Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CHORDC1 Gene 0 82.26 111.80 103.18 150.38 65.36 103.40 54.18 56.74 46.71 69.50 197.50 348.14 97.65 198.38 146.42 116.69 126.51 37.20 37.92 76.89 26.36 82.96 41.56 2 320585 Transcript 1 15.02 19.45 72.57 87.08 21.08 54.87 21.46 29.23 35.74 94.19 363.09 146.11 76.84 490.69 241.80 413.56 292.88 168.41 89.42 152.14 81.97 110.79 168.45 3 457199 Transcript 0 0.00 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 ER1a ExonRegion 0 24.73 22.52 9.90 11.30 15.55 51.62 19.14 5.39 8.21 12.64 115.41 6.61 4.56 87.00 41.83 80.78 100.54 43.26 19.13 31.86 43.33 17.95 31.24 5 E1a_E2a KnownJunction 1 41.12 18.48 36.52 40.02 12.22 8.46 17.80 17.79 27.29 45.58 816.21 60.32 26.95 248.40 109.52 109.12 665.26 53.47 52.05 123.87 226.72 20.45 38.50 6 ER2a ExonRegion 1 8.80 20.74 51.22 58.90 1.28 16.36 14.56 20.43 35.00 70.42 696.89 116.72 48.59 464.11 193.46 251.92 502.99 107.58 55.55 178.98 187.36 79.51 107.48 7 E2a_E3a KnownJunction 0 22.30 24.80 63.39 83.04 4.33 30.95 16.47 25.47 41.35 93.48 426.48 205.57 114.28 815.83 365.29 496.37 298.92 162.21 122.07 229.65 114.84 161.66 217.33 8 E2a_E4a KnownJunction 0 0.00 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER3a ExonRegion 1 11.96 18.77 61.98 88.49 8.50 39.19 14.75 27.62 33.15 92.58 331.17 131.02 55.54 510.63 271.24 476.01 249.01 196.25 83.21 137.40 67.70 117.19 168.52 10 E3a_E4a KnownJunction 1 10.82 14.80 92.34 89.70 50.42 94.49 33.17 34.58 32.73 96.51 331.61 101.73 60.71 145.62 88.88 268.31 330.71 146.79 62.97 89.36 63.38 53.52 119.51 11 ER4a ExonRegion 0 57.65 97.24 82.08 95.16 48.27 198.17 82.57 38.85 42.06 96.25 456.20 308.49 135.86 315.76 143.12 194.67 311.62 66.18 54.74 103.86 60.13 74.39 73.16 12 E4_Da NovelBoundary 0 14.15 5.92 14.19 8.82 19.61 7.21 6.27 8.79 6.60 7.58 34.90 88.68 53.89 23.54 13.35 19.91 38.52 14.05 21.84 31.06 16.68 21.13 10.76 13 E4a_E5a KnownJunction 0 111.87 165.23 73.09 85.07 35.82 36.57 52.07 43.70 45.83 97.59 393.73 355.62 222.87 315.50 148.22 132.27 203.74 42.70 25.04 72.67 50.60 83.52 58.22 14 I4 Intron 0 6.49 10.86 13.18 17.83 10.34 17.35 15.42 7.76 9.94 9.32 20.43 77.32 38.00 25.55 5.36 16.04 20.07 9.52 16.02 22.49 6.57 22.50 10.93 15 I4_AR1 ActiveIntronRegion 0 9.33 9.73 14.14 19.57 8.89 13.62 17.05 8.60 13.19 8.42 26.64 120.02 58.08 30.81 8.05 24.26 25.00 13.64 20.20 32.55 8.29 24.29 14.38 16 I4_SR1 SilentIntronRegion 0 4.89 11.30 20.26 20.93 7.40 15.27 17.18 8.49 11.49 12.04 31.65 102.31 54.15 22.71 5.27 20.75 32.99 13.50 18.68 28.60 7.04 20.29 15.41 17 I4_SR2 SilentIntronRegion 0 5.18 10.62 6.00 12.36 9.09 14.89 14.01 4.65 5.51 7.24 17.05 60.58 26.23 22.64 4.12 11.86 15.08 6.84 13.00 15.52 7.43 20.54 8.82 18 I4_AR3 ActiveIntronRegion 0 7.81 12.34 18.65 23.09 15.06 24.89 16.40 11.30 13.37 11.61 16.45 63.58 34.36 29.28 5.55 14.99 17.82 8.91 16.75 23.36 4.63 26.63 9.74 19 E5_Aa NovelBoundary 1 7.56 3.22 28.86 29.67 31.32 20.78 22.08 14.83 6.68 13.05 7.32 94.98 47.07 25.25 4.45 14.53 7.95 11.44 16.57 18.66 0.00 21.06 25.61 20 ER5a ExonRegion 1 75.42 104.49 75.09 104.04 26.71 79.49 34.87 45.62 32.97 90.18 377.77 361.22 140.93 319.08 111.56 129.63 236.74 27.24 25.76 61.70 18.27 79.51 40.41 21 E5_Da NovelBoundary 0 0.00 12.23 22.44 14.02 11.71 11.53 6.76 6.12 3.21 8.65 0.00 44.71 6.82 9.89 6.30 15.12 0.00 4.15 15.53 11.19 0.00 15.92 12.29 22 E5a_E6a KnownJunction 0 78.53 182.99 93.37 116.24 108.91 123.51 51.01 52.16 39.67 86.82 396.52 628.40 252.09 444.35 188.89 199.35 255.45 31.67 65.41 83.22 8.77 108.57 47.38 23 ER6a ExonRegion 0 53.59 110.57 76.35 110.44 69.16 79.91 39.85 48.28 41.78 80.83 333.47 668.57 277.82 427.53 175.70 161.65 188.04 42.97 59.01 78.72 11.13 87.08 42.41 24 E6_Da NovelBoundary 1 3.78 3.03 14.96 39.52 18.34 36.46 27.65 12.28 9.52 17.43 12.11 61.07 46.91 19.48 14.09 23.41 4.77 12.02 27.11 28.95 2.35 23.39 0.00 25 E6a_E7a KnownJunction 1 51.86 88.67 86.93 142.77 44.40 74.45 62.27 38.40 43.89 74.84 258.70 922.80 203.88 354.58 171.83 107.75 196.26 32.67 46.97 75.61 11.37 69.99 46.44 26 I6 Intron 0 10.63 18.81 24.77 24.69 10.84 22.78 21.69 9.53 14.27 17.16 21.80 68.85 36.23 29.88 17.24 17.28 17.45 7.46 12.06 31.11 5.44 15.78 8.79 27 I6_SR1 SilentIntronRegion 0 10.66 18.87 24.85 24.77 10.88 22.84 21.76 9.56 14.32 17.22 21.87 69.06 36.35 29.98 17.30 17.34 17.51 7.48 12.11 31.21 5.45 15.84 8.83 28 E7_Aa NovelBoundary 1 32.38 27.43 3.37 61.53 36.16 49.46 21.29 24.64 4.25 16.06 9.11 130.39 104.38 7.18 16.07 7.60 0.00 6.55 4.71 31.00 8.22 24.06 15.02 29 ER7a ExonRegion 0 72.14 116.29 104.28 172.70 61.24 107.42 71.51 45.11 40.13 83.47 314.46 701.74 200.02 260.61 124.59 143.33 227.99 35.71 42.49 71.11 16.48 76.03 59.81 30 E7_Da NovelBoundary 0 6.37 35.91 77.53 42.32 4.07 25.04 19.30 10.15 18.78 22.21 2.68 41.41 34.09 6.83 8.90 8.29 12.81 11.86 12.05 15.40 7.78 21.31 4.35 31 E7a_E8a KnownJunction 0 140.40 142.74 111.29 178.87 127.16 162.29 126.53 71.30 65.80 96.68 413.79 827.52 256.15 502.45 210.40 247.63 269.19 30.43 44.80 98.05 25.51 92.34 62.66 32 E8_Aa NovelBoundary 0 42.08 35.59 41.04 46.55 33.70 59.06 81.61 12.77 15.51 20.93 14.48 51.77 25.97 14.72 4.57 7.52 4.77 8.87 15.34 31.58 2.53 16.17 6.74 33 ER8a ExonRegion 0 146.94 172.82 136.03 248.68 108.14 178.78 82.77 56.86 56.72 87.42 426.24 867.20 265.96 523.87 264.07 247.72 280.33 63.40 66.53 118.63 39.19 120.47 66.57 34 E8_Da NovelBoundary 0 11.19 36.64 29.66 43.45 8.66 11.75 18.33 8.83 19.04 8.09 9.05 30.61 6.82 2.30 0.00 3.50 3.55 2.57 4.80 2.88 3.27 19.96 3.50 35 E8a_E9a KnownJunction 0 179.66 175.17 75.43 197.78 89.22 172.74 90.89 55.12 68.37 72.88 393.63 883.64 150.48 250.81 167.25 189.69 220.66 60.73 49.41 113.26 26.01 107.34 63.25 36 I8 Intron 0 5.52 20.17 23.77 24.63 11.09 17.74 13.58 7.67 8.59 11.49 9.14 29.56 9.36 7.39 3.34 6.11 4.36 4.86 11.05 13.86 1.63 11.32 4.42 37 I8_SR1 SilentIntronRegion 0 10.40 34.34 33.68 24.32 7.24 20.66 11.37 6.40 9.81 11.44 12.00 43.17 7.82 11.04 7.35 10.19 12.04 6.28 21.78 14.45 2.04 13.83 5.79 38 I8_AR3 ActiveIntronRegion 0 5.07 27.44 30.77 19.57 11.13 19.82 14.90 5.89 9.43 10.71 8.12 15.74 14.31 7.21 4.62 10.24 8.41 6.55 13.45 13.76 2.87 11.94 5.96 39 I8_SR2 SilentIntronRegion 0 5.19 17.52 21.49 20.30 6.88 15.25 13.39 6.71 4.76 7.06 6.62 22.37 11.46 6.87 3.75 4.30 1.88 5.90 8.32 13.44 1.26 12.77 4.46 40 I8_AR4 ActiveIntronRegion 0 5.77 17.27 20.47 30.45 14.35 14.22 13.82 11.70 11.41 14.20 8.44 37.43 5.16 7.50 2.36 4.18 1.61 3.54 6.49 13.94 1.08 11.51 2.31 41 I8_SR3 SilentIntronRegion 0 7.50 20.49 34.09 37.65 13.62 25.98 16.51 5.09 6.95 14.96 14.72 32.45 9.30 9.62 3.82 6.03 1.91 5.04 17.94 16.48 1.28 9.21 7.64 42 ER9a ExonRegion 0 177.70 181.82 120.95 251.41 78.15 139.17 71.96 60.22 70.24 81.46 339.61 586.75 114.59 305.77 207.44 184.59 225.04 61.22 54.39 110.19 34.45 111.26 69.11 43 E9a_E10a KnownJunction 0 340.06 209.30 180.36 316.34 103.82 184.61 113.85 70.85 94.07 115.94 467.70 715.88 183.92 608.75 407.57 335.38 306.12 109.56 98.73 150.21 48.12 139.67 111.91 44 E10_Aa NovelBoundary 0 9.41 15.33 46.45 7.72 25.04 20.73 10.25 8.30 3.59 5.10 4.47 27.01 0.00 7.00 10.38 4.10 0.00 2.57 12.52 24.29 0.00 5.88 0.00 45 ER10a ExonRegion 0 205.44 162.65 180.56 322.40 82.78 132.18 102.16 110.92 83.46 110.67 356.79 639.32 156.71 652.87 333.18 356.80 249.30 103.53 86.91 122.29 53.24 144.09 102.74 46 E10a_E11a KnownJunction 0 220.41 172.67 214.63 354.07 99.24 84.78 93.54 131.60 84.40 104.36 365.30 613.70 143.66 433.46 257.62 301.80 254.42 71.55 85.08 157.36 85.19 143.04 102.86 47 E11_Aa NovelBoundary 0 14.67 18.48 39.06 8.12 13.58 33.50 8.39 6.61 3.59 9.75 0.00 6.30 13.64 13.71 8.90 0.00 0.00 3.81 9.32 20.52 0.00 0.00 0.00 48 ER11a ExonRegion 0 89.77 129.24 125.11 176.32 79.38 106.74 58.80 70.57 54.42 74.98 140.39 369.26 96.21 149.59 152.33 85.72 78.87 23.48 35.27 76.48 14.39 92.30 31.33 49 IG9 Intergenic 0 3.52 47.63 11.20 40.00 16.72 26.39 12.41 16.69 16.09 12.20 5.10 39.71 24.78 15.38 2.64 11.08 10.03 7.86 6.67 43.49 2.21 16.48 9.09 50 IG9_AR2 ActiveIntergenicRegion 0 0.58 30.26 5.54 22.95 10.33 10.11 4.38 8.52 9.13 8.01 2.66 50.95 13.99 7.50 3.29 4.92 2.73 2.55 3.51 33.41 0.61 5.17 4.86 51 IG9_SR1 SilentIntergenicRegion 0 4.29 60.24 13.27 43.29 18.27 21.39 11.52 17.40 15.42 9.30 4.02 30.66 22.95 14.04 2.28 11.00 8.77 7.34 5.91 38.31 2.40 16.91 8.26 52 IG9_AR1 ActiveIntergenicRegion 0 3.19 32.74 9.63 40.00 16.23 39.46 16.32 18.09 19.35 18.18 7.60 50.98 31.08 19.97 3.02 13.09 14.30 10.34 8.86 55.03 2.39 19.28 11.75