Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 INTS4 Gene 0 79.05 108.68 84.08 147.51 45.03 91.96 86.23 45.54 35.34 51.83 108.35 77.27 69.02 135.06 112.97 104.05 152.73 90.40 61.26 65.21 67.96 64.45 56.93 2 354849 Transcript 0 50.20 114.45 50.96 92.52 40.92 85.69 87.20 35.38 29.64 47.13 132.49 113.99 86.39 165.14 95.67 132.73 170.72 104.14 59.99 93.53 63.16 69.32 67.30 3 433818 Transcript 0 12.43 8.04 7.34 22.87 5.11 14.65 7.36 7.78 5.22 4.66 10.84 4.15 5.14 8.41 8.17 6.68 10.18 9.86 3.02 7.19 6.33 3.94 6.38 4 IG28_SR1 SilentIntergenicRegion 0 0.62 1.29 1.42 0.00 1.21 0.00 0.51 0.00 0.85 0.00 9.85 0.00 3.94 6.45 6.13 8.92 17.13 1.05 0.00 1.34 1.56 4.62 6.46 5 ER1a ExonRegion 1 55.65 114.80 14.53 33.21 31.95 116.40 95.63 20.80 13.71 23.90 88.11 8.29 16.76 105.71 75.64 132.84 133.12 96.58 51.94 87.96 50.95 47.46 93.40 6 E1a_E2a KnownJunction 0 33.71 73.80 34.24 52.27 62.65 41.11 57.28 30.56 24.45 44.16 52.80 54.92 13.64 94.47 41.78 153.38 97.34 123.08 31.81 40.65 37.87 51.62 75.12 7 ER2a ExonRegion 0 18.27 42.24 37.23 57.08 13.27 23.51 36.68 22.73 22.98 34.57 126.97 60.84 40.79 127.56 73.44 111.41 167.59 96.48 45.14 90.70 46.67 51.64 63.31 8 E2a_E3a KnownJunction 0 12.89 89.00 59.81 65.33 36.93 34.58 56.31 19.63 26.79 31.00 134.46 106.08 147.07 135.38 70.34 130.99 162.97 120.92 58.73 110.77 24.83 82.48 59.75 9 ER3a ExonRegion 0 35.75 113.50 49.09 109.03 57.53 146.56 150.88 35.27 34.24 42.76 162.48 118.40 97.70 195.35 99.38 128.61 189.61 82.99 50.51 116.23 53.41 71.93 57.31 10 E3a_E4a KnownJunction 0 41.86 205.88 46.45 110.61 38.12 116.30 115.04 30.07 40.51 59.04 170.25 210.22 98.86 211.67 99.76 121.85 182.23 112.30 85.08 117.48 77.84 83.52 52.24 11 ER4a ExonRegion 0 47.95 124.35 40.96 107.41 37.59 83.38 88.14 30.79 39.58 48.82 159.47 177.83 125.40 214.55 98.48 147.94 211.91 106.01 87.64 107.87 87.45 88.13 58.38 12 E4_Da NovelBoundary 0 34.82 26.84 12.98 14.92 12.82 11.13 7.95 3.90 1.71 4.54 7.53 0.00 0.00 4.41 15.20 7.69 9.54 6.67 3.67 8.82 0.00 5.94 7.17 13 E4a_E7a KnownJunction 0 56.01 128.07 45.74 124.79 24.02 31.18 62.23 45.51 40.07 54.91 126.82 156.50 141.55 203.60 129.67 182.86 199.91 99.65 80.00 89.74 105.45 77.34 59.24 14 ER5a ExonRegion 0 0.00 0.00 0.00 0.17 0.00 0.00 0.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 ER6a ExonRegion 0 0.00 0.00 0.00 2.73 0.00 0.00 2.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.62 0.00 0.00 0.00 0.00 0.00 16 ER7a ExonRegion 0 37.76 116.60 52.57 114.94 46.47 80.94 93.53 36.75 44.45 58.91 143.00 166.20 118.54 237.82 108.17 126.62 194.06 106.18 83.93 91.19 103.63 99.43 77.87 17 E7a_E8a KnownJunction 0 74.68 116.43 67.27 104.38 59.59 125.44 152.85 27.11 44.88 63.02 146.93 165.20 108.43 214.67 103.22 178.16 166.06 128.59 62.68 80.92 112.99 128.96 84.00 18 ER8a ExonRegion 0 66.94 125.88 55.41 119.13 73.56 157.81 149.40 35.08 52.21 59.19 164.90 214.52 159.19 257.63 148.19 181.12 245.69 88.80 109.68 81.98 117.53 106.91 78.08 19 E8a_E9a KnownJunction 1 37.56 160.50 48.85 115.24 82.34 122.43 160.22 36.23 49.77 54.07 126.45 223.87 179.86 211.08 164.29 155.26 206.73 62.93 76.90 77.98 90.50 76.36 81.61 20 ER9a ExonRegion 0 45.83 133.37 56.11 108.30 65.72 93.63 120.82 32.90 52.97 74.74 144.79 167.39 104.45 212.49 106.30 162.23 188.37 120.66 65.82 84.39 99.88 85.99 80.35 21 E9a_E10a KnownJunction 0 39.78 148.66 75.60 142.27 61.46 100.00 135.49 19.76 58.13 82.84 141.98 137.14 134.24 253.75 106.68 189.27 239.83 140.49 91.48 103.74 122.88 98.16 118.23 22 ER10a ExonRegion 0 37.17 118.84 61.69 107.19 53.27 94.72 91.87 24.91 42.59 74.71 136.10 144.91 134.73 199.11 110.99 164.28 207.41 116.36 60.92 91.51 95.21 68.48 82.30 23 E10a_E11a KnownJunction 0 11.04 79.06 48.70 78.94 14.94 47.53 59.49 17.33 21.85 42.25 67.23 37.51 79.70 93.71 55.88 90.49 123.14 92.32 39.15 69.09 50.84 57.38 30.30 24 ER11a ExonRegion 0 15.61 69.00 54.70 63.62 23.45 87.69 69.51 23.24 26.01 52.17 70.71 38.12 28.08 95.67 39.81 87.76 174.44 90.90 34.33 61.76 89.95 32.50 34.71 25 E11a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 ER12a ExonRegion 0 30.50 74.63 52.94 68.17 22.66 70.99 78.58 26.24 20.11 54.51 87.17 37.11 71.53 124.47 73.69 95.74 147.22 107.18 46.60 63.27 70.25 51.40 45.38 27 E12a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 ER13a ExonRegion 0 22.73 48.93 24.74 58.34 17.28 59.38 54.30 21.46 16.57 32.51 47.67 28.31 16.46 82.19 42.98 66.64 137.69 71.45 38.36 26.96 40.44 39.45 30.98 29 E13a_E14a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 ER14a ExonRegion 0 20.68 32.03 19.84 31.05 6.42 39.13 29.41 12.33 6.05 19.76 13.02 16.92 10.40 46.03 27.49 38.28 58.12 28.36 17.06 9.48 9.17 16.54 14.42 31 E14a_E15a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 I14_AR1 ActiveIntronRegion 0 9.14 5.07 10.51 32.64 7.42 19.80 19.94 9.41 8.21 4.51 15.31 15.94 16.68 13.89 14.00 10.36 24.59 5.15 10.05 13.43 2.18 17.89 19.49 33 ER15a ExonRegion 0 64.35 42.90 49.68 66.96 10.26 63.12 39.40 22.35 15.79 29.30 41.67 26.13 5.30 53.50 38.09 32.41 77.66 39.84 16.34 27.75 32.28 24.84 25.80 34 E15a_E16a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35 ER16a ExonRegion 0 88.15 114.79 109.59 177.24 70.31 124.77 132.26 61.10 41.31 73.21 111.17 96.51 45.36 164.39 125.08 117.80 162.09 94.30 59.62 62.77 79.63 67.59 60.97 36 E16a_E17a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37 ER17a ExonRegion 0 88.17 98.74 121.92 170.81 34.62 119.79 95.15 69.58 38.05 79.01 136.55 101.17 68.18 193.97 139.41 130.64 190.07 111.15 81.65 67.37 96.96 89.01 70.33 38 E17a_E18a KnownJunction 0 6.45 9.14 8.87 24.71 0.00 12.89 0.00 4.35 3.12 4.57 1.95 5.70 0.00 8.89 0.00 3.25 7.57 10.20 0.00 5.94 2.78 8.39 11.61 39 E17a_E19a NovelJunction 0 39.56 18.35 15.73 48.58 7.98 12.78 28.09 7.11 8.68 4.94 31.22 5.85 15.10 14.24 16.32 0.00 19.26 34.90 9.41 6.33 14.64 17.33 15.88 40 E17a_E20a KnownJunction 0 149.73 138.40 130.63 172.94 66.21 178.19 122.60 83.01 24.42 85.02 171.04 132.79 95.77 197.95 172.57 84.68 191.77 99.28 49.04 80.34 83.96 69.74 86.99 41 ER18a ExonRegion 0 17.15 9.99 7.84 14.05 11.88 19.09 13.26 3.88 2.01 3.29 8.03 9.97 15.33 11.22 18.04 10.94 21.09 6.61 6.94 12.71 8.65 4.11 12.69 42 E18a_E19a KnownJunction 0 0.00 3.16 0.00 6.46 4.33 24.42 0.00 2.55 0.00 0.00 7.42 0.00 0.00 2.30 4.45 0.00 4.77 1.82 0.00 6.52 0.00 0.00 0.00 43 E19_Aa NovelBoundary 0 25.19 7.89 1.83 13.32 4.07 4.88 38.77 2.09 4.37 6.82 2.26 6.15 14.45 5.00 4.45 8.29 4.21 11.11 0.00 9.52 3.15 2.88 0.00 44 ER19a ExonRegion 0 35.51 18.67 12.37 45.77 12.06 27.09 17.73 15.59 12.74 6.34 24.59 7.19 7.36 15.50 15.27 22.01 20.26 20.49 9.38 10.72 12.58 9.17 8.75 45 E19a_E20a KnownJunction 0 27.93 15.33 22.26 66.19 7.47 19.08 17.75 28.09 18.63 18.45 33.90 6.15 13.31 20.95 19.41 10.60 17.58 29.27 4.80 14.45 20.32 5.94 11.61 46 ER20a ExonRegion 0 159.37 180.17 118.77 240.01 92.31 148.36 174.82 88.22 48.10 83.30 187.45 122.10 141.60 225.22 202.66 154.17 257.93 105.89 91.97 75.10 117.34 120.38 94.69 47 E20a_E21a KnownJunction 0 152.77 304.02 138.88 268.96 100.93 176.94 270.67 105.93 50.78 80.53 179.94 221.47 183.92 331.98 272.45 188.24 258.06 110.06 107.01 66.47 99.83 113.47 90.91 48 I20_AR1 ActiveIntronRegion 0 4.35 17.51 10.28 40.62 10.28 30.61 16.31 4.09 5.49 9.28 1.66 3.64 3.84 0.61 1.03 4.53 6.34 8.08 9.07 11.13 3.65 3.73 4.08 49 E21_Aa NovelBoundary 0 21.41 14.73 15.82 45.82 4.07 26.01 13.29 19.43 3.30 4.92 2.32 12.30 0.00 4.89 0.00 8.12 9.07 17.78 19.20 15.47 8.71 14.63 13.06 50 ER21a ExonRegion 0 156.94 244.46 141.28 250.28 113.83 241.31 196.13 97.35 52.50 83.14 207.06 137.05 92.35 219.14 209.61 137.56 271.57 130.19 100.63 77.02 108.47 94.07 90.24 51 E21_Da NovelBoundary 0 10.30 70.71 21.23 43.78 4.16 21.29 6.45 2.05 0.00 10.10 2.53 6.00 13.64 4.94 4.45 17.43 9.26 0.00 7.15 6.26 17.48 0.00 3.93 52 E21a_E22a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 53 E22_Aa NovelBoundary 0 7.56 8.68 4.67 23.54 12.14 47.53 15.02 2.01 6.45 9.91 0.00 0.00 0.00 0.00 4.45 4.19 3.93 3.44 4.80 9.40 2.47 5.02 0.00 54 ER22a ExonRegion 0 197.71 209.38 161.43 364.24 106.42 179.01 156.01 98.68 75.32 81.49 206.07 129.32 166.51 208.05 212.50 164.31 246.84 156.69 119.90 110.02 103.91 114.56 93.48 55 E22_Da NovelBoundary 0 3.11 12.04 4.46 35.09 4.24 14.14 23.76 6.70 7.44 7.95 2.63 25.81 12.99 0.00 0.00 3.50 4.30 24.13 0.00 29.47 14.21 4.90 3.16 56 E22a_E23a KnownJunction 0 342.28 209.57 206.85 346.61 166.04 154.97 162.74 83.87 66.84 69.04 222.48 118.54 157.94 200.95 252.55 165.85 293.22 142.31 66.26 106.36 128.44 90.56 104.57 57 I22_AR3 ActiveIntronRegion 0 5.13 8.20 15.19 29.66 6.80 12.32 12.01 9.51 4.38 7.84 2.86 1.81 5.27 1.20 3.69 6.70 7.59 3.87 1.08 8.27 1.78 5.30 0.00 58 E23_Aa NovelBoundary 0 6.15 42.30 6.30 13.62 0.00 2.90 39.35 8.95 2.89 4.30 0.00 0.00 0.00 0.00 4.45 4.36 12.25 0.00 0.00 3.26 5.93 0.00 0.00 59 ER23a ExonRegion 0 251.79 262.81 179.70 350.24 126.07 155.63 159.93 121.54 63.16 83.38 217.68 155.64 198.70 178.76 196.41 166.64 263.14 155.49 138.09 93.55 99.42 147.83 96.96 60 E23a_E24a KnownJunction 0 250.19 290.34 225.92 474.93 129.63 181.66 196.48 175.26 81.28 128.96 218.27 145.55 158.76 232.15 230.05 177.90 261.24 153.42 146.55 87.76 96.81 159.33 88.78 61 E24_Aa NovelBoundary 0 20.23 13.75 16.94 21.74 22.16 12.55 16.65 23.49 3.85 14.21 0.00 6.15 0.00 4.36 10.75 7.95 8.42 14.38 17.22 14.96 19.71 2.94 7.60 62 ER24a ExonRegion 0 171.91 207.08 207.20 382.24 69.87 198.20 155.72 127.58 74.41 90.33 156.89 123.96 142.66 166.73 177.47 166.83 220.62 197.14 128.11 97.99 114.50 123.10 93.26 63 E24a_E25a KnownJunction 0 246.34 238.05 263.36 422.89 105.69 173.59 112.44 137.56 89.99 90.39 215.05 197.16 243.98 189.18 329.81 157.65 250.40 175.47 134.40 118.06 109.59 114.08 123.35 64 ER25a ExonRegion 0 148.77 191.16 169.45 218.85 61.73 129.47 106.81 74.36 66.64 65.33 150.04 90.83 87.19 151.35 178.14 95.40 183.50 126.98 78.99 77.54 99.95 70.48 64.89 65 E25_Da NovelBoundary 1 16.67 35.98 17.24 28.20 32.17 29.13 46.15 10.88 19.99 29.90 2.63 12.60 12.34 23.66 32.14 44.26 0.00 40.17 24.94 29.79 19.46 11.39 4.01 66 E25a_E26a KnownJunction 1 458.30 289.82 176.16 234.80 113.75 182.51 157.35 75.45 79.19 67.64 222.85 61.07 74.67 159.04 204.71 217.98 259.28 213.65 160.48 94.21 90.81 89.09 136.84 67 I25 Intron 0 8.79 14.41 12.76 19.76 18.55 15.13 21.41 12.52 9.38 17.18 3.38 16.11 20.77 9.93 4.60 14.59 12.01 11.11 14.13 16.18 9.16 3.35 7.49 68 I25_SR1 SilentIntronRegion 0 8.80 14.42 12.77 19.78 18.57 15.15 21.43 12.53 9.39 17.20 3.38 16.13 20.79 9.94 4.61 14.60 12.02 11.12 14.15 16.19 9.16 3.35 7.50 69 ER26a ExonRegion 0 230.26 217.39 175.74 248.95 58.18 118.53 103.90 67.34 58.58 66.96 151.98 67.05 81.71 190.37 250.28 141.09 181.74 146.09 103.30 76.98 96.36 69.17 98.58 70 E26a_E27a KnownJunction 1 250.27 182.20 168.09 307.09 64.60 95.74 87.53 61.28 43.58 75.05 97.39 24.76 0.00 141.74 216.82 129.97 181.49 72.67 77.93 65.32 57.58 74.70 98.51 71 I26 Intron 0 17.97 11.07 11.74 21.20 6.95 7.72 20.58 6.04 4.05 4.62 10.18 8.97 8.03 9.50 10.76 8.78 9.58 14.30 6.62 13.15 7.18 8.77 4.68 72 I26_SR1 SilentIntronRegion 0 17.99 11.10 11.84 21.36 6.98 7.82 20.61 6.11 4.09 4.66 10.25 9.05 8.06 9.60 10.84 8.90 9.59 14.43 6.70 13.22 7.25 8.81 4.74 73 I26_AR1 ActiveIntronRegion 0 21.93 12.29 7.13 13.44 5.35 0.00 26.42 1.49 2.19 2.29 6.77 4.53 8.95 2.73 6.33 0.00 11.10 6.30 0.72 10.93 2.60 7.10 0.40 74 E27_Aa NovelBoundary 0 68.01 11.97 25.37 15.55 23.17 15.67 29.28 8.17 14.41 2.61 14.74 6.30 0.00 7.95 20.40 11.11 13.74 32.13 3.86 8.63 14.76 10.96 7.60 75 ER27a ExonRegion 0 108.72 124.09 147.91 256.37 57.44 66.83 67.98 53.71 38.00 61.39 92.69 36.57 40.20 99.83 181.72 97.38 116.65 63.80 61.61 62.67 57.49 69.80 48.87