Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RIN1 Gene 0 5.94 2.05 16.88 4.27 2.70 2.01 2.81 10.10 5.07 5.57 5.32 0.54 0.42 4.36 1.74 2.73 2.20 5.25 6.70 4.55 194.42 95.66 76.71 2 424433 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 311320 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 434553 Transcript 0 3.51 0.54 7.50 2.42 0.02 2.50 0.79 4.87 3.25 5.00 1.69 0.00 0.00 1.76 1.43 0.06 1.13 0.78 2.20 1.16 50.45 30.01 16.58 5 IG43_AR1 ActiveIntergenicRegion 0 1.06 0.19 2.91 0.84 0.82 1.54 3.36 6.14 2.16 3.00 8.85 1.09 0.00 1.34 3.23 0.91 0.00 3.77 6.47 5.20 1.36 0.36 2.04 6 ER1a ExonRegion 0 11.66 0.97 3.93 1.95 1.28 2.20 2.22 4.10 2.20 0.41 0.93 0.00 0.92 2.24 0.98 2.16 0.79 2.44 8.49 1.02 61.06 35.10 37.25 7 E1a_E2a KnownJunction 0 0.00 0.00 5.06 0.00 0.00 0.00 0.00 2.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29.65 5.45 0.00 8 ER2a ExonRegion 0 0.00 0.01 9.43 1.14 0.75 0.52 0.89 3.52 3.75 1.57 1.33 1.00 1.40 3.65 0.88 1.61 1.59 1.23 6.00 2.74 150.97 69.64 64.43 9 E2a_E3a KnownJunction 0 0.00 0.00 16.29 0.00 0.00 0.00 1.94 6.37 3.12 4.57 2.63 0.00 5.84 0.00 4.45 8.72 8.70 4.39 4.14 3.26 202.94 113.83 136.15 10 E3_Aa NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 8.40 0.00 2.55 5.27 0.00 0.00 0.00 0.00 2.47 4.45 0.00 0.00 1.66 0.00 0.00 22.49 18.19 29.45 11 ER3a ExonRegion 0 2.23 2.39 12.40 3.86 2.37 3.25 6.27 4.66 5.21 3.48 5.85 1.58 0.98 4.86 2.72 5.97 10.02 5.74 13.05 2.94 270.40 120.17 85.95 12 E3a_E4a KnownJunction 0 6.37 6.31 25.72 4.83 0.00 2.44 8.88 9.00 3.53 7.09 7.58 0.00 0.00 4.89 0.00 8.72 4.68 4.27 12.33 3.26 271.76 120.94 97.48 13 ER4a ExonRegion 0 12.82 4.74 21.35 1.25 0.26 1.28 2.72 13.66 3.79 7.42 5.85 0.00 5.97 8.90 2.46 6.55 8.46 8.61 14.49 8.19 350.78 144.13 117.59 14 E4a_E5a KnownJunction 0 12.82 0.00 16.50 1.47 3.23 0.00 0.00 13.84 3.47 10.42 2.68 0.00 0.00 6.71 4.45 4.19 4.68 9.49 7.25 2.62 318.65 179.29 95.95 15 ER5a ExonRegion 0 12.70 0.99 18.97 5.90 3.43 1.14 2.75 8.49 0.83 8.61 2.82 0.00 0.00 4.50 1.99 4.68 5.70 4.10 15.89 5.76 309.81 188.40 122.57 16 E5a_E6a NovelJunction 0 0.00 0.00 13.78 0.00 0.00 0.00 0.00 4.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.68 0.00 0.00 0.00 0.00 0.00 17 E5a_E6b KnownJunction 0 10.82 6.18 24.45 4.59 4.33 11.24 4.42 6.70 1.68 4.27 4.74 0.00 0.00 0.00 0.00 11.71 4.39 6.84 13.74 0.00 310.06 165.76 150.15 18 ER6a ExonRegion 0 3.51 0.54 7.50 2.42 0.02 2.50 0.79 4.87 3.25 5.00 1.69 0.00 0.00 1.76 1.43 0.06 1.13 0.78 2.20 1.16 50.45 30.01 16.58 19 E6_Ab KnownBoundary 0 6.82 2.96 9.17 4.43 0.00 6.47 2.03 3.94 9.40 4.14 2.68 0.00 0.00 0.00 0.00 0.00 0.00 5.64 0.00 3.26 38.92 41.82 60.35 20 ER6b ExonRegion 0 4.54 1.85 21.43 3.75 2.53 2.13 3.65 11.72 4.62 5.86 6.06 0.30 0.27 4.60 1.45 2.77 1.29 9.00 6.24 3.45 207.41 96.14 69.08 21 E6_Da NovelBoundary 0 0.00 0.00 9.91 1.37 0.00 0.00 2.25 11.71 4.57 1.53 3.90 0.00 0.00 4.83 0.00 0.00 0.00 0.00 0.00 0.00 31.63 49.66 23.30 22 E6a_E7a KnownJunction 0 7.41 2.76 7.66 5.96 0.00 2.67 4.20 7.11 3.41 6.15 9.27 0.00 0.00 6.47 0.00 0.00 0.00 6.51 7.44 2.43 221.72 114.45 108.92 23 I6 Intron 0 0.00 0.00 8.94 2.30 2.02 0.00 1.50 4.87 3.48 1.94 2.92 0.00 1.46 0.43 1.55 1.12 0.00 1.74 3.61 0.80 24.14 30.70 21.08 24 I6_AR1 ActiveIntronRegion 0 0.00 0.00 3.93 0.79 2.25 0.00 1.11 0.91 0.00 0.60 0.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.01 0.00 8.23 11.19 15.61 25 I6_SR1 SilentIntronRegion 0 0.00 0.00 9.91 2.59 2.02 0.00 1.59 5.61 4.12 2.19 3.37 0.00 1.73 0.51 1.83 1.33 0.00 2.06 4.11 0.95 27.20 34.49 22.36 26 ER7a ExonRegion 0 4.86 1.14 16.11 5.56 2.37 0.52 2.98 6.41 5.41 5.67 6.78 0.72 0.00 5.60 0.38 2.90 2.43 6.94 6.66 3.59 215.98 111.99 78.05 27 E7a_E8a KnownJunction 0 6.59 2.50 24.01 16.28 4.33 5.28 4.15 17.70 15.83 20.09 11.21 0.00 0.00 4.89 0.00 6.92 4.77 9.20 17.69 9.52 257.92 198.76 167.23 28 ER8a ExonRegion 0 5.77 5.10 23.19 9.35 7.97 0.96 5.26 20.31 9.05 11.13 11.57 3.74 0.00 9.02 2.29 3.96 1.40 8.50 7.34 5.32 273.06 132.18 119.73 29 E8a_E9a KnownJunction 0 14.22 3.29 26.02 16.85 11.29 0.00 5.87 32.65 4.57 13.11 12.63 12.60 0.00 9.71 0.00 4.02 4.77 3.61 17.88 5.69 278.80 148.00 134.02 30 ER9a ExonRegion 0 9.83 4.52 21.78 9.87 2.57 1.17 3.51 20.30 7.15 7.46 8.23 1.54 0.00 5.92 1.37 1.66 1.17 0.62 7.00 5.35 247.37 117.24 122.49 31 E9_Da NovelBoundary 0 10.89 0.00 15.08 1.96 4.33 2.16 0.00 8.91 1.10 1.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.99 0.00 2.56 13.10 16.90 11.01 32 E9a_E10a KnownJunction 0 3.78 2.89 25.84 13.38 3.82 11.02 0.00 20.82 7.47 7.39 9.21 0.00 0.00 12.07 0.00 0.00 4.77 2.07 0.00 3.00 204.48 97.30 82.29 33 I9 Intron 0 1.39 0.67 6.89 2.00 1.76 0.90 2.82 5.07 1.81 3.08 0.00 0.00 0.00 0.49 0.48 0.49 0.00 0.90 1.57 2.44 23.49 19.13 10.11 34 I9_SR2 SilentIntronRegion 0 1.33 0.42 8.53 2.48 2.17 0.80 3.23 6.28 2.24 3.82 0.00 0.00 0.00 0.60 0.59 0.60 0.00 1.12 1.94 2.59 27.42 22.86 11.37 35 E10_Aa NovelBoundary 0 7.19 0.00 21.38 4.10 4.16 0.00 2.12 1.60 3.01 2.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.19 0.00 2.49 25.51 5.94 0.00 36 ER10a ExonRegion 0 14.01 5.92 32.84 6.85 4.58 2.76 4.98 19.13 8.14 9.13 5.31 0.00 0.00 4.96 4.09 3.29 2.17 2.08 8.00 12.22 262.61 92.47 110.74 37 E10_Da KnownBoundary 0 0.00 2.83 30.93 7.19 0.00 2.61 0.00 15.90 9.52 10.61 7.63 0.00 0.00 2.47 0.00 3.67 4.77 11.11 4.52 0.00 177.49 72.44 67.27 38 E10a_E10b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39 ER10b ExonRegion 0 3.55 2.63 19.84 3.55 5.03 4.51 1.19 10.44 7.64 7.44 6.55 0.00 0.00 2.79 2.94 2.71 1.71 5.04 4.13 8.41 181.05 87.52 87.21 40 E10_Ab KnownBoundary 0 12.82 0.00 11.15 2.93 4.33 0.00 1.68 15.28 3.50 11.15 0.00 0.00 0.00 2.47 5.56 3.93 4.58 2.28 8.28 6.20 209.18 69.68 55.57 41 ER10c ExonRegion 0 5.17 0.15 13.98 5.15 1.93 0.87 1.04 9.14 6.06 4.60 6.53 0.00 0.00 4.24 4.00 3.77 3.36 3.61 3.36 6.58 214.74 174.03 105.20 42 E10_Db KnownBoundary 0 9.48 0.00 8.66 10.16 0.00 0.00 2.12 19.63 4.28 7.36 10.90 0.00 0.00 2.35 0.00 0.00 8.51 7.42 4.52 3.07 267.56 212.05 147.76 43 ER10d ExonRegion 0 5.12 0.65 2.27 1.89 1.94 2.65 0.16 6.42 2.76 2.04 2.51 0.00 0.00 1.05 0.76 0.00 0.56 1.91 2.55 3.41 82.57 50.08 26.62