Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SLC25A45 Gene 0 63.57 12.85 22.33 31.36 29.61 23.45 14.00 39.89 61.85 26.28 40.49 20.53 48.96 101.87 169.75 99.67 94.21 52.82 19.62 29.44 20.65 13.20 16.25 2 332723 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 294187 Transcript 0 0.00 0.00 0.00 2.06 3.90 0.00 2.16 2.51 4.86 0.00 5.37 0.00 0.00 4.83 15.20 0.00 17.20 0.00 0.00 0.00 0.00 2.57 0.00 4 398802 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 417511 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 360662 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 377152 Transcript 0 0.00 3.35 7.54 0.00 3.74 11.92 0.00 0.00 2.95 1.40 2.21 5.55 0.00 7.36 13.35 19.23 18.61 4.19 0.00 0.00 8.40 2.94 14.60 8 ER1a ExonRegion 0 49.97 10.65 2.42 14.60 53.66 32.19 19.04 25.37 32.60 14.08 39.21 5.31 9.00 43.34 70.35 95.44 44.67 49.55 20.47 16.14 5.78 2.16 2.43 9 E1_Da NovelBoundary 0 3.26 0.00 1.83 8.66 4.16 2.56 2.21 20.25 26.56 18.70 14.90 0.00 0.00 21.13 19.16 10.94 35.90 11.03 7.53 29.15 6.24 0.00 0.00 10 E1a_E2a KnownJunction 0 0.00 0.00 1.18 3.56 3.14 0.00 0.00 12.77 13.63 8.03 20.16 0.00 6.82 14.13 19.04 15.72 22.63 4.73 8.94 9.20 2.90 0.00 3.67 11 E1a_E3a KnownJunction 0 0.00 0.00 0.00 2.06 3.90 0.00 2.16 2.51 4.86 0.00 5.37 0.00 0.00 4.83 15.20 0.00 17.20 0.00 0.00 0.00 0.00 2.57 0.00 12 I1 Intron 0 17.99 5.23 13.18 11.64 8.99 11.24 6.54 14.26 22.56 10.14 12.04 5.74 9.90 29.62 50.72 36.14 26.10 20.97 7.87 9.46 10.01 9.27 9.00 13 I1_AR1 ActiveIntronRegion 0 18.06 5.25 13.23 11.69 9.03 11.28 6.57 14.31 22.64 10.17 12.09 5.76 9.94 29.73 50.92 36.26 26.18 21.05 7.90 9.50 10.05 9.30 9.03 14 E2_Aa NovelBoundary 0 107.13 39.47 31.05 34.73 24.96 29.41 8.04 25.75 64.41 34.38 22.11 12.60 40.42 90.18 159.84 119.20 116.41 59.44 8.00 48.90 14.33 21.98 51.22 15 ER2a ExonRegion 0 4.77 7.39 3.81 4.96 3.45 11.67 1.35 7.39 14.80 5.59 20.28 7.64 11.17 70.75 85.77 35.50 63.86 2.59 18.36 13.35 13.58 1.52 6.62 16 E2_Da NovelBoundary 0 39.71 3.35 15.61 28.17 10.87 7.50 5.87 19.10 30.76 26.43 24.43 6.30 26.30 65.04 48.95 105.96 70.22 16.79 0.00 13.10 5.68 7.65 4.35 17 E2a_E3a KnownJunction 0 11.34 0.00 9.22 7.69 3.65 14.14 1.81 11.67 14.99 7.33 2.00 6.00 13.64 17.07 33.25 30.85 48.62 0.00 9.41 18.15 16.99 5.57 18.27 18 I2 Intron 1 21.69 2.32 8.14 10.79 13.84 12.53 6.41 16.86 22.62 14.43 19.72 5.53 16.78 40.87 53.16 41.17 33.51 30.50 6.20 11.20 5.22 2.87 5.99 19 I2_AR1 ActiveIntronRegion 1 6.62 0.00 3.71 3.32 3.84 6.54 3.02 4.92 8.27 4.79 16.90 1.33 21.29 24.61 36.90 9.37 15.15 6.63 0.57 1.04 1.13 2.08 0.83 20 I2_SR1 SilentIntronRegion 0 15.69 0.00 3.12 3.90 39.07 22.13 9.47 8.17 8.44 4.57 15.25 6.41 33.54 23.23 39.98 30.29 28.80 11.85 4.15 8.36 2.48 4.68 1.61 21 I2_AR3 ActiveIntronRegion 1 29.06 3.60 10.82 12.70 13.10 14.51 7.09 21.09 31.08 19.06 24.46 8.09 20.17 57.79 70.21 56.38 46.63 42.10 7.45 12.81 6.31 3.16 9.36 22 I2_SR2 SilentIntronRegion 1 12.22 0.89 5.17 9.84 11.09 7.94 5.03 12.88 12.89 9.74 13.02 1.53 7.23 17.85 29.09 21.38 14.47 17.46 5.15 10.24 4.42 2.10 1.79 23 E3_Aa NovelBoundary 0 16.30 0.00 9.61 8.92 4.33 10.16 7.86 13.80 43.95 22.51 15.21 0.00 26.62 29.55 73.92 24.27 29.45 21.56 8.47 20.52 6.05 6.06 0.00 24 ER3a ExonRegion 0 29.78 4.34 14.62 26.17 13.38 22.01 8.61 27.03 43.26 13.29 33.30 15.15 46.26 62.45 106.03 115.03 94.23 39.26 21.07 26.16 29.25 8.05 19.82 25 E3a_E4a KnownJunction 0 72.16 8.81 24.30 54.84 20.54 49.46 19.34 42.18 88.22 26.62 54.17 24.46 61.20 116.84 168.98 179.18 132.12 92.57 36.24 44.04 36.08 11.76 18.35 26 E3a_E5a KnownJunction 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 ER4a ExonRegion 0 32.92 6.13 28.12 39.85 24.86 38.10 10.39 34.95 82.10 25.23 52.83 13.05 46.70 93.82 158.92 143.74 123.37 59.62 35.04 38.39 29.11 9.58 19.90 28 E4_Da NovelBoundary 0 9.26 3.35 5.50 18.85 18.85 0.00 7.64 7.23 14.47 10.77 15.21 24.31 25.81 32.61 8.90 24.10 21.60 11.81 16.94 9.33 8.22 2.33 0.00 29 E4a_E5a KnownJunction 0 33.93 3.22 23.39 32.46 13.58 15.84 12.81 35.65 62.53 26.62 38.22 6.30 58.92 70.40 117.93 68.79 52.55 31.79 15.91 40.78 16.12 8.33 24.41 30 E4a_E6a KnownJunction 0 0.00 3.35 7.54 0.00 3.74 11.92 0.00 0.00 2.95 1.40 2.21 5.55 0.00 7.36 13.35 19.23 18.61 4.19 0.00 0.00 8.40 2.94 14.60 31 I4 Intron 0 10.26 1.36 5.19 6.45 5.37 4.91 5.76 7.75 10.77 8.29 6.79 4.17 3.92 22.36 35.79 21.38 25.94 14.59 6.39 5.34 2.58 1.39 2.95 32 I4_SR1 SilentIntronRegion 0 10.33 1.37 5.23 6.50 5.40 4.94 5.79 7.80 10.84 8.34 6.83 4.20 3.95 22.51 36.02 21.52 26.11 14.68 6.43 5.37 2.60 1.40 2.97 33 E5_Aa NovelBoundary 0 14.37 0.00 12.39 9.59 3.57 5.45 8.13 8.09 17.42 11.95 13.00 6.30 0.00 27.49 46.73 50.93 32.07 18.45 0.00 6.52 0.00 0.00 0.00 34 ER5a ExonRegion 0 34.18 7.08 16.98 26.84 19.84 25.66 10.97 35.28 62.29 26.51 30.24 17.92 49.67 94.16 123.43 63.92 89.85 38.48 8.07 27.29 20.07 9.17 15.61 35 E5_Da NovelBoundary 0 0.00 0.00 12.15 2.06 7.64 24.93 4.11 1.85 13.69 5.69 0.00 0.00 5.84 22.37 49.57 24.01 30.86 17.08 4.61 8.69 5.99 0.00 0.00 36 E5a_E6a KnownJunction 0 60.16 12.37 10.79 18.78 35.48 17.26 3.80 26.33 42.74 23.40 23.74 6.90 12.50 48.74 72.56 65.20 81.16 3.61 0.00 2.68 27.18 3.12 10.59 37 I5 Intron 0 26.25 3.34 10.00 15.81 11.75 6.92 5.14 13.88 22.05 13.34 14.79 11.86 41.47 37.58 65.31 37.32 39.69 22.45 6.36 10.38 6.89 5.13 5.41 38 I5_SR1 SilentIntronRegion 0 26.72 2.50 8.84 12.75 8.79 5.32 4.04 12.07 17.22 11.31 11.38 6.75 24.26 33.82 57.28 29.91 36.62 19.23 5.66 8.86 6.40 4.23 3.78 39 I5_AR1 ActiveIntronRegion 0 26.33 4.70 12.23 20.97 16.80 9.53 7.06 17.02 30.22 16.85 20.53 20.16 69.01 44.47 79.83 50.17 45.51 26.94 7.76 13.13 7.92 6.53 7.68 40 I5_SR2 SilentIntronRegion 0 13.74 1.76 2.64 7.25 2.22 3.56 0.95 7.63 7.74 6.51 5.29 2.21 15.84 18.60 26.99 10.21 21.11 29.53 0.84 3.13 2.20 4.64 8.70 41 E6_Aa NovelBoundary 0 12.74 12.17 13.54 28.43 23.09 26.46 9.49 18.32 53.01 23.77 13.85 0.00 6.82 30.67 71.08 49.99 34.22 27.28 8.56 14.32 17.42 7.84 7.09 42 ER6a ExonRegion 0 32.79 5.39 20.00 20.83 19.05 24.10 10.72 32.02 62.96 26.00 32.89 11.08 46.05 114.74 154.07 86.26 82.88 47.46 14.43 17.72 17.36 9.06 17.71 43 E6a_E7a KnownJunction 0 70.31 10.06 29.36 37.06 7.47 18.63 11.97 29.86 96.50 26.51 41.69 5.55 27.76 118.78 126.58 74.42 85.09 52.98 3.48 29.59 19.34 19.66 7.94 44 E7_Ab NovelBoundary 0 46.60 17.50 18.83 37.76 24.28 11.41 9.63 50.32 85.91 25.57 39.85 6.15 6.33 97.12 126.58 81.60 67.98 53.06 16.85 29.21 17.85 15.12 16.22 45 ER7a ExonRegion 0 44.37 10.87 19.98 31.56 4.84 14.46 8.76 31.71 80.19 23.25 38.14 4.33 22.37 98.13 134.91 77.05 73.00 55.08 11.03 33.06 18.90 16.51 13.44 46 ER7b ExonRegion 1 37.39 12.54 19.81 33.39 6.69 11.00 6.62 34.28 76.17 23.89 41.56 4.33 14.85 88.24 139.74 88.17 58.87 68.06 12.74 31.56 16.90 14.58 17.62 47 ER7c ExonRegion 0 34.58 8.56 25.12 35.95 18.07 18.55 9.98 33.70 55.21 27.18 43.07 10.15 22.22 118.24 179.07 99.93 99.15 66.88 14.34 29.82 19.31 13.70 11.10 48 E7_Db KnownBoundary 0 84.09 11.45 16.41 44.12 12.82 10.11 5.52 27.31 44.59 23.58 47.01 11.85 0.00 75.99 101.37 86.39 84.43 37.60 0.00 21.09 17.79 8.94 13.23 49 ER7d ExonRegion 0 52.07 12.20 14.70 35.71 10.70 13.20 7.94 29.73 50.39 25.46 44.07 17.32 18.76 101.67 84.72 104.62 102.99 36.22 11.47 23.83 19.39 6.25 17.62 50 ER7e ExonRegion 0 56.64 11.92 19.39 40.09 13.10 17.64 8.58 35.11 48.60 19.42 40.06 22.39 33.15 102.38 127.56 120.52 64.20 42.82 16.48 19.88 12.61 6.90 21.27 51 ER7f ExonRegion 0 99.37 19.27 27.59 36.90 38.32 23.46 17.70 51.17 71.49 30.28 44.12 32.55 71.95 108.22 207.89 110.16 106.24 54.72 24.43 35.75 24.64 18.12 20.73