Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AP000944.1 Gene 0 2527.20 108.99 335.57 1121.44 1281.08 213.86 350.18 936.06 1108.66 305.53 1152.27 1525.98 1506.37 1611.90 1641.27 1268.98 552.45 92.96 6.94 82.65 1835.37 1913.94 2624.17 2 499732 Transcript 0 412.14 16.46 142.95 370.76 438.83 135.69 152.11 440.02 591.46 160.71 689.21 399.43 669.04 1129.73 850.10 850.17 377.53 80.66 4.52 44.70 1606.87 814.18 1858.45 3 501122 Transcript 0 1766.05 74.42 193.17 677.41 747.80 105.51 198.87 493.33 589.25 162.71 652.75 1068.82 876.74 851.79 870.35 559.88 272.73 28.03 2.19 45.03 724.29 1148.72 1170.13 4 IG8_SR4 SilentIntergenicRegion 0 12.90 4.32 8.52 6.87 11.35 0.94 4.93 5.39 7.02 4.39 4.39 15.69 1.16 1.84 7.61 5.86 1.17 2.19 3.13 1.50 1.11 1.69 7.92 5 IG8_AR4 ActiveIntergenicRegion 0 9.41 1.86 7.16 10.46 3.69 2.84 2.35 4.87 9.23 4.91 6.94 20.05 0.43 5.78 7.44 4.37 4.56 5.65 2.80 1.37 4.86 6.33 6.65 6 ER1a ExonRegion 1 260.04 14.80 132.96 263.36 429.57 177.22 177.31 396.98 592.47 172.06 771.27 295.57 653.23 1390.03 991.50 971.32 494.21 86.58 3.99 48.25 2155.70 820.22 2446.17 7 E1_Da NovelBoundary 0 358.06 18.48 181.51 389.69 161.04 52.75 66.86 601.45 800.14 221.45 768.72 381.42 577.07 1563.20 1353.49 1092.36 433.75 120.30 0.00 72.48 2060.03 1050.52 2261.44 8 E1a_E2a KnownJunction 0 55.64 0.00 1.77 20.24 3.48 7.44 2.25 31.67 38.77 14.72 91.39 44.56 32.79 57.68 95.43 11.36 4.30 4.64 0.00 6.52 14.64 16.90 50.28 9 I1 Intron 1 376.73 24.33 155.21 318.85 253.28 85.44 117.82 448.67 585.23 172.19 668.14 243.63 371.17 1263.16 927.80 888.32 419.83 100.04 2.01 49.12 1886.46 894.28 1848.45 10 I1_AR1 ActiveIntronRegion 1 379.81 24.52 156.49 321.46 255.36 86.15 118.79 452.34 590.01 173.62 673.63 245.54 374.13 1273.46 935.40 895.62 423.23 100.87 2.02 49.53 1901.81 901.60 1863.55 11 E2_Aa NovelBoundary 0 801.18 67.09 381.00 946.03 681.07 218.28 317.26 963.88 1226.09 335.43 1377.03 986.72 1245.21 1821.36 1416.04 1520.28 643.66 175.60 8.75 105.14 3017.76 1492.63 3064.71 12 ER2a ExonRegion 0 920.74 34.60 294.12 828.68 883.45 222.42 276.76 891.41 1143.13 295.36 1204.97 858.14 1321.10 1941.48 1463.38 1567.82 634.08 150.75 9.58 79.32 2650.28 1605.43 3078.90 13 E2_Ab KnownBoundary 0 1461.00 9.60 399.72 1033.80 1330.99 245.88 306.49 956.66 1143.83 291.34 1324.76 1271.36 1571.65 1854.97 1425.56 1963.67 695.56 149.65 13.93 48.51 2465.04 1415.35 3166.97 14 ER2b ExonRegion 0 1179.33 36.68 311.53 1015.17 1223.50 205.08 330.53 741.33 968.17 236.35 1092.20 1275.02 1673.45 2062.39 1310.87 1560.91 599.43 123.67 9.63 69.13 1987.82 1220.12 3020.63 15 E2_Da KnownBoundary 0 681.97 18.68 209.34 449.76 307.13 51.62 151.65 312.12 584.86 168.10 756.51 915.90 1174.11 1073.17 697.70 617.70 398.41 35.82 0.00 49.02 1152.83 801.24 1329.53 16 ER2c ExonRegion 0 543.24 13.84 122.29 345.09 331.07 65.76 115.05 204.91 383.34 91.22 600.59 646.92 515.06 970.85 448.02 445.13 268.39 21.20 0.08 29.95 820.29 613.01 1009.87 17 E2_Db NovelBoundary 0 3604.27 62.36 234.23 988.65 2819.70 217.37 721.18 574.05 901.67 213.53 1060.95 1598.62 2240.76 3157.88 1730.52 1744.16 799.34 64.54 4.61 125.60 1647.60 974.10 4285.57 18 E2b_E3a KnownJunction 0 28.89 0.00 0.00 0.00 23.26 15.50 6.89 0.00 0.00 0.00 26.69 87.78 164.60 135.50 9.64 26.66 10.94 0.00 0.00 0.00 28.91 50.15 49.94 19 I2 Intron 0 1112.64 23.93 108.80 208.67 504.56 84.08 164.93 146.53 211.20 62.86 329.38 367.23 550.42 785.05 478.87 541.47 165.92 28.39 3.12 28.17 683.96 536.92 1193.93 20 I2_AR1 ActiveIntronRegion 0 1122.93 24.14 109.83 210.65 509.31 84.88 166.47 147.90 213.17 63.45 332.51 370.53 555.29 792.27 483.37 546.55 167.46 28.66 3.15 28.44 690.34 541.89 1204.91 21 E3_Aa NovelBoundary 0 6339.79 142.15 399.66 1314.72 2238.88 401.93 620.27 817.95 1057.71 314.10 1287.22 826.62 1154.79 3157.53 1798.76 2156.27 569.05 71.88 8.47 66.99 1579.28 3012.38 5154.74 22 ER3a ExonRegion 0 4726.02 209.42 457.22 1687.13 1889.07 235.28 474.68 1275.09 1384.41 396.91 1330.97 2471.75 1950.56 1449.02 2153.38 1207.83 538.87 62.89 6.48 105.14 1323.67 2783.02 2450.59 23 IG9 Intergenic 0 110.76 7.56 85.57 70.65 77.42 10.09 119.05 142.64 171.62 28.09 22.18 84.36 60.79 13.18 82.75 50.70 93.66 11.05 1.08 3.71 573.92 119.48 435.24 24 IG9_AR1 ActiveIntergenicRegion 0 110.77 7.56 85.58 70.66 77.43 10.09 119.06 142.66 171.64 28.09 22.18 84.37 60.80 13.19 82.75 50.70 93.67 11.05 1.08 3.71 573.98 119.50 435.29