Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ATPGD1 Gene 0 12.76 1.22 3.04 3.41 3.70 2.79 2.15 8.84 7.24 5.08 0.52 1.22 1.22 7.31 3.12 3.84 3.68 2.40 1.39 3.13 4.51 5.63 11.77 2 307823 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 445895 Transcript 0 0.00 2.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.63 0.00 4 423745 Transcript 0 4.34 0.00 0.00 1.36 2.48 6.69 2.88 1.94 4.57 0.75 0.00 0.00 0.00 1.06 0.00 2.23 0.33 2.82 0.00 2.82 1.98 0.83 3.82 5 ER1a ExonRegion 0 0.00 0.00 0.00 0.05 0.00 0.00 0.00 1.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.68 1.87 0.00 0.00 0.00 0.00 0.00 3.33 6 E1a_E2b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 E2_Aa NovelBoundary 0 17.41 0.00 1.83 2.46 4.24 0.00 3.93 12.49 20.23 12.73 0.00 0.00 0.00 2.30 4.45 7.69 13.00 6.84 0.00 2.56 5.37 5.57 15.88 8 ER2a ExonRegion 0 4.34 0.00 0.00 1.36 2.48 6.69 2.88 1.94 4.57 0.75 0.00 0.00 0.00 1.06 0.00 2.23 0.33 2.82 0.00 2.82 1.98 0.83 3.82 9 E2_Ab KnownBoundary 0 14.00 0.00 0.00 2.06 7.98 12.78 7.99 11.13 16.70 6.66 0.00 0.00 0.00 3.00 0.00 4.36 3.93 14.96 0.00 9.14 5.44 5.14 11.87 10 ER2b ExonRegion 0 5.59 1.15 0.34 2.45 2.67 5.59 3.07 6.91 10.39 4.40 0.37 0.00 0.00 4.92 2.31 4.05 3.07 6.02 1.20 5.21 5.54 5.32 9.92 11 E2_Da NovelBoundary 0 6.45 3.35 1.83 2.06 0.00 0.00 7.15 3.98 15.94 1.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.27 4.14 6.07 5.93 0.00 15.79 12 E2a_E3a KnownJunction 0 3.56 0.00 0.00 1.86 0.00 0.00 0.00 1.77 2.95 0.00 0.00 0.00 0.00 2.30 0.00 8.29 0.00 0.00 0.00 0.00 0.00 2.45 8.28 13 E3_Aa NovelBoundary 0 7.33 0.00 3.10 4.86 0.00 2.90 2.03 17.46 5.09 5.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.39 8.28 3.26 3.15 5.57 8.11 14 ER3a ExonRegion 0 4.04 0.00 2.07 0.06 0.00 0.98 2.25 3.11 2.42 0.04 1.20 0.00 0.00 3.36 0.03 3.70 1.83 3.06 1.81 4.82 7.44 2.59 13.02 15 E3_Da NovelBoundary 0 0.00 0.00 6.59 9.06 4.33 2.78 0.00 23.12 28.85 5.45 2.32 0.00 0.00 4.65 0.00 14.53 8.88 9.20 8.94 5.31 9.39 3.12 12.80 16 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.19 0.00 0.00 0.00 0.00 7.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.84 17 E4_Aa NovelBoundary 0 6.08 0.00 2.75 0.00 0.00 0.00 1.81 15.40 19.18 9.70 0.00 0.00 0.00 2.47 5.19 0.00 3.65 16.00 8.56 9.01 8.22 2.63 12.21 18 ER4a ExonRegion 0 6.64 1.06 2.73 2.76 2.52 1.95 3.40 10.66 9.92 7.32 0.59 0.00 0.81 4.51 4.23 2.48 3.80 3.74 3.66 3.51 7.83 3.92 10.68 19 E4_Da NovelBoundary 0 3.33 0.00 8.84 5.26 4.33 10.45 4.11 27.56 41.35 8.43 0.00 0.00 0.00 2.35 0.00 8.63 8.51 19.19 7.81 33.11 11.37 2.45 25.18 20 E4a_E5a KnownJunction 0 0.00 0.00 1.71 0.00 0.00 0.00 2.25 2.55 1.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.67 21 E5_Aa NovelBoundary 0 3.48 2.96 3.02 8.26 0.00 4.88 2.25 25.34 18.26 18.70 0.00 0.00 6.17 2.24 0.00 0.00 17.95 9.08 3.48 9.40 5.81 8.76 15.11 22 ER5a ExonRegion 0 4.10 0.59 0.89 1.21 1.56 1.02 4.51 7.44 6.63 5.94 0.00 0.00 3.38 2.14 1.19 0.00 3.85 3.48 0.00 5.16 6.42 3.36 11.56 23 E5_Da NovelBoundary 0 9.41 0.00 4.41 4.93 0.00 0.00 0.00 11.17 25.55 9.43 0.00 0.00 0.00 2.47 0.00 0.00 12.53 11.69 0.00 0.00 2.72 5.82 7.17 24 E5a_E6a KnownJunction 0 3.33 0.00 0.00 0.00 0.00 0.00 4.33 6.24 4.46 2.47 0.00 0.00 0.00 4.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.12 19.89 25 E6_Aa NovelBoundary 0 7.48 2.76 2.57 4.76 0.00 0.00 7.33 32.08 19.01 20.31 2.68 0.00 0.00 6.71 4.45 4.36 14.31 12.73 7.81 6.07 5.99 11.45 23.47 26 ER6a ExonRegion 0 0.44 2.29 0.06 1.16 4.23 5.03 4.50 6.85 10.04 3.45 0.00 2.11 2.18 6.59 3.85 0.00 4.18 2.73 1.89 4.90 0.95 4.29 10.41 27 E6_Da NovelBoundary 0 0.00 0.00 7.10 3.76 0.00 5.22 2.25 7.68 28.15 13.24 0.00 0.00 6.49 0.00 4.45 3.59 0.00 2.57 3.67 5.88 15.88 2.27 27.49 28 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 4.07 2.84 0.00 3.41 4.60 1.45 0.00 0.00 0.00 5.47 0.00 0.00 3.55 0.00 0.00 0.00 3.15 0.00 0.00 29 ER7a ExonRegion 0 3.04 1.15 1.23 1.05 0.66 0.50 0.98 10.92 8.40 7.03 0.00 4.77 0.14 4.50 0.29 2.20 5.69 0.00 2.35 3.52 14.34 2.78 8.68 30 E7_Da KnownBoundary 0 3.33 3.16 0.00 3.73 0.00 0.00 0.00 14.95 16.52 10.31 0.00 12.15 0.00 2.47 4.70 0.00 4.77 2.57 0.00 5.18 13.59 2.88 18.78 31 E7a_E7b KnownJunction 0 0.00 2.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.63 0.00 32 ER7b ExonRegion 0 0.08 0.44 0.05 1.71 1.73 0.00 0.00 11.51 8.76 5.69 1.25 6.63 2.49 1.25 7.34 1.96 1.80 1.68 2.06 3.58 6.78 2.95 10.74 33 E7_Ab KnownBoundary 0 0.00 0.00 1.80 0.00 0.00 0.00 0.00 3.94 4.46 4.43 0.00 12.00 0.00 0.00 4.45 0.00 4.30 2.20 0.00 2.56 2.72 0.00 4.18 34 ER7c ExonRegion 0 0.00 0.00 0.45 0.00 0.00 0.00 0.00 6.05 2.76 3.88 0.00 10.26 2.35 2.30 2.11 1.91 1.38 2.86 0.00 0.28 3.62 0.00 3.04 35 E7b_E8a KnownJunction 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 6.45 2.84 1.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.36 0.00 0.00 0.00 0.00 4.10 36 ER8a ExonRegion 0 0.77 0.00 0.47 0.00 0.00 0.67 0.24 2.45 4.57 1.00 0.00 0.65 0.00 2.50 2.59 1.04 3.59 1.01 0.58 1.14 1.59 1.22 2.88 37 E8a_E9a KnownJunction 0 0.00 0.00 1.30 0.00 0.00 0.00 0.00 2.09 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.76 12.12 38 I8_AR3 ActiveIntronRegion 0 15.79 2.04 1.63 1.81 4.77 3.06 1.47 5.73 3.07 2.47 0.43 2.78 1.29 5.03 2.93 1.99 3.31 1.23 0.00 1.18 1.47 3.94 5.56 39 E9_Aa NovelBoundary 0 17.63 0.00 2.25 2.03 3.99 0.00 2.25 2.05 4.95 6.15 0.00 0.00 6.66 11.48 16.07 0.00 0.00 4.27 3.86 2.56 3.15 0.00 8.71 40 ER9a ExonRegion 0 19.89 1.63 4.52 4.92 5.32 3.35 2.00 10.26 7.15 5.63 0.66 1.25 1.46 10.31 3.45 5.23 4.00 1.89 1.17 2.97 3.78 7.66 14.31