KnownJunction 0 0.00 18.29 0.00 1.96 12.73 27.03 23.19 14.70 11.23 23.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.88 12.71 20.26 3.15 25.35 23.99 71 ER28a ExonRegion 0 0.00 9.64 0.68 7.96 4.29 8.78 6.31 12.81 25.89 30.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26.13 4.15 24.73 2.90 38.19 16.71 72 E28_Da KnownBoundary 0 0.00 19.47 0.00 8.76 8.15 9.54 8.44 13.68 25.69 23.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34.07 26.17 13.87 0.00 61.60 60.86 73 ER28b ExonRegion 0 0.00 11.95 0.39 6.88 4.82 9.60 11.17 12.37 21.16 20.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29.84 5.61 24.68 1.90 41.44 34.73 74 E28_Db KnownBoundary 0 0.00 18.02 0.00 8.09 8.06 19.65 16.52 13.43 15.31 13.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.21 4.80 26.40 0.00 13.53 60.69 75 ER28c ExonRegion 0 3.30 80.70 6.11 40.47 52.50 27.58 32.51 49.80 37.73 36.71 1.29 2.38 3.02 1.66 2.83 3.09 2.56 13.28 12.01 34.70 1.83 59.76 22.66 76 ER28d ExonRegion 0 0.00 23.73 1.02 2.12 3.57 6.21 4.05 3.84 0.00 1.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.61 0.00 4.86 0.00