Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RBM14 Gene 0 81.60 124.90 130.12 119.44 72.20 118.52 94.56 153.99 120.33 208.75 262.58 90.81 65.22 270.82 229.47 223.35 217.61 300.83 122.51 169.53 71.84 61.75 78.06 2 310137 Transcript 0 75.86 57.80 87.99 49.30 36.80 70.65 48.48 90.12 69.87 123.27 166.91 56.05 62.68 185.34 173.12 124.15 156.21 153.17 68.87 93.50 51.59 31.43 39.40 3 409738 Transcript 0 0.00 0.00 0.00 1.90 0.00 0.00 0.00 1.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 8.47 2.94 5.07 0.00 0.00 4 409372 Transcript 0 13.46 18.57 1.48 6.42 10.60 31.17 16.10 12.56 10.85 4.32 33.43 19.06 25.42 20.68 18.60 25.86 25.20 20.06 23.56 27.29 11.26 3.25 16.74 5 393979 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.58 0.00 0.00 0.00 0.00 0.00 4.77 0.00 0.00 0.00 0.00 0.00 0.00 6 443702 Transcript 0 6.46 12.08 1.47 2.15 4.43 9.72 11.29 0.92 1.79 3.02 3.75 9.11 6.74 4.55 6.97 3.89 9.07 6.98 8.13 20.07 2.96 2.37 5.13 7 460762 Transcript 0 1.98 0.00 2.60 1.81 0.00 0.61 0.18 1.96 2.14 2.74 3.95 0.00 0.00 2.06 1.45 1.88 0.55 6.55 2.34 4.44 1.40 1.82 3.13 8 461478 Transcript 0 0.00 0.00 0.00 1.27 0.00 4.88 0.00 2.46 1.62 1.37 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 3.13 3.03 0.00 0.00 9 496694 Transcript 1 20.70 29.54 12.94 17.50 26.02 27.69 33.01 33.71 30.10 31.19 17.83 35.65 21.56 18.08 18.10 31.06 26.68 32.51 27.67 45.78 10.33 9.67 23.52 10 IG8_SR1 SilentIntergenicRegion 0 2.15 5.91 9.34 8.59 10.99 8.21 9.35 18.20 15.40 8.99 2.66 3.69 5.61 6.72 4.69 3.21 5.98 3.91 1.74 7.79 0.91 0.72 6.53 11 ER1a ExonRegion 0 1.98 4.02 3.54 0.67 2.85 4.89 3.24 2.23 3.07 2.24 8.81 0.00 0.00 4.37 6.25 6.80 4.99 7.10 1.63 3.50 0.98 1.06 4.31 12 E1_Ab KnownBoundary 0 0.00 0.00 2.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 4.27 0.00 0.00 0.00 0.00 0.00 13 E1_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 E1_Ad KnownBoundary 0 0.00 3.35 1.83 0.00 4.24 0.00 2.16 0.00 0.00 0.00 2.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 E1_Ae KnownBoundary 0 45.79 40.26 18.72 13.48 25.04 76.43 68.98 26.08 23.81 24.66 43.59 0.00 0.00 7.65 4.45 70.84 66.67 92.69 32.57 30.36 14.76 11.70 26.12 16 ER1b ExonRegion 0 12.70 20.34 8.58 2.73 13.38 29.34 22.51 12.10 11.12 10.32 34.79 0.00 0.00 17.87 23.21 32.69 29.71 29.56 6.37 14.89 4.41 6.25 14.68 17 ER1c ExonRegion 0 12.70 20.34 8.58 2.73 13.38 29.34 22.51 12.10 11.12 10.32 34.79 0.00 0.00 17.87 23.21 32.69 29.71 29.56 6.37 14.89 4.41 6.25 14.68 18 ER1d ExonRegion 0 35.84 33.76 8.58 2.73 13.38 29.34 22.51 12.21 11.12 10.32 34.79 0.00 0.00 17.87 24.56 32.69 29.71 29.19 6.37 14.89 4.41 6.25 14.68 19 ER1e ExonRegion 0 15.79 41.19 41.01 18.01 7.46 29.19 20.28 29.20 18.25 52.27 92.33 19.93 10.35 113.35 65.61 61.85 67.83 93.53 26.81 51.82 17.74 22.53 12.58 20 E1a_E3a KnownJunction 0 3.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 5.75 0.00 0.00 0.00 21 E1a_E6a KnownJunction 0 0.00 0.00 0.00 1.60 0.00 0.00 0.00 2.55 0.00 0.00 2.42 0.00 0.00 3.00 6.30 4.10 0.00 4.39 0.00 0.00 9.27 0.00 0.00 22 E1a_E7a KnownJunction 1 36.90 152.93 172.47 75.68 19.44 55.31 33.92 110.37 76.45 222.60 429.21 129.64 39.77 465.72 238.71 231.05 247.69 418.43 120.85 196.48 68.57 75.62 52.75 23 E1a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.58 0.00 0.00 0.00 0.00 0.00 4.77 0.00 0.00 0.00 0.00 0.00 0.00 24 ER2a ExonRegion 0 3.95 0.00 0.00 0.00 0.00 1.22 0.35 1.38 1.15 0.92 3.22 0.00 0.00 4.11 2.90 3.76 1.10 8.87 4.67 5.82 2.79 1.25 6.26 25 ER2b ExonRegion 0 6.50 11.20 10.78 20.95 4.71 21.72 21.06 25.09 36.54 38.08 14.63 5.62 6.22 27.58 27.64 33.04 33.92 82.79 32.21 61.01 19.69 5.13 20.76 26 E2_Da NovelBoundary 0 0.00 22.82 8.96 30.73 12.99 16.92 23.05 38.12 72.34 61.16 33.48 18.76 26.95 26.31 52.29 63.40 79.85 121.54 51.77 125.98 35.21 3.06 71.53 27 E2a_E3a KnownJunction 0 0.00 0.00 5.20 3.63 0.00 0.00 0.00 2.55 3.12 4.57 4.69 0.00 0.00 0.00 0.00 0.00 0.00 4.23 0.00 3.07 0.00 2.39 0.00 28 E2a_E7a KnownJunction 0 0.00 0.00 0.00 1.27 0.00 4.88 0.00 2.46 1.62 1.37 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 3.13 3.03 0.00 0.00 29 Ix Intron 0 31.30 43.79 24.05 49.32 35.24 62.05 81.53 67.56 87.31 81.73 45.90 36.18 36.40 43.29 40.01 78.44 73.22 126.62 71.34 120.92 36.74 14.28 67.36 30 Ix_SR1 SilentIntronRegion 0 31.36 43.88 24.10 49.43 35.31 62.18 81.70 67.70 87.50 81.90 46.00 36.26 36.48 43.38 40.09 78.61 73.37 126.89 71.49 121.17 36.82 14.31 67.50 31 E3_Aa NovelBoundary 0 78.83 97.29 34.03 105.15 67.74 65.47 125.33 97.10 92.01 125.02 61.38 73.37 79.22 53.45 56.62 103.73 119.21 118.10 66.26 174.49 19.58 20.82 56.34 32 ER3a ExonRegion 1 16.59 46.94 1.39 3.50 15.62 32.76 33.81 1.73 0.83 5.95 13.63 33.58 26.11 14.09 28.86 19.36 28.73 14.53 29.10 65.73 14.06 9.18 19.68 33 E3_Da NovelBoundary 1 43.49 110.18 23.89 63.30 56.45 79.61 123.96 36.35 79.92 70.14 33.64 69.02 53.89 41.97 58.35 55.11 63.02 88.21 70.59 162.86 25.21 16.90 47.80 34 E3_Db NovelBoundary 1 60.16 92.48 14.61 46.18 71.73 49.86 102.55 43.21 72.77 59.98 28.32 90.78 88.63 44.15 26.70 72.20 53.39 74.74 34.82 119.59 27.18 14.51 42.85 35 E3b_E7a KnownJunction 0 0.00 0.00 1.83 3.66 0.00 0.00 0.00 1.81 3.27 5.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.38 0.00 2.36 0.00 0.00 0.00 36 ER3b ExonRegion 1 15.91 36.25 2.58 2.77 13.29 29.15 33.88 0.95 2.09 4.07 11.26 27.32 20.22 13.66 20.91 11.68 27.20 11.98 24.38 52.09 8.89 7.11 15.39 37 Ix Intron 0 40.90 113.81 46.85 78.27 63.00 63.32 102.89 79.69 94.06 81.03 43.27 69.02 59.14 49.95 50.71 81.28 72.15 104.69 81.07 153.22 35.59 22.88 75.04 38 Ix_SR1 SilentIntronRegion 0 47.92 117.07 38.61 76.40 62.49 63.39 103.67 78.36 94.07 81.92 42.75 62.71 62.06 53.21 47.74 85.88 71.84 104.51 81.06 143.48 34.49 21.67 75.44 39 Ix_AR1 ActiveIntronRegion 0 31.59 110.43 58.71 81.63 64.34 63.85 102.81 82.32 94.98 80.61 44.43 78.42 55.68 45.93 55.31 75.72 73.26 105.98 81.87 168.16 37.46 24.78 75.20 40 E4_Aa NovelBoundary 0 65.05 226.67 58.75 116.47 89.90 136.46 210.88 150.50 137.21 136.03 80.86 49.67 74.18 51.50 80.10 142.87 73.21 96.59 123.02 207.28 35.89 30.49 68.97 41 ER4a ExonRegion 1 41.08 63.60 39.92 57.91 48.37 52.69 73.41 101.09 98.37 83.79 50.16 83.76 57.05 42.64 47.18 73.83 68.82 92.70 65.32 127.17 25.72 26.09 68.36 42 E4_Da NovelBoundary 1 33.93 35.91 30.57 68.19 54.41 53.49 71.10 138.34 99.33 116.29 36.06 87.78 66.88 83.29 101.86 94.33 47.87 116.40 114.07 128.79 21.81 35.64 54.38 43 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44 Ix Intron 0 40.68 84.17 37.17 86.06 64.99 67.85 105.20 99.02 89.27 88.20 48.12 70.63 49.98 36.82 45.80 72.42 60.19 79.42 68.69 114.79 20.34 22.86 45.55 45 Ix_SR1 SilentIntronRegion 0 0.00 12.08 0.00 0.00 5.35 10.97 11.86 0.00 0.00 0.00 15.39 34.64 19.31 10.29 19.23 8.92 13.07 0.00 15.93 16.90 2.20 2.08 0.00 46 Ix_SR2 SilentIntronRegion 0 44.15 90.35 40.34 93.40 70.10 72.73 113.20 107.46 96.89 95.73 50.96 73.81 52.66 39.12 48.13 77.86 64.25 86.20 73.25 123.18 21.90 24.64 49.44 47 E5_Aa NovelBoundary 1 208.19 136.09 61.12 182.86 131.41 105.34 176.83 170.83 171.84 204.63 80.39 188.46 97.72 78.17 64.40 100.74 99.49 107.20 130.64 175.77 37.68 43.48 67.44 48 ER5a ExonRegion 1 41.74 54.58 11.82 12.09 55.70 58.09 58.62 33.75 22.05 40.97 21.18 58.84 29.20 29.67 25.21 50.43 37.91 37.35 45.35 55.94 15.62 12.57 25.74 49 E5_Da NovelBoundary 1 57.86 85.84 46.98 139.38 101.44 140.77 278.62 135.13 114.06 132.91 63.44 118.84 40.58 30.49 55.88 106.38 68.54 115.49 98.54 134.61 36.14 30.68 80.84 50 E5a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51 Ix Intron 0 73.63 135.24 53.39 125.99 86.94 123.94 143.56 123.43 118.35 125.06 67.90 84.10 62.87 47.45 56.40 98.38 84.24 122.19 83.12 152.94 27.88 23.55 62.51 52 Ix_AR1 ActiveIntronRegion 0 26.49 49.95 22.00 43.21 41.44 77.46 87.41 51.99 52.41 55.35 29.63 50.28 40.15 33.30 46.11 62.31 50.61 57.37 45.85 84.88 18.96 12.06 40.43 53 Ix_AR2 ActiveIntronRegion 0 89.53 164.06 64.12 153.78 102.80 141.32 164.35 147.92 141.09 149.09 81.08 96.40 71.26 53.06 60.58 111.94 96.63 144.74 96.51 177.43 31.36 27.61 70.88 54 E6_Aa NovelBoundary 0 161.81 271.40 96.80 279.68 129.80 189.38 190.83 276.47 267.33 276.76 142.88 175.86 165.09 80.35 100.75 203.02 160.54 216.30 151.82 261.87 67.09 33.74 148.87 55 ER6a ExonRegion 0 36.82 55.71 0.77 15.59 31.79 80.28 48.31 19.47 13.42 11.49 74.19 50.87 69.59 41.32 36.14 62.28 66.07 41.66 62.21 75.41 18.47 6.80 43.23 56 E6_Da NovelBoundary 1 174.55 215.03 147.93 228.21 186.25 220.16 248.90 309.74 227.83 282.08 81.28 216.52 80.19 95.06 158.72 219.52 79.48 274.88 178.83 246.21 23.29 38.76 107.90 57 E6a_E7a KnownJunction 0 3.56 0.00 3.67 2.06 0.00 13.23 0.00 15.65 19.13 1.48 23.69 6.30 6.66 17.72 13.35 11.19 9.54 14.14 8.47 6.46 6.05 2.94 7.00 58 Ix Intron 0 83.27 127.42 102.25 150.93 60.71 116.43 100.04 165.15 163.62 171.13 85.70 83.62 52.38 58.77 65.51 139.20 88.65 207.46 116.03 157.67 41.27 31.66 91.08 59 Ix_AR1 ActiveIntronRegion 0 83.96 128.44 103.08 152.15 61.21 117.39 100.86 166.50 164.94 172.51 86.39 84.31 52.77 59.24 66.02 140.31 89.38 209.15 116.95 158.96 41.60 31.92 91.82 60 E7_Aa NovelBoundary 0 147.06 169.64 131.60 193.65 98.81 207.38 161.11 215.15 186.57 178.95 90.29 37.06 33.44 84.94 76.02 129.03 64.33 292.66 104.10 273.05 55.35 22.29 84.42 61 ER7a ExonRegion 0 63.03 167.43 191.43 104.94 47.57 104.32 44.72 142.50 118.30 256.65 506.85 154.42 57.32 511.60 271.75 294.57 310.28 473.43 152.19 242.79 114.35 90.05 87.12 62 ER7b ExonRegion 0 131.97 190.62 278.24 239.04 92.63 190.27 136.74 281.50 232.21 465.14 689.87 214.18 104.70 611.24 349.32 554.18 488.50 806.25 268.16 388.82 162.21 124.87 169.26 63 E7_Db KnownBoundary 0 134.25 188.85 366.25 327.60 120.37 185.35 164.86 401.54 287.01 582.21 677.01 257.33 132.13 644.18 405.34 728.10 574.29 895.31 357.09 421.28 169.02 212.79 214.94 64 E7b_E8a KnownJunction 0 0.00 0.00 0.00 1.90 0.00 0.00 0.00 1.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 8.47 2.94 5.07 0.00 0.00 65 ER7c ExonRegion 0 85.13 135.92 284.53 249.47 63.79 201.77 116.49 347.82 280.86 563.23 669.54 225.37 110.23 611.06 387.65 473.67 589.24 776.03 255.45 348.65 175.08 124.81 150.55 66 E7_Dc KnownBoundary 0 145.06 194.64 303.15 281.12 68.34 214.48 133.37 313.89 290.45 477.42 649.01 302.80 132.46 625.23 463.57 649.23 629.55 799.43 403.40 309.87 160.93 145.37 198.98 67 E7_Dd KnownBoundary 0 125.50 260.15 254.13 223.28 61.88 162.29 127.94 287.31 219.01 413.54 581.09 228.37 93.50 686.98 475.19 586.43 447.87 954.80 258.55 332.43 145.24 198.27 191.21 68 ER7d ExonRegion 0 106.92 192.47 317.77 278.82 52.31 173.09 114.97 342.74 305.51 537.34 683.93 280.02 112.71 666.52 456.15 641.40 549.65 1021.51 321.93 328.62 164.07 160.57 210.11 69 ER7e ExonRegion 0 66.75 165.13 211.47 142.63 48.14 163.79 114.20 181.47 175.65 376.82 461.66 139.23 82.15 543.57 389.96 415.38 493.01 555.74 184.08 273.32 132.52 111.17 122.54 70 E7_De KnownBoundary 0 71.42 137.08 195.97 154.99 60.19 121.12 120.56 223.28 158.56 393.58 380.46 123.64 114.28 496.68 425.86 385.45 351.66 517.79 142.78 231.00 110.52 111.44 125.14 71 ER7f ExonRegion 0 62.91 92.44 124.70 99.07 41.50 116.87 74.83 163.45 126.07 233.79 290.64 85.54 78.28 309.89 245.02 225.30 239.75 377.28 115.95 167.89 87.79 59.77 77.21 72 E7_Df NovelBoundary 0 60.75 85.25 48.02 117.20 18.85 64.96 72.91 60.83 38.89 94.15 27.11 19.36 13.64 34.38 22.99 56.14 17.20 116.82 32.28 55.99 26.56 12.25 58.22 73 E7f_E8a KnownJunction 0 224.93 104.52 216.02 79.74 88.71 144.06 100.91 180.48 143.08 246.40 357.72 138.65 160.38 407.38 418.82 257.71 378.21 217.71 148.80 193.48 113.18 63.68 67.69 74 Ix Intron 1 75.09 98.28 113.14 193.52 47.64 147.35 88.76 139.09 94.47 144.01 73.37 25.35 31.56 55.68 57.53 116.88 95.38 227.62 95.35 130.85 51.02 22.01 77.95 75 Ix_AR1 ActiveIntronRegion 0 75.29 98.53 113.43 194.01 47.76 147.72 88.99 139.44 94.71 144.38 73.56 25.41 31.63 55.82 57.68 117.18 95.62 228.20 95.59 131.19 51.14 22.07 78.15 76 E8_Aa NovelBoundary 0 184.77 78.60 103.46 143.70 26.49 161.55 62.80 135.79 119.88 174.60 37.54 37.36 39.77 61.45 78.37 145.09 97.05 127.22 105.04 146.05 60.05 23.09 67.95 77 ER8a ExonRegion 0 230.18 304.12 303.79 262.33 182.64 276.64 216.63 297.38 229.73 418.21 566.38 162.97 118.81 521.79 526.82 493.79 447.60 565.91 261.35 294.36 133.52 136.27 137.33 78 E8_Da KnownBoundary 0 597.07 282.38 447.68 482.16 194.14 380.29 231.15 450.13 340.62 602.54 996.09 217.27 199.99 560.42 665.93 1044.34 749.23 741.77 614.23 422.17 148.33 288.96 233.98 79 ER8b ExonRegion 0 181.49 300.47 231.45 270.24 221.32 203.48 200.28 265.79 168.50 276.32 361.15 127.06 89.51 431.17 441.66 337.65 263.92 279.56 192.14 247.14 86.46 104.27 121.13 80 ER8c ExonRegion 0 13.61 30.21 7.70 17.72 14.14 16.77 14.94 14.32 7.23 10.65 10.49 0.00 12.06 19.72 22.38 6.79 1.89 10.56 9.10 9.12 4.41 1.19 8.39