Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C11orf84 Gene 0 21.05 46.76 158.39 81.35 39.32 74.73 62.86 163.26 124.89 319.20 186.68 34.79 31.83 183.85 182.84 121.11 147.31 157.27 174.32 95.06 102.91 75.85 70.09 2 294244 Transcript 0 30.03 73.32 229.26 94.01 54.69 121.22 98.91 240.67 161.40 455.62 251.52 44.77 44.79 240.74 238.12 160.22 214.64 209.55 232.79 125.35 138.54 99.64 95.73 3 IG40_SR1 SilentIntergenicRegion 0 0.00 0.00 1.18 0.39 0.25 13.63 0.25 1.22 1.18 2.16 0.55 0.00 0.00 0.00 0.61 0.00 0.00 2.77 2.11 1.82 11.07 2.37 1.95 4 IG40_AR3 ActiveIntergenicRegion 0 3.85 5.98 13.33 7.48 5.12 6.67 7.94 7.91 3.37 9.92 0.23 1.68 0.00 1.42 0.96 1.66 5.43 14.44 10.14 9.54 3.16 1.18 3.82 5 ER1a ExonRegion 0 2.32 6.41 45.17 15.63 2.99 11.97 10.18 42.26 35.77 93.44 60.87 8.04 7.74 46.75 66.21 19.88 40.11 27.95 37.33 33.06 35.03 17.41 9.35 6 E1a_E2a KnownJunction 0 10.74 36.77 222.49 86.70 12.65 83.93 61.65 237.98 157.43 456.89 219.37 38.71 47.72 199.42 231.91 98.35 165.78 136.17 194.08 147.07 99.96 59.46 78.88 7 ER2a ExonRegion 0 21.94 55.41 278.24 110.93 36.63 92.76 79.58 257.98 223.10 553.20 288.12 60.89 65.15 249.60 298.01 176.80 199.63 301.29 182.67 166.52 144.94 113.27 83.15 8 E2a_E3a KnownJunction 0 35.78 106.63 331.42 105.81 92.61 248.78 163.05 348.88 251.13 620.62 350.51 85.08 94.31 280.54 501.76 239.25 305.66 420.92 300.06 204.02 132.27 112.42 82.20 9 ER3a ExonRegion 0 15.73 67.09 304.52 113.10 52.91 142.32 100.66 286.98 208.93 547.75 291.15 49.41 57.56 376.35 335.04 243.32 235.38 343.44 318.83 154.84 137.35 137.40 146.42 10 E3a_E4a KnownJunction 1 20.82 42.43 270.69 100.95 38.54 51.96 82.63 284.64 180.18 600.02 350.46 43.36 20.29 216.67 176.40 165.34 274.43 199.56 209.04 137.17 209.86 131.65 130.61 11 E3a_E5a NovelJunction 0 0.00 12.56 15.82 7.16 3.82 0.00 16.87 47.28 27.89 29.17 4.84 5.70 0.00 28.67 34.98 3.59 17.30 21.31 8.85 12.91 5.00 11.14 7.77 12 E4_Aa NovelBoundary 0 7.26 3.03 9.20 1.56 8.15 12.95 12.90 16.35 7.93 18.75 17.27 0.00 5.68 14.42 4.45 44.43 22.35 8.62 34.26 6.01 11.37 2.76 12.21 13 ER4a ExonRegion 0 49.18 103.84 309.16 123.87 78.98 148.60 138.44 326.61 193.45 615.95 337.49 62.95 60.26 289.70 232.22 218.66 303.63 196.35 335.17 125.35 194.98 134.39 140.42 14 E4a_E5a KnownJunction 0 93.50 232.00 330.44 126.52 153.91 311.53 235.65 355.87 210.94 656.56 367.72 67.07 66.07 412.80 320.66 288.73 322.11 325.45 419.78 165.93 238.21 170.72 192.92 15 ER5a ExonRegion 0 28.24 77.70 192.30 95.82 75.40 126.59 106.31 195.93 121.31 360.60 207.84 41.57 43.42 241.88 187.77 140.93 208.58 139.89 254.86 91.69 131.96 100.71 97.61 16 E5a_E6a KnownJunction 1 26.38 34.27 131.01 66.53 14.94 52.36 56.35 180.77 88.19 268.78 131.56 6.30 12.34 173.41 110.88 63.15 180.74 85.73 137.98 70.50 106.50 54.80 27.06 17 I5 Intron 0 16.30 21.52 32.38 27.56 22.41 29.32 23.34 36.24 28.82 40.69 29.73 17.84 14.03 42.34 31.08 43.10 29.63 29.69 25.30 29.32 9.89 12.99 17.59 18 I5_SR1 SilentIntronRegion 0 18.00 9.55 24.80 16.09 20.26 21.62 13.14 27.23 23.11 26.98 21.75 14.72 14.62 28.76 21.97 34.63 22.64 14.48 24.41 19.51 7.05 7.49 15.87 19 I5_AR1 ActiveIntronRegion 1 15.56 35.03 57.04 34.75 13.65 48.64 30.32 40.40 39.68 60.70 43.20 31.82 41.04 80.23 43.66 56.17 47.86 58.07 33.05 28.35 13.99 11.72 16.59 20 I5_AR2 ActiveIntronRegion 1 12.30 33.41 52.40 34.01 25.10 49.69 40.29 50.87 29.41 71.87 54.40 25.36 36.85 102.55 35.92 53.07 52.81 68.01 30.94 39.31 20.04 13.69 22.65 21 I5_AR3 ActiveIntronRegion 0 14.62 27.19 47.02 41.11 38.64 42.95 31.59 55.03 29.99 76.82 66.17 41.68 29.34 79.43 42.64 60.27 69.09 78.68 37.26 34.14 27.26 16.18 30.05 22 I5_AR4 ActiveIntronRegion 1 16.18 27.02 51.03 57.24 30.20 20.04 40.00 63.71 47.64 79.96 99.41 43.60 24.12 88.98 35.23 73.88 74.03 76.81 38.45 38.15 24.08 13.69 43.00 23 I5_AR5 ActiveIntronRegion 1 13.76 30.50 47.79 60.99 18.40 15.36 37.90 68.27 51.87 82.29 86.50 37.34 17.00 89.73 43.52 66.50 58.18 72.52 28.67 48.14 24.24 10.94 28.27 24 I5_AR6 ActiveIntronRegion 1 13.00 37.19 49.89 65.81 19.49 21.74 46.72 71.36 57.34 84.54 83.94 23.50 9.38 77.73 41.45 63.26 41.97 73.65 42.32 52.28 20.46 10.42 33.56 25 I5_SR2 SilentIntronRegion 1 12.17 31.83 49.75 66.44 24.75 35.58 43.23 74.06 58.11 86.71 76.25 44.38 11.96 88.51 48.31 50.97 49.68 78.53 44.75 59.15 22.26 9.48 37.30 26 I5_AR7 ActiveIntronRegion 1 15.51 28.82 37.82 50.03 27.50 53.43 37.66 63.03 39.99 70.89 72.55 45.83 12.53 87.95 51.57 77.17 65.51 94.04 44.54 58.91 20.63 18.75 31.70 27 I5_SR3 SilentIntronRegion 0 16.34 34.63 30.76 27.72 27.83 42.27 40.87 43.46 35.37 61.47 40.80 25.73 12.23 62.84 41.13 58.82 32.39 54.66 21.57 45.92 12.55 14.74 20.05 28 I5_AR8 ActiveIntronRegion 0 11.91 25.51 22.62 17.27 25.76 25.53 28.80 29.69 29.19 41.33 22.30 19.16 9.22 50.71 36.34 38.26 36.70 23.23 29.17 31.48 9.64 13.19 18.77 29 I5_AR9 ActiveIntronRegion 0 18.43 26.82 43.55 40.70 22.33 33.91 24.28 43.66 31.86 43.05 31.07 14.55 14.98 38.81 33.84 47.46 27.72 31.23 24.61 31.79 10.10 18.24 16.79 30 E6_Aa NovelBoundary 0 14.97 29.14 32.17 22.04 0.00 9.09 12.59 29.82 33.33 32.77 21.64 0.00 0.00 43.09 16.32 7.95 18.89 13.51 17.32 17.64 22.73 0.00 7.60 31 ER6a ExonRegion 0 25.69 43.94 106.46 88.28 42.09 62.65 53.56 129.47 104.99 238.02 161.67 29.03 17.86 161.03 158.41 108.00 124.95 128.31 170.95 82.73 92.85 63.81 64.40 32 IG41_SR1 SilentIntergenicRegion 0 2.38 8.96 8.01 10.08 12.92 20.05 5.42 30.36 39.72 41.67 1.65 0.62 0.55 3.58 2.33 9.71 3.75 9.26 12.68 5.14 3.13 1.48 1.25 33 IG41_AR2 ActiveIntergenicRegion 0 2.16 13.09 14.38 21.80 30.36 43.11 10.01 52.13 51.54 46.64 3.16 1.54 3.24 2.38 3.84 8.81 2.70 14.74 23.77 12.39 5.41 2.34 4.50 34 IG41_AR8 ActiveIntergenicRegion 0 9.57 0.00 0.05 1.56 7.14 1.01 1.38 2.52 6.15 2.10 3.08 2.74 5.91 16.44 6.49 12.40 6.79 0.43 0.84 1.95 1.69 0.00 1.15 35 IG41_AR9 ActiveIntergenicRegion 0 21.52 0.00 0.00 0.15 4.76 1.83 2.50 1.34 0.00 2.93 1.72 0.00 3.13 9.56 8.38 14.20 6.60 3.70 0.00 2.13 2.33 0.00 1.14 36 IG41_AR10 ActiveIntergenicRegion 0 23.63 0.00 0.00 0.00 4.91 1.83 0.00 1.73 0.00 4.21 1.93 0.00 0.00 7.04 9.67 14.86 8.25 3.70 0.00 2.13 6.61 0.00 2.94 37 IG41_AR11 ActiveIntergenicRegion 0 26.10 0.00 0.00 0.00 5.35 1.83 0.00 2.30 1.65 4.59 1.93 0.00 0.00 6.50 14.02 18.33 6.60 3.70 0.00 1.77 6.61 0.00 2.94 38 IG41_AR12 ActiveIntergenicRegion 0 27.51 0.00 0.00 0.00 5.35 1.17 0.00 4.24 2.47 4.80 1.93 0.00 0.00 6.20 14.24 22.43 6.60 2.52 0.00 0.00 6.61 1.89 2.94 39 IG41_SR4 SilentIntergenicRegion 0 6.60 0.35 0.69 0.79 3.43 0.32 0.70 2.18 1.52 2.36 3.08 1.39 3.02 6.81 6.24 13.20 4.76 0.94 0.02 1.18 1.93 0.84 0.55 40 IG41_AR13 ActiveIntergenicRegion 0 1.81 0.57 0.60 0.29 0.80 5.94 2.38 2.42 1.44 4.84 13.69 2.22 2.01 11.11 8.62 10.94 15.47 6.03 8.45 1.56 5.58 3.96 4.57