Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RAB30 Gene 0 31.96 40.03 11.57 22.38 31.97 75.18 42.98 15.67 31.60 23.36 56.65 380.33 169.94 203.47 289.25 250.43 183.27 84.86 24.25 67.71 33.34 20.31 18.06 2 457539 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 260056 Transcript 0 27.14 27.67 7.94 17.73 1.34 43.75 25.78 11.11 35.81 25.67 85.13 411.92 163.07 224.34 311.29 359.30 212.07 115.98 52.93 88.60 36.95 25.67 25.70 4 ER1a ExonRegion 0 20.64 23.85 2.51 2.77 23.34 49.84 34.57 5.19 7.45 5.58 18.25 7.43 13.05 37.14 32.37 115.21 44.28 26.48 14.96 29.42 11.28 8.39 7.84 5 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 4.46 0.00 0.00 1.56 7.63 0.00 0.00 0.00 0.00 27.60 13.46 0.00 0.00 3.07 2.78 0.00 3.50 6 E1a_E3a NovelJunction 1 3.63 15.72 8.22 6.46 15.87 20.50 4.02 4.07 13.05 7.12 27.11 51.92 27.27 55.39 59.71 40.50 38.15 17.29 7.81 40.91 28.60 4.96 0.00 7 I1 Intron 0 24.27 9.83 4.39 6.42 7.10 3.53 15.51 3.46 3.29 2.01 0.53 11.67 14.81 1.01 12.46 15.38 10.64 2.75 2.31 7.98 0.78 0.23 1.67 8 I1_AR1 ActiveIntronRegion 0 2.12 0.00 1.23 0.00 0.00 0.00 3.97 1.73 2.47 2.29 1.93 0.00 0.00 0.00 8.70 26.75 4.95 3.70 15.93 14.18 0.00 0.00 2.94 9 I1_SR3 SilentIntronRegion 0 50.42 18.52 7.97 10.04 12.52 4.91 19.21 6.21 4.93 2.95 0.63 15.04 16.65 1.08 18.19 19.12 14.24 3.48 2.88 9.11 0.71 0.24 2.18 10 I1_AR4 ActiveIntronRegion 0 10.91 7.28 2.66 6.66 7.63 6.34 17.74 2.19 4.02 1.66 0.35 18.18 13.50 1.64 7.83 12.79 11.21 2.95 3.67 7.61 0.67 0.25 2.49 11 I1 Intron 0 12.80 9.20 5.02 5.08 5.41 4.07 10.77 4.82 3.69 3.17 0.58 9.58 11.06 1.07 13.89 16.64 8.80 4.53 2.32 6.84 1.28 0.28 1.99 12 I1_SR1 SilentIntronRegion 0 14.83 10.69 4.42 5.20 5.89 3.61 10.87 5.19 3.90 3.38 0.44 9.37 11.91 1.06 14.35 16.57 9.50 3.46 2.64 6.98 0.95 0.14 1.76 13 E2_Aa NovelBoundary 0 3.63 20.79 7.92 2.90 3.57 2.78 14.84 5.91 1.30 1.34 0.00 0.00 0.00 2.47 11.13 27.86 12.44 10.90 0.00 12.34 3.15 5.63 0.00 14 ER2a ExonRegion 0 11.69 8.32 7.93 5.17 6.23 12.42 14.25 3.90 3.73 2.91 7.79 10.55 12.58 17.35 15.45 50.64 19.12 5.10 3.22 1.98 1.99 4.21 11.11 15 E2_Da NovelBoundary 0 16.89 9.54 6.24 3.40 3.82 8.69 12.14 0.00 4.69 0.00 0.00 0.00 6.01 0.00 14.71 7.69 13.84 12.35 0.00 9.46 3.03 0.00 0.00 16 E2a_E3a KnownJunction 0 0.00 0.00 1.83 0.00 7.89 4.71 0.00 0.00 1.10 2.39 4.16 53.42 12.34 7.18 13.35 32.98 8.98 1.53 0.00 0.00 0.00 17.51 7.77 17 I2_AR1 ActiveIntronRegion 0 13.23 8.18 6.85 9.51 1.78 1.04 10.92 2.30 4.04 2.44 1.59 0.60 5.16 1.87 12.76 24.53 7.18 5.65 0.45 5.43 2.50 0.00 2.71 18 ER3a ExonRegion 0 8.19 12.46 7.45 18.18 26.39 42.58 21.24 10.06 20.47 11.74 43.14 198.30 91.01 174.91 171.49 223.79 151.15 69.72 24.54 48.79 32.60 18.63 16.14 19 E3a_E4a KnownJunction 0 28.60 24.27 6.65 16.88 12.22 35.83 11.88 11.13 29.80 15.20 42.01 231.08 171.09 174.82 291.61 281.29 216.36 91.78 32.00 73.44 36.70 13.96 37.56 20 ER4a ExonRegion 0 18.12 26.56 14.44 25.21 33.67 103.06 43.31 19.55 32.77 23.91 52.07 287.19 169.12 185.19 267.26 234.51 189.53 73.87 23.78 71.63 40.58 16.05 16.29 21 E4a_E5a KnownJunction 0 12.52 45.65 18.75 38.66 41.68 158.77 87.57 26.04 51.91 18.51 78.07 344.36 153.07 165.99 358.98 202.00 246.66 70.68 42.17 95.36 46.27 17.27 32.86 22 I4_AR2 ActiveIntronRegion 0 10.58 3.60 0.80 2.88 2.68 0.00 7.23 2.38 2.49 3.97 2.07 24.09 9.79 3.58 20.73 11.63 16.41 3.78 1.99 1.79 2.04 0.91 0.00 23 ER5a ExonRegion 0 35.25 40.36 14.45 25.51 22.00 81.26 41.77 23.01 37.15 25.79 72.03 397.66 195.94 234.88 314.42 293.84 229.91 93.37 32.31 91.54 48.76 14.70 26.94 24 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 E5b_E6a KnownJunction 0 26.23 27.89 7.60 16.71 0.00 45.31 29.72 8.83 35.79 26.97 75.55 430.94 167.85 223.73 317.94 371.61 207.11 113.25 50.92 80.92 40.83 28.41 27.91 26 ER5b ExonRegion 0 28.04 27.45 8.27 18.74 2.68 42.18 21.85 13.40 35.82 24.37 94.71 392.90 158.29 224.94 304.63 347.00 217.03 118.72 54.95 96.28 33.06 22.92 23.49 27 E6_Aa NovelBoundary 0 9.19 6.71 0.00 11.89 4.33 0.00 8.57 2.05 14.53 0.00 0.00 67.97 13.80 24.25 37.09 28.62 16.92 20.89 0.00 11.44 0.00 0.00 0.00 28 ER6a ExonRegion 0 38.86 49.81 13.02 26.84 38.34 85.57 49.77 17.42 38.24 28.92 66.45 499.91 214.01 247.14 366.73 287.77 215.85 102.96 26.27 77.55 36.62 25.38 19.05 29 IG3 Intergenic 0 32.58 71.25 19.11 32.53 35.63 91.99 42.10 16.77 23.53 23.57 12.46 131.79 77.73 38.43 72.42 50.06 35.43 15.33 8.91 37.47 4.58 8.54 4.72 30 IG3_AR8 ActiveIntergenicRegion 0 43.69 63.95 12.82 36.59 37.89 99.06 59.71 18.47 32.25 27.37 30.23 318.47 173.79 86.08 161.62 100.39 84.13 28.10 12.37 67.22 10.17 15.78 10.05 31 IG3_SR6 SilentIntergenicRegion 0 5.16 8.52 1.99 7.16 10.37 14.44 8.69 2.48 1.70 3.37 4.71 6.76 7.04 19.18 3.81 14.49 11.35 16.05 12.54 16.76 5.51 6.77 4.59 32 IG3_AR7 ActiveIntergenicRegion 0 19.51 141.33 16.31 32.62 46.06 133.74 55.27 16.42 31.56 29.12 11.72 61.08 49.28 48.07 28.62 62.74 40.02 36.24 14.70 56.87 8.90 6.86 8.15 33 IG3_SR5 SilentIntergenicRegion 0 17.57 104.56 10.13 20.10 26.16 89.75 34.45 14.52 18.05 18.50 7.46 44.51 33.21 20.97 35.03 30.95 18.63 10.62 18.66 31.24 2.15 6.48 3.59 34 IG3_AR5 ActiveIntergenicRegion 0 52.13 157.60 40.76 54.23 77.97 173.23 80.12 29.23 42.87 43.65 6.87 89.35 61.98 25.36 53.87 30.83 20.80 11.46 16.41 48.44 1.72 12.06 2.82 35 IG3_SR4 SilentIntergenicRegion 0 68.59 238.95 114.13 125.76 96.69 178.21 80.88 46.51 49.97 71.53 7.20 87.18 54.57 22.44 52.22 40.12 18.61 14.87 33.45 48.45 2.20 13.92 5.87 36 IG3_AR4 ActiveIntergenicRegion 0 97.62 292.52 86.84 120.94 123.87 308.66 108.72 52.61 60.45 70.96 6.31 131.84 117.57 32.90 106.24 45.73 20.64 17.28 19.12 59.30 2.89 15.38 3.91 37 IG3_AR3 ActiveIntergenicRegion 0 100.29 94.21 77.48 92.46 79.71 229.56 65.71 56.98 44.71 64.59 7.77 70.35 58.50 27.01 98.11 33.00 15.14 11.95 9.99 39.42 2.30 12.91 3.28 38 IG3_SR2 SilentIntergenicRegion 0 2.45 1.59 0.08 0.64 0.35 0.69 0.11 0.00 0.01 0.15 0.00 30.00 2.56 0.69 2.11 10.61 0.51 0.26 0.00 0.94 0.00 0.00 0.25