Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CORO1B Gene 0 52.42 28.68 139.11 64.13 43.68 65.33 51.47 89.19 82.10 162.69 106.36 30.10 22.18 155.32 189.49 102.12 79.99 96.33 83.64 65.68 300.90 141.09 161.09 2 393893 Transcript 0 9.16 2.47 0.64 0.00 0.00 6.42 0.00 2.05 1.23 0.83 11.43 0.00 0.00 7.95 0.00 9.54 3.44 3.27 8.98 4.72 15.28 12.04 19.56 3 341356 Transcript 0 0.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.29 0.00 0.00 7.67 7.41 0.00 0.00 0.00 1.42 0.00 1.47 0.00 0.00 4 453768 Transcript 0 16.34 3.26 10.01 5.21 8.59 5.10 6.81 15.47 11.15 12.36 25.37 9.95 10.37 57.74 43.93 56.55 60.28 16.06 5.70 5.52 4.45 4.95 10.64 5 393886 Transcript 0 0.00 0.00 0.09 0.00 0.00 0.88 0.00 0.00 0.09 0.08 0.00 0.00 0.00 0.48 0.00 0.00 0.00 0.14 1.42 0.00 0.65 0.00 0.00 6 IG27_SR3 SilentIntergenicRegion 0 16.46 0.96 1.94 2.45 9.85 1.24 2.22 4.71 4.66 1.36 6.09 3.82 4.78 9.42 8.33 13.13 11.57 1.51 1.50 1.63 0.32 0.43 0.78 7 IG27_SR2 SilentIntergenicRegion 0 3.53 0.00 1.57 1.59 6.24 0.00 0.00 1.63 0.00 1.85 6.77 0.00 1.04 10.65 3.55 12.71 14.12 0.00 0.00 2.13 0.00 0.00 0.00 8 IG27_SR1 SilentIntergenicRegion 0 13.39 0.00 3.71 3.15 4.66 0.00 2.18 4.67 2.90 2.36 10.95 0.57 10.83 27.54 15.46 29.77 20.42 0.59 4.31 0.96 0.00 0.00 2.16 9 IG27_AR1 ActiveIntergenicRegion 0 0.00 0.00 0.00 0.83 0.00 0.00 0.85 2.96 1.72 1.31 6.07 4.17 10.22 14.56 3.73 9.34 8.37 0.99 0.00 2.13 0.00 0.00 1.99 10 ER1a ExonRegion 0 5.50 1.58 0.00 0.00 0.00 4.77 0.00 1.56 0.80 0.00 5.65 0.00 0.00 6.01 0.00 6.61 2.39 1.52 4.70 3.24 9.37 4.48 12.48 11 E1_Da NovelBoundary 1 14.30 0.00 3.58 2.90 0.00 0.00 0.00 1.93 1.79 1.29 16.95 0.00 0.00 29.90 0.00 0.00 45.25 0.00 0.00 2.56 0.00 0.00 0.00 12 E1a_E2c KnownJunction 0 12.82 3.35 1.27 0.00 0.00 8.06 0.00 2.55 1.65 1.67 17.21 0.00 0.00 9.89 0.00 12.48 4.49 5.02 13.27 6.20 21.19 19.59 26.63 13 ER2a ExonRegion 0 0.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.29 0.00 0.00 7.67 7.41 0.00 0.00 0.00 1.42 0.00 1.47 0.00 0.00 14 E2_Ac KnownBoundary 0 42.30 23.15 10.38 5.13 36.16 26.92 35.51 9.69 4.25 11.04 31.53 0.00 0.00 78.58 40.18 27.00 17.58 13.31 18.45 6.26 43.43 31.05 34.32 15 ER2b ExonRegion 0 17.50 6.78 5.15 2.50 11.86 13.20 14.03 4.55 3.05 6.73 16.62 0.00 0.00 45.64 31.04 10.80 8.69 7.08 13.06 3.19 29.53 14.38 18.31 16 ER2c ExonRegion 1 90.14 56.74 87.16 35.06 80.58 133.42 89.99 47.86 43.37 97.39 67.90 9.65 1.85 72.74 84.66 82.34 38.64 106.84 147.83 53.54 277.74 154.11 334.63 17 E2a_E3a KnownJunction 0 13.63 8.55 138.61 54.74 10.70 20.33 15.24 69.09 63.51 126.60 18.43 5.55 6.82 13.60 13.60 14.78 0.00 123.24 26.45 20.39 44.91 35.58 81.52 18 I2 Intron 0 16.80 0.17 0.45 1.00 11.83 3.60 3.03 3.80 3.77 1.54 19.78 3.79 5.65 60.14 34.40 47.21 46.75 0.45 0.52 1.05 0.18 0.00 0.00 19 I2_SR1 SilentIntronRegion 0 16.69 0.18 0.41 1.00 11.74 3.51 3.13 4.01 3.93 1.63 20.21 4.01 5.65 61.93 35.37 47.81 47.49 0.48 0.40 1.11 0.19 0.00 0.00 20 I2_AR1 ActiveIntronRegion 0 19.18 0.00 1.23 1.03 13.70 5.33 1.40 0.00 0.97 0.00 12.71 0.00 5.83 30.17 18.02 37.83 34.71 0.00 2.70 0.00 0.00 0.00 0.00 21 E3_Aa NovelBoundary 0 67.27 0.00 1.83 4.13 18.59 5.05 22.61 13.88 9.49 2.71 38.06 11.70 0.00 103.89 67.00 101.43 108.46 9.78 0.00 0.00 2.72 4.90 0.00 22 ER3a ExonRegion 0 53.82 11.54 136.82 62.24 36.92 27.62 17.05 80.82 78.22 148.80 95.36 22.44 18.04 136.93 148.86 120.28 83.81 96.45 86.24 68.12 243.09 99.52 191.59 23 E3_Da NovelBoundary 0 36.90 0.00 5.85 6.13 11.54 10.73 4.50 13.68 16.17 3.06 29.27 29.86 13.64 95.24 43.88 78.27 36.75 4.56 0.00 0.00 0.00 0.00 0.00 24 E3a_E4a KnownJunction 0 13.48 22.56 161.14 74.18 79.63 77.74 21.64 86.87 79.19 171.76 92.08 17.26 11.69 129.79 192.35 61.18 49.28 178.00 113.79 81.88 272.87 114.02 186.35 25 I3 Intron 0 44.27 0.00 6.59 9.17 26.57 5.52 10.56 14.72 10.25 3.86 39.55 15.79 34.28 99.95 62.00 97.93 82.93 4.56 1.92 1.92 0.99 0.00 1.33 26 I3_SR1 SilentIntronRegion 0 44.65 0.00 6.65 9.24 26.81 5.57 10.65 14.86 10.34 3.89 39.89 15.93 34.59 100.81 62.52 98.78 83.65 4.60 1.93 1.94 1.00 0.00 1.34 27 E4_Aa NovelBoundary 1 27.56 0.00 4.73 1.50 11.97 7.67 9.76 6.28 14.47 4.06 25.32 0.00 20.13 104.42 36.34 87.93 119.12 0.00 0.00 0.00 0.00 0.00 3.16 28 ER4a ExonRegion 0 31.49 35.58 171.63 69.70 78.23 117.97 83.58 83.46 88.58 184.60 130.12 35.94 25.85 138.96 233.54 94.33 79.30 95.23 70.49 86.44 378.09 145.73 133.56 29 E4_Da NovelBoundary 0 38.38 7.70 3.55 11.55 11.21 29.36 42.66 8.13 5.67 0.00 57.86 19.06 18.51 59.45 118.92 71.35 108.65 4.06 22.59 17.45 98.78 31.11 13.66 30 E4a_E5a KnownJunction 0 63.20 69.46 185.36 88.53 48.30 137.70 83.91 113.16 91.64 196.20 114.45 41.56 20.29 131.03 190.12 59.47 46.28 100.69 81.23 86.29 447.21 204.03 155.96 31 I4 Intron 1 11.53 0.00 1.81 0.00 6.62 1.82 2.62 2.55 0.00 0.85 22.01 0.00 5.74 58.23 39.63 54.45 39.23 0.00 0.00 1.05 0.00 1.03 0.00 32 I4_SR1 SilentIntronRegion 1 12.91 0.00 2.02 0.00 7.30 2.03 2.94 2.82 0.00 0.91 24.41 0.00 6.42 63.69 42.70 60.77 43.34 0.00 0.00 1.18 0.00 1.15 0.00 33 E5_Aa NovelBoundary 0 52.23 0.00 7.48 0.00 4.33 0.00 3.89 11.67 10.65 1.67 31.85 6.00 25.81 67.40 57.23 60.07 53.95 0.00 0.00 3.26 2.97 0.00 0.00 34 ER5a ExonRegion 0 68.87 43.97 197.61 108.74 33.43 56.47 46.65 120.21 106.91 232.80 144.28 26.71 23.67 173.91 283.47 94.83 86.15 117.13 128.03 124.24 444.67 213.34 187.02 35 E5_Da NovelBoundary 1 42.01 0.00 20.64 5.06 8.66 8.46 5.48 17.50 17.04 8.17 30.53 12.75 6.82 64.10 52.41 126.89 32.07 7.17 13.27 6.14 17.85 0.00 4.35 36 E5a_E6a KnownJunction 1 81.05 56.63 198.51 145.64 52.55 69.51 62.27 162.74 158.19 248.15 115.50 31.66 0.00 148.10 283.45 87.67 95.00 146.62 113.04 193.16 535.73 156.57 196.93 37 E6_Aa NovelBoundary 0 20.30 0.00 7.75 1.96 12.05 10.73 7.38 5.30 6.48 5.61 32.38 0.00 0.00 49.74 49.57 56.82 65.83 2.07 0.00 0.00 9.39 6.25 3.50 38 ER6a ExonRegion 0 85.78 45.80 222.57 115.58 52.28 99.45 80.66 130.83 136.15 246.89 140.26 27.71 17.96 202.82 237.28 130.01 109.36 152.45 121.20 115.54 441.82 208.66 230.17 39 E6_Da NovelBoundary 0 6.52 0.00 10.20 5.83 8.49 8.06 6.09 20.29 16.64 2.23 38.85 0.00 6.33 88.29 66.14 55.03 75.46 1.78 0.00 3.26 10.44 8.51 3.67 40 E6a_E7a KnownJunction 0 90.98 76.17 193.55 107.65 61.46 86.43 102.06 112.26 120.25 226.98 113.92 12.60 27.27 150.22 179.49 70.49 50.02 160.30 121.23 74.85 394.02 197.23 248.58 41 I6 Intron 0 9.81 1.18 0.00 0.00 9.30 2.13 2.30 0.00 2.13 3.96 12.32 5.02 0.00 36.87 25.72 25.84 32.52 4.28 0.00 1.23 2.55 0.00 0.00 42 I6_AR1 ActiveIntronRegion 0 10.04 1.21 0.00 0.00 9.52 2.17 2.36 0.00 2.18 4.05 12.61 5.13 0.00 37.69 26.31 26.44 33.28 4.38 0.00 1.26 2.61 0.00 0.00 43 E7_Aa NovelBoundary 0 3.56 0.00 13.81 3.13 4.16 15.73 10.07 22.71 18.11 8.03 26.59 7.65 12.50 59.16 38.20 45.97 67.13 3.94 0.00 2.88 5.00 2.63 0.00 44 ER7a ExonRegion 0 56.46 55.70 217.03 99.85 60.34 92.35 91.45 122.75 108.95 233.63 129.84 28.39 14.07 200.13 227.60 153.88 94.08 133.30 113.98 73.44 434.85 220.49 231.21 45 E7_Da KnownBoundary 0 42.30 5.39 22.74 9.62 16.30 5.79 16.16 29.57 8.42 27.86 19.27 5.85 0.00 73.52 51.42 57.08 100.51 21.51 0.00 7.80 5.31 2.27 8.71 46 E7a_E9a KnownJunction 0 55.49 40.52 262.59 106.35 71.05 127.99 86.34 144.05 98.06 248.63 106.03 64.97 13.15 164.11 130.29 60.67 51.61 114.62 90.92 47.49 415.89 215.30 194.29 47 ER7b ExonRegion 0 16.34 3.26 10.01 5.21 8.59 5.10 6.81 15.47 11.15 12.36 25.37 9.95 10.37 57.74 43.93 56.55 60.28 16.06 5.70 5.52 4.45 4.95 10.64 48 E7_Db NovelBoundary 0 32.15 6.25 12.98 5.59 30.81 16.13 14.79 45.26 11.69 24.66 30.43 24.61 6.01 82.82 50.56 84.42 93.78 18.28 16.85 10.99 32.43 5.39 0.00 49 I7 Intron 0 18.94 1.69 7.98 4.65 18.10 6.87 8.82 13.94 11.69 9.96 32.79 13.52 14.13 75.64 52.84 59.10 58.41 5.75 6.63 4.21 11.46 6.72 13.45 50 I7_AR1 ActiveIntronRegion 0 19.01 1.70 8.01 4.67 18.18 6.90 8.86 14.00 11.73 10.00 32.93 13.57 14.19 75.94 53.06 59.33 58.64 5.77 6.66 4.22 11.51 6.75 13.50 51 ER8a ExonRegion 0 0.00 0.00 0.09 0.00 0.00 0.88 0.00 0.00 0.09 0.08 0.00 0.00 0.00 0.48 0.00 0.00 0.00 0.14 1.42 0.00 0.65 0.00 0.00 52 E9_Aa NovelBoundary 0 42.30 5.85 21.17 8.16 36.42 26.41 10.38 35.08 25.58 22.48 57.12 11.85 27.43 113.78 61.69 106.55 88.45 14.76 0.00 8.69 27.43 8.08 7.77 53 ER9a ExonRegion 0 57.95 37.48 239.75 97.80 78.39 125.50 95.85 123.26 130.50 255.39 159.45 59.71 19.83 237.99 230.44 134.62 82.40 148.88 133.85 75.78 466.49 232.90 277.30 54 E9_Da NovelBoundary 1 52.45 0.00 7.33 8.29 10.78 9.99 11.00 21.44 19.10 5.88 39.96 11.10 52.59 112.25 40.79 80.75 98.18 7.59 4.80 6.26 14.95 0.00 8.19 55 E9a_E10a KnownJunction 0 95.57 75.51 253.13 126.76 96.77 156.90 118.05 121.41 129.60 281.51 123.77 65.57 19.64 149.27 220.29 101.26 53.58 182.06 121.42 123.62 516.77 192.15 257.20 56 I9 Intron 0 10.64 0.00 0.00 0.00 7.69 2.63 0.95 0.00 0.00 0.00 5.55 7.74 11.10 53.73 36.78 19.21 26.08 0.00 0.00 0.00 1.58 0.00 0.00 57 I9_AR1 ActiveIntronRegion 0 10.89 0.00 0.00 0.00 7.87 2.71 0.98 0.00 0.00 0.00 5.69 7.97 11.35 55.20 37.84 19.77 26.74 0.00 0.00 0.00 1.63 0.00 0.00 58 E10_Aa NovelBoundary 0 20.23 2.96 16.82 13.85 16.55 7.78 12.14 14.54 6.05 3.20 49.91 13.20 27.11 107.95 86.66 103.48 62.27 18.20 4.24 16.30 11.31 3.12 24.84 59 ER10a ExonRegion 0 97.61 61.79 230.77 108.53 83.57 127.47 90.38 133.75 128.00 249.60 165.42 63.31 63.38 215.59 261.27 139.93 95.97 149.58 111.27 92.61 536.14 237.25 244.30 60 E10_Da NovelBoundary 0 46.30 0.00 14.28 8.66 15.96 8.12 6.49 21.36 15.36 8.68 45.64 24.31 34.09 137.85 100.25 101.51 88.27 6.67 4.52 5.69 2.53 6.25 11.18 61 E10a_E11a KnownJunction 1 87.87 60.78 210.02 132.82 104.24 91.59 78.08 132.34 121.79 254.36 87.92 43.21 21.26 128.08 170.47 113.90 21.41 175.89 113.13 94.02 450.36 180.09 295.19 62 I10 Intron 0 25.16 0.78 7.00 2.73 6.16 4.22 5.08 6.91 4.23 3.93 35.58 8.50 24.81 76.57 50.36 55.27 58.22 3.17 3.66 2.86 2.54 2.40 1.69 63 I10_AR1 ActiveIntronRegion 0 28.96 0.90 8.05 3.14 7.09 4.86 5.85 7.96 4.88 4.53 40.97 9.78 28.55 87.29 55.66 63.65 67.05 3.65 4.22 3.29 2.92 2.76 1.95 64 E11_Aa NovelBoundary 1 117.80 0.00 22.09 6.56 25.21 17.09 20.31 35.53 9.37 9.43 38.43 30.46 54.87 160.16 52.78 133.55 67.51 4.56 4.80 2.81 3.03 10.47 16.22 65 ER11a ExonRegion 0 80.87 56.66 209.45 106.33 60.85 108.32 92.08 137.11 124.19 255.50 139.60 67.48 47.30 189.13 249.41 142.20 75.41 204.02 130.05 103.89 468.14 200.70 281.61 66 E11_Da NovelBoundary 0 42.60 0.00 4.55 3.76 18.93 0.00 26.19 21.11 6.54 11.12 63.75 28.51 87.82 110.48 82.58 83.74 125.57 9.00 8.75 0.00 11.86 5.63 4.10 67 E11a_E12a KnownJunction 0 217.59 89.13 211.67 105.25 40.24 109.77 138.98 140.88 123.81 266.04 179.36 65.42 49.02 178.00 264.42 198.41 92.10 218.83 169.23 142.02 495.21 336.36 498.86 68 I11 Intron 0 59.39 2.85 18.16 7.93 22.86 7.27 10.74 24.98 15.94 14.18 67.10 28.70 50.66 141.59 88.37 110.24 114.18 12.22 8.36 4.02 11.28 7.24 6.99 69 I11_AR1 ActiveIntronRegion 0 60.53 2.83 19.64 8.32 23.99 7.73 11.17 26.17 16.93 14.78 70.87 30.27 54.37 148.52 94.30 115.61 119.55 12.75 9.16 3.91 11.76 7.38 7.11 70 I11_SR1 SilentIntronRegion 1 49.47 3.25 2.80 3.99 11.51 2.57 6.54 13.06 5.84 8.29 28.77 12.74 12.40 71.88 27.40 56.43 60.31 6.89 0.00 5.44 6.64 6.10 5.96 71 E12_Aa NovelBoundary 0 72.31 0.00 21.38 6.79 7.56 10.05 12.06 32.90 14.26 18.86 36.32 18.31 13.64 123.43 103.96 89.55 91.72 9.12 14.02 0.00 11.24 11.14 0.00 72 ER12a ExonRegion 0 53.81 25.69 114.21 44.81 33.80 60.08 51.40 75.64 74.07 143.17 101.56 33.98 22.95 162.76 213.47 108.38 80.31 92.66 74.54 54.01 293.41 131.91 151.85 73 E12a_E13a KnownJunction 0 25.56 16.97 142.46 44.98 30.81 59.00 38.38 66.25 72.40 139.74 57.33 5.85 6.82 65.98 158.72 42.47 43.48 66.95 46.40 59.51 346.14 110.04 103.63 74 I12 Intron 0 19.80 0.00 3.31 1.84 2.42 1.11 1.20 3.89 8.33 1.55 21.00 1.31 5.91 63.63 33.53 48.43 39.85 1.66 0.96 1.93 0.67 1.89 3.54 75 I12_AR1 ActiveIntronRegion 0 11.70 0.00 2.55 1.08 2.46 0.00 0.94 2.46 5.33 0.09 14.65 0.00 0.00 32.74 27.18 19.87 13.55 2.58 0.00 0.95 0.00 3.73 1.39 76 I12_SR1 SilentIntronRegion 1 22.49 0.00 3.58 2.09 2.45 1.45 1.29 4.37 9.34 2.00 23.19 1.71 7.74 73.68 35.89 57.60 48.21 1.42 1.26 2.24 0.87 1.37 4.23 77 E13_Aa NovelBoundary 0 13.85 0.00 9.61 0.00 0.00 0.00 1.99 13.18 5.64 3.33 32.27 0.00 0.00 61.69 5.56 40.84 43.20 2.49 3.86 6.01 0.00 0.00 4.18 78 ER13a ExonRegion 0 33.64 10.97 88.38 39.82 29.59 34.66 27.47 86.24 63.38 128.44 92.42 25.07 21.38 155.45 180.93 83.34 85.86 60.09 60.12 44.31 192.97 102.37 90.87