Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RELA Gene 0 57.14 35.64 112.37 67.82 34.45 80.74 36.95 124.12 89.17 169.56 206.23 92.30 140.38 184.33 170.14 179.36 147.88 128.10 84.80 52.25 200.32 188.43 199.50 2 308639 Transcript 0 0.00 0.00 1.69 0.00 0.00 0.00 0.00 0.00 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.66 0.00 3.26 2.90 0.00 0.00 3 406246 Transcript 0 101.08 55.95 187.05 108.06 58.44 114.77 55.74 265.21 201.89 363.55 490.20 181.40 242.85 350.03 215.97 288.86 295.33 197.57 78.61 82.14 500.73 350.34 246.98 4 IG21_SR3 SilentIntergenicRegion 0 4.47 3.16 3.96 7.29 16.54 2.48 5.37 4.43 4.86 5.31 3.80 8.15 8.05 9.68 3.46 10.26 3.79 4.25 8.75 6.25 0.26 2.02 2.17 5 IG21_AR2 ActiveIntergenicRegion 0 0.00 4.07 2.45 4.87 0.00 0.00 0.00 1.73 1.24 6.88 1.66 0.00 1.34 2.78 11.61 11.04 0.00 7.39 9.56 2.13 0.00 5.95 8.81 6 IG21_AR1 ActiveIntergenicRegion 0 8.08 2.14 8.36 6.34 13.00 11.30 9.19 1.79 5.04 3.55 1.34 0.00 0.00 4.97 4.56 6.19 9.30 15.88 15.49 7.38 7.65 6.38 21.70 7 ER1a ExonRegion 1 49.77 21.50 15.07 11.64 17.86 70.03 26.44 19.68 16.97 49.61 69.78 9.57 14.87 132.85 134.94 206.90 68.02 68.74 146.70 20.16 77.88 105.04 349.76 8 E2a_E3a KnownJunction 0 30.97 9.21 62.95 17.08 11.29 20.33 3.53 48.88 50.38 69.87 76.70 56.12 41.23 51.21 45.61 43.15 56.47 53.64 17.98 2.49 134.67 90.44 43.19 9 ER2a ExonRegion 0 23.60 9.41 40.03 10.25 6.05 11.55 2.50 34.06 35.27 69.79 64.50 47.14 53.85 45.84 43.95 31.81 63.33 61.32 25.25 2.60 98.84 59.57 40.68 10 ER3a ExonRegion 0 46.86 20.79 92.01 50.90 14.26 36.21 15.69 117.72 101.35 184.39 217.21 45.23 73.87 259.55 236.68 351.96 175.29 176.81 216.08 67.27 247.16 214.81 553.48 11 E3a_E4a KnownJunction 0 63.86 61.44 175.13 109.74 11.29 88.70 47.30 186.80 121.79 203.83 212.16 94.23 108.92 182.24 212.99 211.06 151.85 205.65 93.84 68.33 235.19 182.84 238.68 12 ER4a ExonRegion 0 35.74 45.68 146.74 84.54 67.11 174.52 67.66 175.53 132.81 248.14 306.24 112.80 151.62 231.45 208.21 222.87 210.61 191.87 93.81 87.76 339.31 262.41 229.77 13 E4a_E5a KnownJunction 0 47.49 78.47 203.98 144.24 49.15 98.18 51.85 225.87 163.31 352.86 319.45 216.82 208.27 380.13 317.94 487.65 241.51 283.21 172.71 109.04 379.93 396.67 503.30 14 I4_AR1 ActiveIntronRegion 0 6.79 3.86 2.54 4.53 10.48 17.66 6.28 7.90 7.17 10.00 9.93 4.76 1.79 10.74 17.95 18.87 8.32 6.15 7.80 3.12 15.03 13.10 15.41 15 I4_AR2 ActiveIntronRegion 0 13.93 5.58 6.01 3.34 10.27 6.03 5.08 2.83 5.05 5.62 8.48 0.00 2.12 10.64 18.06 8.15 9.05 7.55 6.99 5.83 8.44 14.85 19.32 16 E5_Aa NovelBoundary 0 20.97 15.46 29.12 38.89 15.87 37.59 13.73 33.11 30.12 18.43 14.64 0.00 0.00 15.25 9.77 16.92 35.81 4.23 8.38 12.59 17.42 10.47 19.38 17 ER5a ExonRegion 0 93.22 62.16 240.08 156.60 39.58 104.61 48.96 337.37 198.75 451.96 550.37 156.47 178.43 401.93 420.59 368.61 331.31 273.09 175.40 129.88 511.52 483.24 410.24 18 E5_Da NovelBoundary 0 7.41 2.96 11.59 23.17 8.49 7.78 5.48 8.42 1.71 11.47 12.16 5.85 0.00 2.47 5.93 4.02 8.42 2.16 4.80 3.07 24.90 15.12 16.39 19 E5a_E6a KnownJunction 0 106.91 62.88 201.21 115.00 62.56 124.64 63.95 290.68 215.42 378.67 485.39 177.51 240.41 360.94 222.76 317.35 289.29 194.67 81.41 79.39 519.73 377.93 256.09 20 E5a_E6b KnownJunction 0 0.00 0.00 1.69 0.00 0.00 0.00 0.00 0.00 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.66 0.00 3.26 2.90 0.00 0.00 21 E6_Ab NovelBoundary 0 80.98 24.54 104.31 68.36 27.42 58.32 12.06 119.85 90.36 158.40 207.68 82.08 88.31 110.90 75.04 106.98 158.20 111.05 37.18 38.73 176.93 110.40 84.42 22 ER6a ExonRegion 0 95.24 49.01 172.90 101.13 54.32 104.89 47.53 239.74 188.35 348.43 495.02 185.30 245.29 339.12 209.18 260.36 301.37 200.48 75.81 84.89 481.73 322.74 237.87 23 ER6b ExonRegion 0 141.18 74.38 188.55 130.23 75.29 134.48 65.83 247.03 182.75 355.60 424.40 226.87 336.03 386.37 360.37 345.18 312.96 238.10 145.82 97.17 438.45 405.62 364.91 24 E6a_E7a KnownJunction 0 177.66 95.44 208.04 139.08 97.03 230.15 81.66 303.33 222.51 353.72 447.96 355.77 571.23 458.53 746.28 552.42 318.00 301.32 235.58 128.60 469.94 451.78 570.14 25 E6a_E9a NovelJunction 0 0.00 0.00 7.63 0.00 0.00 0.00 0.00 5.09 4.43 1.34 2.26 0.00 0.00 4.89 0.00 0.00 8.88 0.00 0.00 0.00 0.00 9.12 4.01 26 ER7a ExonRegion 0 97.26 75.47 223.11 120.26 67.00 185.63 91.39 248.98 177.93 315.80 420.12 172.89 320.71 377.17 321.54 267.35 303.78 189.98 101.96 105.13 397.63 368.25 282.92 27 E7_Da NovelBoundary 0 24.52 9.87 20.22 46.98 16.13 10.11 13.87 36.47 27.95 57.22 14.74 18.16 0.00 14.48 32.63 15.30 9.26 32.67 22.21 8.31 22.36 25.60 43.28 28 E7a_E8a KnownJunction 0 88.90 134.32 225.89 107.85 53.57 247.13 124.19 240.90 208.07 303.70 516.76 259.58 492.18 426.40 332.90 359.39 329.50 240.47 117.56 104.06 379.19 403.83 232.96 29 I7 Intron 0 14.36 5.71 22.21 36.11 13.16 31.32 10.84 31.94 29.28 46.38 16.73 4.87 11.04 14.33 12.62 15.30 8.49 22.99 24.59 14.93 19.07 33.63 37.79 30 I7_AR1 ActiveIntronRegion 0 14.49 5.76 22.41 36.44 13.28 31.58 10.94 32.23 29.55 46.81 16.89 4.91 11.14 14.46 12.73 15.44 8.57 23.20 24.82 15.07 19.24 33.94 38.14 31 E8_Aa NovelBoundary 0 9.93 11.12 46.89 40.99 11.63 47.13 18.77 37.01 28.01 67.53 22.37 12.45 13.31 14.36 0.00 4.36 4.58 38.01 17.98 17.19 22.49 29.27 35.08 32 ER8a ExonRegion 0 73.10 80.37 262.49 152.60 86.57 174.65 78.62 262.34 221.50 380.98 468.41 230.60 374.63 418.28 392.34 356.56 341.76 284.66 146.92 123.61 415.43 418.31 355.29 33 E8a_E9a KnownJunction 0 64.23 104.59 338.78 208.50 114.35 208.12 77.24 334.47 241.09 493.75 464.22 203.47 315.89 429.93 424.01 410.06 430.29 271.19 170.45 113.58 450.79 462.62 341.28 34 I8 Intron 0 14.13 5.33 10.50 6.47 7.97 7.06 6.60 15.35 11.15 10.62 15.29 7.17 6.46 13.93 13.74 15.26 10.34 9.49 7.69 5.14 6.79 16.59 14.78 35 I8_SR1 SilentIntronRegion 0 14.56 5.51 10.74 6.69 8.19 7.24 6.83 15.84 11.37 10.93 15.49 7.33 6.59 14.25 14.12 15.55 10.54 9.72 7.91 5.29 6.93 16.83 15.13 36 ER9a ExonRegion 0 129.71 89.98 355.22 236.97 101.25 241.86 107.14 381.45 281.35 541.10 585.45 287.40 465.36 506.65 411.30 542.98 468.97 356.78 244.96 162.04 523.26 569.60 491.11 37 E9a_E10a KnownJunction 0 215.30 103.34 354.13 240.99 107.47 270.13 88.59 388.85 276.99 490.26 500.02 238.13 487.79 562.90 566.66 587.97 453.01 425.64 292.24 159.47 510.16 630.64 688.71 38 ER10a ExonRegion 0 140.06 97.10 321.59 188.93 84.34 205.87 68.79 339.33 235.79 437.95 614.38 282.97 441.49 464.00 392.02 454.70 420.93 391.65 178.64 129.13 494.01 379.73 390.26 39 E10_Da NovelBoundary 0 34.38 3.03 45.56 27.24 16.72 10.51 32.37 21.19 16.17 51.98 12.37 6.60 0.00 4.94 13.97 0.00 18.23 8.83 12.89 15.60 25.58 36.37 20.74 40 E10a_E11a KnownJunction 0 165.88 108.27 311.20 196.91 90.66 225.89 96.94 298.98 214.32 434.38 575.83 358.47 517.99 574.26 454.42 430.83 351.38 320.97 184.66 136.97 497.80 297.04 378.67 41 I10 Intron 0 20.92 7.85 30.28 31.84 25.23 16.04 13.08 18.14 9.83 33.00 13.83 5.55 4.58 10.83 9.73 5.40 6.75 8.24 16.64 5.80 14.52 35.97 34.69 42 I10_AR1 ActiveIntronRegion 0 21.01 7.89 30.42 31.97 25.34 16.11 13.14 18.22 9.87 33.15 13.89 5.58 4.60 10.88 9.77 5.43 6.78 8.28 16.72 5.83 14.59 36.13 34.85 43 E11_Aa NovelBoundary 0 42.90 9.74 41.01 39.86 31.75 23.91 10.95 30.07 13.74 63.66 12.85 6.30 13.64 17.89 13.35 4.36 9.26 3.90 8.47 2.88 10.26 32.33 35.43 44 ER11a ExonRegion 0 37.93 16.77 50.75 30.32 14.54 33.52 18.21 49.79 30.08 59.21 68.23 39.66 56.98 62.70 60.84 59.31 46.46 48.23 28.07 16.68 70.29 69.07 59.74 45 IG20_AR3 ActiveIntergenicRegion 0 5.84 0.00 5.66 1.21 14.58 2.50 0.96 3.46 1.63 2.29 10.81 4.23 0.00 6.51 4.27 4.61 5.11 2.90 2.98 3.76 2.23 1.08 7.33