Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AP006287.3 Gene 0 14.66 5.01 9.82 11.68 8.50 5.62 13.49 12.75 7.80 14.48 4.26 5.25 4.06 5.04 10.36 10.55 8.79 10.55 7.93 5.30 6.43 3.64 10.00 2 498949 Transcript 0 7.38 2.52 4.94 5.88 4.28 2.83 6.79 6.42 3.92 7.28 2.14 2.64 2.04 2.54 5.21 5.31 4.42 5.56 3.99 2.67 3.24 1.83 5.03 3 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.50 0.00 0.00 0.00 0.00 0.00 4 Ix Intron 0 43.42 24.88 11.24 21.82 29.61 6.30 30.86 21.87 15.66 11.52 1.03 7.03 24.52 1.86 13.66 7.67 9.43 8.56 2.76 31.15 4.08 1.24 7.71 5 Ix_AR21 ActiveIntronRegion 0 38.60 20.91 11.00 33.62 26.30 3.44 28.57 19.31 10.41 7.23 0.00 9.84 17.66 0.28 11.15 2.56 8.02 4.27 1.00 31.81 3.22 0.22 4.03 6 Ix_SR11 SilentIntronRegion 0 38.01 24.91 9.80 22.85 26.96 5.14 25.49 19.32 14.31 10.96 1.01 6.77 17.29 2.26 14.27 7.57 9.42 10.15 2.90 29.22 4.60 1.06 7.21 7 Ix_AR20 ActiveIntronRegion 0 61.38 53.55 44.73 47.93 81.16 17.42 42.59 54.45 27.38 33.45 0.97 8.66 46.90 3.79 13.54 5.94 13.20 11.09 0.00 24.11 0.00 2.08 8.81 8 Ix_AR19 ActiveIntronRegion 0 66.79 54.23 45.34 46.64 93.35 19.97 48.10 54.73 27.72 32.37 2.36 8.66 44.82 3.25 8.38 5.94 9.17 10.88 0.00 23.40 0.00 3.94 8.48 9 Ix_AR18 ActiveIntronRegion 0 63.28 58.97 42.89 42.25 89.64 18.34 37.73 49.26 29.64 31.65 4.83 8.23 45.49 3.25 10.44 10.70 4.62 9.24 6.05 36.38 0.00 4.38 9.69 10 Ix_AR17 ActiveIntronRegion 0 55.73 54.45 37.99 41.80 85.33 15.69 41.04 53.39 29.51 35.30 5.80 4.33 35.96 1.80 7.41 16.51 6.60 8.83 6.37 42.32 0.24 4.17 9.14 11 Ix_AR16 ActiveIntronRegion 0 54.34 35.72 20.05 24.43 45.70 9.46 28.07 35.63 23.26 20.61 2.50 5.94 17.54 2.38 12.09 11.11 7.66 6.02 1.22 26.64 3.05 2.15 6.22 12 Ix_SR10 SilentIntronRegion 0 52.02 37.42 19.51 30.23 44.11 6.74 28.36 26.76 20.88 17.90 1.30 8.43 16.66 2.81 14.45 2.25 7.73 5.20 1.57 33.79 2.22 2.06 8.29 13 Ix_AR15 ActiveIntronRegion 0 61.57 49.56 27.16 37.91 55.44 13.55 43.38 37.60 28.33 22.17 2.08 8.58 24.42 3.05 13.41 7.67 10.41 14.19 1.35 40.79 3.33 1.39 14.43 14 Ix_SR9 SilentIntronRegion 0 132.85 142.58 37.76 55.52 57.52 12.62 40.95 44.40 33.87 20.16 0.49 7.75 27.97 3.69 15.76 11.91 14.82 17.50 4.54 47.33 4.99 3.05 11.57 15 Ix_AR14 ActiveIntronRegion 0 84.21 53.11 17.39 29.95 62.46 6.20 40.47 35.21 25.16 18.64 0.59 7.24 35.99 1.69 12.27 7.30 11.66 5.50 4.89 17.32 1.02 1.60 7.22 16 Ix_SR8 SilentIntronRegion 0 60.65 24.66 15.45 23.91 39.96 9.58 39.49 26.82 20.17 14.13 1.28 8.55 43.27 2.12 16.92 8.46 10.81 5.67 1.86 36.17 5.58 2.03 8.70 17 Ix_AR13 ActiveIntronRegion 0 65.56 21.20 11.14 24.61 33.86 6.44 47.28 13.35 13.92 12.33 1.04 8.57 48.93 1.99 14.68 10.79 13.67 5.92 5.35 49.38 4.30 1.53 6.09 18 Ix_SR7 SilentIntronRegion 0 56.89 16.63 4.77 4.33 23.75 5.25 21.63 8.23 8.44 6.39 0.45 7.57 16.80 1.64 9.85 7.38 10.59 5.93 0.96 27.83 3.50 2.05 3.53 19 Ix_AR11 ActiveIntronRegion 0 60.58 24.84 16.64 25.29 45.81 12.75 45.93 25.40 17.22 11.50 2.49 4.88 33.89 3.35 20.86 11.55 17.85 15.91 2.20 46.28 6.46 0.98 19.68 20 Ix_SR6 SilentIntronRegion 0 36.06 16.34 7.76 18.14 25.26 7.15 29.65 15.75 10.69 6.97 0.88 4.79 21.42 1.84 16.24 7.11 8.87 8.04 2.56 30.05 2.98 1.45 7.63 21 Ix_AR6 ActiveIntronRegion 0 34.54 13.49 7.11 19.54 30.85 7.81 38.34 18.45 11.91 9.51 1.15 8.48 20.27 0.54 19.38 7.64 7.95 6.54 0.48 25.13 3.42 0.93 10.91 22 Ix_AR5 ActiveIntronRegion 0 34.14 14.50 8.26 9.95 33.27 2.71 62.23 5.86 9.83 9.08 0.00 0.00 32.63 0.00 15.01 14.09 7.03 9.88 0.00 24.14 4.41 0.00 7.92 23 Ix_SR5 SilentIntronRegion 0 46.14 26.72 10.61 15.54 31.07 7.27 41.66 10.90 11.09 7.22 0.31 11.35 45.71 1.20 15.91 4.43 5.11 4.86 2.05 30.37 3.24 1.00 6.69 24 Ix_SR4 SilentIntronRegion 0 37.63 17.54 8.14 18.38 23.69 5.43 30.36 18.29 12.98 10.41 0.81 7.22 29.74 1.43 12.94 7.08 7.78 5.32 2.10 28.92 3.07 1.32 6.84 25 Ix_AR3 ActiveIntronRegion 0 27.46 17.89 9.69 19.75 27.22 11.19 36.03 18.11 21.32 10.19 1.08 10.72 25.98 1.32 10.22 12.83 11.68 5.41 1.97 39.28 6.27 1.80 8.93 26 Ix_SR3 SilentIntronRegion 0 26.23 14.18 15.72 20.64 23.77 9.81 44.44 23.00 19.76 14.36 1.51 9.66 30.93 0.12 18.75 12.71 15.02 3.59 2.35 43.32 3.16 1.60 3.79 27 Ix_AR2 ActiveIntronRegion 0 28.09 12.23 8.54 23.12 25.66 9.08 42.70 26.85 16.71 13.32 2.13 10.82 36.62 0.84 11.14 6.60 12.73 7.62 0.64 34.51 1.98 3.00 7.59 28 Ix_SR2 SilentIntronRegion 0 46.71 22.71 12.60 20.24 33.21 6.24 34.38 31.56 20.32 14.59 1.12 6.85 24.86 1.76 14.36 8.90 9.90 10.28 3.65 34.14 4.44 1.07 8.71 29 Ix_AR1 ActiveIntronRegion 0 23.98 16.80 8.43 11.96 16.79 4.55 27.62 31.58 24.27 19.12 2.09 5.44 36.53 1.09 9.00 12.25 14.08 14.01 6.58 41.21 8.70 0.42 12.58 30 Ix_AR2 ActiveIntronRegion 0 89.67 24.10 24.91 38.65 42.25 53.31 46.58 36.08 42.30 67.50 29.16 32.11 63.38 43.23 39.35 33.09 33.19 22.45 35.47 18.34 21.37 29.92 25.31 31 Ix Intron 0 5.25 7.95 5.22 9.29 11.22 14.16 11.99 16.70 21.93 33.89 16.40 13.82 6.26 21.92 16.14 13.32 16.36 15.24 14.88 17.85 3.78 5.76 10.64 32 Ix_AR2 ActiveIntronRegion 0 6.76 10.25 6.73 11.98 14.47 18.25 15.29 21.52 28.27 43.69 21.14 16.50 6.17 26.64 19.79 17.17 21.09 19.64 19.19 22.75 4.87 7.43 13.71 33 I1_SR1 SilentIntronRegion 0 11.36 9.64 9.05 7.70 9.84 2.93 12.01 13.63 5.19 13.87 3.50 4.22 4.76 1.81 8.34 9.56 6.62 7.36 5.20 9.55 1.59 2.08 2.66 34 I1_AR1 ActiveIntronRegion 0 30.99 11.67 22.66 17.06 9.44 7.11 21.35 24.87 9.01 32.12 7.07 10.37 6.09 2.83 22.36 23.81 14.26 19.42 11.97 21.31 3.76 6.41 6.56 35 E2_Aa NovelBoundary 0 3.56 0.00 30.87 5.06 3.74 11.98 6.76 31.26 23.61 12.84 2.42 0.00 0.00 5.47 4.45 11.62 4.58 6.30 13.84 3.26 5.81 3.12 4.18 36 ER2a ExonRegion 0 14.75 5.04 9.89 11.76 8.56 5.65 13.57 12.83 7.84 14.57 4.29 5.28 4.09 5.07 10.43 10.62 8.84 10.61 7.98 5.33 6.47 3.67 10.06