Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RPS3 Gene 0 3888.26 10119.44 15291.63 11763.85 2252.57 5406.44 3332.26 2512.01 1104.60 2495.07 13762.68 2304.77 1789.49 6812.72 10747.37 9209.08 8019.70 6582.96 9878.28 3646.50 7921.37 5377.87 5901.94 2 278572 Transcript 0 0.00 10.17 9.19 6.13 0.00 7.34 6.62 0.00 0.00 3.44 14.50 0.00 0.00 25.17 18.86 4.46 8.25 2.77 4.78 11.70 14.32 0.00 5.87 3 405680 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 422465 Transcript 0 429.97 445.62 268.09 237.21 184.89 258.11 159.76 28.46 15.21 20.49 241.87 112.64 81.22 367.73 479.82 220.73 217.42 81.52 263.11 46.88 186.18 43.44 156.77 5 ER1a ExonRegion 0 0.00 10.17 9.19 6.13 0.00 7.34 6.62 0.00 0.00 3.44 14.50 0.00 0.00 25.17 18.86 4.46 8.25 2.77 4.78 11.70 14.32 0.00 5.87 6 ER1b ExonRegion 1 10656.81 29755.54 13433.55 11783.57 6659.70 16211.26 10777.82 2833.44 1239.67 2684.39 24535.65 301.05 437.14 13115.55 17260.10 19899.26 18456.33 8842.31 20065.87 6610.80 15439.57 6704.08 14782.20 7 E1a_E2a KnownJunction 1 21921.37 59977.48 31115.67 28246.89 12918.94 28025.74 20282.08 6696.14 2920.60 6249.54 44877.00 1002.33 1015.68 14944.15 17020.87 33796.00 31801.18 19494.41 36907.32 11294.23 22746.61 13895.17 24072.91 8 E1a_E4a NovelJunction 0 176.40 256.47 154.55 189.35 26.99 135.55 107.14 21.56 18.89 14.69 75.91 12.15 19.97 21.90 49.69 89.72 41.23 82.74 109.56 18.98 38.55 24.68 44.90 9 ER2a ExonRegion 1 2924.49 7164.00 13157.33 9837.46 1658.92 3702.06 2350.97 2686.73 1262.17 2885.41 18641.76 2590.74 1883.75 3292.91 4025.65 5328.00 12432.79 5161.39 6814.05 3171.22 11044.96 2785.25 3792.60 10 E2a_E4a KnownJunction 1 2773.23 3330.66 24930.40 18846.65 703.99 1692.09 1142.67 5052.31 2183.92 5159.27 42333.25 3246.91 980.29 12108.36 12684.13 8271.08 30165.46 5298.74 16729.05 9989.74 20576.99 4894.45 7427.19 11 ER3a ExonRegion 0 10.16 6.64 22.14 19.90 0.54 1.83 1.77 3.34 1.40 3.13 15.98 2.31 0.63 20.03 41.39 40.22 5.72 14.29 35.68 6.52 7.64 23.34 21.34 12 E4_Ab NovelBoundary 1 3467.06 3083.73 26440.55 23234.47 752.12 1946.27 1510.14 4723.47 1926.02 4323.43 13048.99 2560.13 800.76 22235.44 30256.71 18639.98 9543.23 11789.51 26311.25 7648.07 7396.05 13623.41 14055.72 13 ER4a ExonRegion 1 2463.54 2887.21 24518.54 19354.23 585.68 1737.17 1240.30 4772.20 2054.28 4729.04 28667.19 2883.09 813.18 17721.20 20316.25 13918.12 20218.88 9266.25 21613.06 8629.76 14312.67 9839.50 10713.32 14 ER4b ExonRegion 1 3933.20 4646.76 21152.50 18264.26 1536.11 2356.03 1182.18 3694.24 1564.15 3314.33 11266.33 2830.58 1451.84 11080.48 17244.19 25352.24 6208.55 13775.14 20557.59 5287.00 6429.58 9177.01 16928.02 15 E4a_E5a KnownJunction 0 3233.83 6275.40 16555.83 13207.51 4835.15 5021.03 1846.75 2448.88 1144.03 2439.15 11427.63 3306.63 1956.04 5576.93 8315.12 7039.61 5585.50 9510.07 6624.38 3407.23 6598.75 4195.66 4865.53 16 ER5a ExonRegion 0 2622.14 14165.91 15664.10 11615.34 5574.43 16000.78 9688.57 2589.82 1177.91 2622.28 13875.51 2948.82 1377.34 6492.17 9857.54 6281.70 6603.63 6587.44 6826.03 3613.09 8130.46 5150.66 3653.52 17 E5a_E6a KnownJunction 0 2856.80 42458.29 19663.17 13948.08 2571.65 14322.66 10703.67 3133.54 1312.11 3097.24 16687.02 3137.67 1492.76 7594.13 13242.01 7188.46 7878.06 5981.89 8311.30 4367.08 8751.20 5980.55 4297.01 18 ER6a ExonRegion 0 5624.26 16210.26 22820.02 17563.02 2096.62 4775.88 2846.60 3344.79 1434.81 3287.37 16664.89 3353.15 3057.28 9019.17 15714.30 11538.24 7914.46 9509.01 11952.18 4866.08 8617.44 7499.39 6502.96 19 E6a_E7a KnownJunction 0 3042.69 4445.06 26891.63 19599.34 1308.57 2492.54 1401.02 3520.74 1463.82 3413.48 14578.48 2194.92 2088.99 5968.07 13185.65 8810.59 7734.26 8250.55 10898.01 4192.07 7493.22 5924.89 5437.54 20 ER7a ExonRegion 0 2722.14 4909.76 12867.42 9007.24 1063.65 2263.52 1416.26 1830.25 783.01 1832.11 8922.14 1785.90 1802.30 4738.28 9406.91 5455.41 5007.60 4086.86 7177.99 2243.48 5739.62 5174.85 3224.93 21 E7b_E8a KnownJunction 0 516.68 2729.32 4647.71 4003.89 462.14 952.92 578.18 739.78 336.25 703.89 2559.81 1723.31 1308.03 2133.39 3576.50 1258.39 1414.49 1000.64 1505.36 833.61 1631.23 1200.05 802.75 22 ER7b ExonRegion 0 603.91 2351.50 3730.44 2952.92 444.17 926.07 522.08 441.91 226.44 555.48 2447.05 1431.61 1156.87 1876.94 3371.26 1035.29 1296.15 747.72 1415.36 563.83 1678.49 1145.94 602.99 23 ER8a ExonRegion 0 2103.15 3315.65 2858.02 2437.88 966.02 1794.46 969.68 339.42 179.58 368.60 2738.12 1157.81 1081.60 2459.98 3170.16 1465.67 1619.52 721.79 1860.65 544.21 1495.65 787.28 880.91 24 ER8b ExonRegion 0 849.78 884.61 514.04 454.52 369.25 514.38 317.75 53.58 29.03 37.85 467.76 222.97 161.81 715.42 918.25 401.24 429.12 148.74 490.55 87.23 364.71 63.55 292.20 25 IG49 Intergenic 0 33.03 27.08 27.58 44.17 11.51 25.26 34.49 9.33 7.50 9.62 12.05 9.82 6.49 6.84 8.46 9.51 7.17 35.00 19.62 30.68 10.83 11.13 13.61 26 IG49_AR1 ActiveIntergenicRegion 0 46.88 56.27 53.07 67.85 26.12 60.48 82.58 21.28 14.11 25.76 60.12 55.34 31.48 29.81 40.00 29.48 27.61 55.96 58.25 68.45 26.46 41.12 34.82 27 IG49_SR1 SilentIntergenicRegion 0 1.89 1.82 0.00 0.00 0.00 6.56 17.79 0.00 0.00 0.00 1.73 3.87 3.46 5.64 1.83 2.66 0.00 1.65 2.85 3.81 3.94 1.86 7.88 28 IG49_AR3 ActiveIntergenicRegion 0 38.45 21.45 35.56 48.88 16.28 31.63 50.98 10.90 5.64 12.76 3.42 6.66 9.47 3.77 7.05 5.05 5.81 17.64 17.59 34.56 6.03 5.94 9.52 29 IG49_AR4 ActiveIntergenicRegion 0 9.95 40.06 47.42 93.90 5.35 16.32 33.76 23.51 9.63 15.48 3.87 11.69 23.45 2.60 2.32 2.97 3.30 7.39 19.75 40.43 7.49 4.17 12.63 30 IG49_AR5 ActiveIntergenicRegion 0 14.82 41.14 53.63 101.69 5.35 16.65 40.33 20.48 8.08 12.79 4.01 12.32 18.04 3.25 2.23 2.97 0.51 5.40 12.50 34.86 2.71 2.72 12.88 31 IG49_AR6 ActiveIntergenicRegion 0 16.93 36.42 57.48 102.09 7.05 19.50 38.27 18.86 6.18 8.45 5.45 13.78 9.81 3.25 2.90 0.81 0.00 3.70 6.37 35.59 2.20 3.60 14.68 32 IG49_AR7 ActiveIntergenicRegion 0 29.03 37.48 57.13 100.07 13.51 23.49 61.28 14.49 4.76 9.50 5.43 17.73 1.34 1.39 3.04 2.69 0.94 6.95 4.55 34.55 0.42 4.17 14.12 33 IG49_SR3 SilentIntergenicRegion 0 27.39 17.83 19.42 36.51 9.62 14.59 27.03 8.10 6.72 6.29 5.68 4.02 2.75 3.08 4.19 7.05 4.76 33.61 15.34 21.86 8.70 6.98 14.58 34 IG49_AR8 ActiveIntergenicRegion 0 28.68 22.03 35.05 47.90 6.69 21.28 26.59 11.50 10.80 10.74 5.37 3.88 2.84 5.89 4.03 13.66 6.37 47.77 17.55 31.20 14.55 12.03 13.66 35 IG49_SR4 SilentIntergenicRegion 0 26.44 19.23 18.37 35.99 14.45 25.26 38.26 4.74 4.99 4.55 4.52 3.34 4.49 3.73 3.96 5.85 3.76 25.24 14.52 24.37 5.24 5.90 6.76 36 IG49_AR9 ActiveIntergenicRegion 0 25.38 35.77 26.23 46.53 8.43 22.12 25.00 7.22 6.69 8.66 5.07 3.40 2.06 2.76 3.08 4.51 4.48 37.18 12.08 24.05 8.89 5.59 9.38 37 IG49_SR5 SilentIntergenicRegion 0 44.32 25.46 29.95 46.57 6.49 21.64 19.27 8.32 7.36 8.85 5.08 0.84 1.09 3.95 3.73 7.35 3.49 35.42 13.02 31.20 10.25 7.11 8.38